RNA–Protein interactions for RNA: ENST00000489816.5

BRD9-208, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-208ENST00000489816 KRTAP10-8P60410 259 aa8.21□□□□□ -1.09
BRD9-208ENST00000489816 COX6B2Q6YFQ2 88 aa8.2□□□□□ -1.1
BRD9-208ENST00000489816 LPAