RNA–Protein interactions for RNA: ENST00000492361.1

TNFRSF1B-203, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best)

Gene TNFRSF1B, Length 3,583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-203ENST00000492361 KRTAP10-8P60410 259 aa7.91□□□□□ -1.14
TNFRSF1B-203ENST00000492361 S4R3F8 94 aa7.9□□□□□ -1.14
TNFRSF1B-203ENST00000492361 KRTAP10-4P60372 401 aaPredicted RBP7.9□□□□□ -1.15
TNFRSF1B-203ENST00000492361 KIAA1109Q2LD37 5005 aa7.86□□□□□ -1.15
TNFRSF1B-203ENST00000492361 XP32Q5T750 250 aa7.85□□□□□ -1.15
TNFRSF1B-203ENST00000492361 P0C880 135 aa7.82□□□□□ -1.16
TNFRSF1B-203ENST00000492361 RPL37P61927 97 aaKnown RBP7.81□□□□□ -1.16
TNFRSF1B-203ENST00000492361 C10orf95Q9H7T3 257 aa7.78□□□□□ -1.16
TNFRSF1B-203ENST00000492361 KRTAP25-1Q3LHN0 102 aa7.76□□□□□ -1.17
TNFRSF1B-203ENST00000492361 KRTAP13-4Q3LI77 160 aa7.76□□□□□ -1.17
TNFRSF1B-203ENST00000492361 RYR1P21817 5038 aa7.74□□□□□ -1.17
TNFRSF1B-203ENST00000492361 HSPG2P98160 4391 aa7.72□□□□□ -1.17
TNFRSF1B-203ENST00000492361 RYR3Q15413 4870 aa7.71□□□□□ -1.17
TNFRSF1B-203ENST00000492361 ROMO1P60602 79 aa7.7□□□□□ -1.18
TNFRSF1B-203ENST00000492361 RYR2Q92736 4967 aa7.68□□□□□ -1.18
TNFRSF1B-203ENST00000492361 KRTAP17-1Q9BYP8 105 aa7.68□□□□□ -1.18
TNFRSF1B-203ENST00000492361 KRTAP21-3Q3LHN1 58 aa7.66□□□□□ -1.18
TNFRSF1B-203ENST00000492361 KRTAP10-6P60371 365 aaPredicted RBP7.66□□□□□ -1.18
TNFRSF1B-203ENST00000492361 KRTAP3-3Q9BYR6 98 aa7.66□□□□□ -1.18
TNFRSF1B-203ENST00000492361 H3BS24 57 aa7.65□□□□□ -1.18
TNFRSF1B-203ENST00000492361 J3QL48 77 aa7.65□□□□□ -1.18
TNFRSF1B-203ENST00000492361 LRP2P98164 4655 aa7.65□□□□□ -1.18
TNFRSF1B-203ENST00000492361 PKHD1L1Q86WI1 4243 aa7.62□□□□□ -1.19
TNFRSF1B-203ENST00000492361 M0QZ58 72 aa7.59□□□□□ -1.2
TNFRSF1B-203ENST00000492361 KRTAP12-2P59991 146 aa7.56□□□□□ -1.2
TNFRSF1B-203ENST00000492361 LPAP08519 4548 aa7.56□□□□□ -1.2
TNFRSF1B-203ENST00000492361 KRTAP4-5Q9BYR2 181 aa7.55□□□□□ -1.2
TNFRSF1B-203ENST00000492361 KRTAP3-2Q9BYR7 98 aa7.55□□□□□ -1.2
TNFRSF1B-203ENST00000492361 R4GN34 69 aa7.55□□□□□ -1.2
TNFRSF1B-203ENST00000492361 MT1HL1P0DM35 61 aa7.54□□□□□ -1.2
TNFRSF1B-203ENST00000492361 TPRXLQ17RH7 258 aa7.48□□□□□ -1.21
TNFRSF1B-203ENST00000492361 TNXBP22105 4242 aa7.41□□□□□ -1.22
TNFRSF1B-203ENST00000492361 EPPK1P58107 5090 aaKnown RBP7.39□□□□□ -1.23
TNFRSF1B-203ENST00000492361 KRTAP12-1P59990 96 aa7.38□□□□□ -1.23
TNFRSF1B-203ENST00000492361 ABCA13Q86UQ4 5058 aa7.37□□□□□ -1.23
TNFRSF1B-203ENST00000492361 SEC61BP60468 96 aaKnown RBP7.34□□□□□ -1.23
TNFRSF1B-203ENST00000492361 CAMK2N1Q7Z7J9 78 aa7.34□□□□□ -1.23
TNFRSF1B-203ENST00000492361 NDUFAF8A1L188 74 aa7.3□□□□□ -1.24
TNFRSF1B-203ENST00000492361 MUC2Q02817 5179 aa7.29□□□□□ -1.24
TNFRSF1B-203ENST00000492361 LORP23490 312 aaPredicted RBP7.26□□□□□ -1.25
TNFRSF1B-203ENST00000492361 KRTAP4-1Q9BYQ7 146 aa7.17□□□□□ -1.26
TNFRSF1B-203ENST00000492361 M0R2T5 61 aa7.13□□□□□ -1.27
TNFRSF1B-203ENST00000492361 HERC2O95714 4834 aa7.13□□□□□ -1.27
TNFRSF1B-203ENST00000492361 FAT4Q6V0I7 4981 aa6.93□□□□□ -1.3
TNFRSF1B-203ENST00000492361 HERC1Q15751 4861 aa6.92□□□□□ -1.3
TNFRSF1B-203ENST00000492361 PLAC4Q8WY50 150 aa6.92□□□□□ -1.3
TNFRSF1B-203ENST00000492361 KRTAP15-1Q3LI76 137 aa6.91□□□□□ -1.3
TNFRSF1B-203ENST00000492361 RNF213Q63HN8 5207 aa6.88□□□□□ -1.31
TNFRSF1B-203ENST00000492361 LUZP6Q538Z0 58 aa6.84□□□□□ -1.31
TNFRSF1B-203ENST00000492361 TNP1P09430 55 aa6.76□□□□□ -1.33
TNFRSF1B-203ENST00000492361 MUC17Q685J3 4493 aa6.71□□□□□ -1.33
TNFRSF1B-203ENST00000492361 KRTAP10-10P60014 251 aa6.7□□□□□ -1.34
TNFRSF1B-203ENST00000492361 A0A0A0MQY5 61 aa6.7□□□□□ -1.34
TNFRSF1B-203ENST00000492361 PCLOQ9Y6V0 5065 aa6.69□□□□□ -1.34
TNFRSF1B-203ENST00000492361 UBR4Q5T4S7 5183 aa6.63□□□□□ -1.35
TNFRSF1B-203ENST00000492361 KRTAP19-2Q3LHN2 52 aa6.58□□□□□ -1.36
TNFRSF1B-203ENST00000492361 PP632Q6XCG6 107 aa6.57□□□□□ -1.36
TNFRSF1B-203ENST00000492361 BIRC6Q9NR09 4857 aa6.52□□□□□ -1.37
TNFRSF1B-203ENST00000492361 HMCN2Q8NDA2 5059 aa6.51□□□□□ -1.37
TNFRSF1B-203ENST00000492361 FLGP20930 4061 aaPredicted RBP6.5□□□□□ -1.37
TNFRSF1B-203ENST00000492361 LCE3AQ5TA76 89 aa6.36□□□□□ -1.39
TNFRSF1B-203ENST00000492361 LCE2CQ5TA81 110 aa6.36□□□□□ -1.39
TNFRSF1B-203ENST00000492361 MT1HP80294 61 aa6.35□□□□□ -1.39
TNFRSF1B-203ENST00000492361 MT1FP04733 61 aa6.34□□□□□ -1.39
TNFRSF1B-203ENST00000492361 KRTAP19-1Q8IUB9 90 aa6.33□□□□□ -1.4
TNFRSF1B-203ENST00000492361 MT2AP02795 61 aa6.28□□□□□ -1.4
TNFRSF1B-203ENST00000492361 SPRR2GQ9BYE4 73 aa6.22□□□□□ -1.41
TNFRSF1B-203ENST00000492361 USH2AO75445 5202 aa6.21□□□□□ -1.42
TNFRSF1B-203ENST00000492361 FSIP2Q5CZC0 6907 aa6.19□□□□□ -1.42
TNFRSF1B-203ENST00000492361 KRTAP9-8Q9BYQ0 159 aa6.1□□□□□ -1.43
TNFRSF1B-203ENST00000492361 KMT2DO14686 5537 aa6.08□□□□□ -1.44
TNFRSF1B-203ENST00000492361 KRTAP10-12P60413 245 aa6.08□□□□□ -1.44
TNFRSF1B-203ENST00000492361 KRTAP12-3P60328 96 aa6.03□□□□□ -1.44
TNFRSF1B-203ENST00000492361 KRTAP10-7P60409 375 aaPredicted RBP6.01□□□□□ -1.45
TNFRSF1B-203ENST00000492361 MT1BP07438 61 aa5.99□□□□□ -1.45
TNFRSF1B-203ENST00000492361 MT1XP80297 61 aa5.97□□□□□ -1.45
TNFRSF1B-203ENST00000492361 KRTAP10-5P60370 271 aa5.96□□□□□ -1.45
TNFRSF1B-203ENST00000492361 PRO2289Q9P1D8 64 aa5.95□□□□□ -1.46
TNFRSF1B-203ENST00000492361 KRTAP23-1A1A580 65 aa5.94□□□□□ -1.46
TNFRSF1B-203ENST00000492361 KRTAP19-8Q3LI54 63 aa5.86□□□□□ -1.47
TNFRSF1B-203ENST00000492361 KRTAP8-1Q8IUC2 63 aa5.84□□□□□ -1.47
TNFRSF1B-203ENST00000492361 KRTAP4-8A0A0G2JLE6 195 aa5.82□□□□□ -1.48
TNFRSF1B-203ENST00000492361 KRTAP9-3Q9BYQ3 159 aa5.82□□□□□ -1.48
TNFRSF1B-203ENST00000492361 KRTAP4-8Q9BYQ9 185 aa5.82□□□□□ -1.48
TNFRSF1B-203ENST00000492361 SPRR5A0A1B0GTR4 108 aa5.81□□□□□ -1.48
TNFRSF1B-203ENST00000492361 KRTAP19-5Q3LI72 72 aa5.78□□□□□ -1.48
TNFRSF1B-203ENST00000492361 LCE2BO14633 110 aa5.74□□□□□ -1.49
TNFRSF1B-203ENST00000492361 KRTAP4-7Q9BYR0 210 aa5.64□□□□□ -1.51
TNFRSF1B-203ENST00000492361 DSTQ03001 7570 aaKnown RBP5.62□□□□□ -1.51
TNFRSF1B-203ENST00000492361 LCE2DQ5TA82 110 aaPredicted RBP5.59□□□□□ -1.51
TNFRSF1B-203ENST00000492361 CRCT1Q9UGL9 99 aa5.59□□□□□ -1.51
TNFRSF1B-203ENST00000492361 LCE3CQ5T5A8 94 aa5.54□□□□□ -1.52
TNFRSF1B-203ENST00000492361 OBSCNQ5VST9 7968 aa5.5□□□□□ -1.53
TNFRSF1B-203ENST00000492361 FCGBPQ9Y6R7 5405 aaPredicted RBP5.47□□□□□ -1.53
TNFRSF1B-203ENST00000492361 SYNE1Q8NF91 8797 aaKnown RBP5.43□□□□□ -1.54
TNFRSF1B-203ENST00000492361 MUC12Q9UKN1 5478 aa5.4□□□□□ -1.55
TNFRSF1B-203ENST00000492361 KRTAP9-6A8MVA2 160 aa5.36□□□□□ -1.55
TNFRSF1B-203ENST00000492361 INE1O15225 51 aa5.36□□□□□ -1.55
TNFRSF1B-203ENST00000492361 LCE2AQ5TA79 106 aaPredicted RBP5.34□□□□□ -1.56
TNFRSF1B-203ENST00000492361 SSPOA2VEC9 5147 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms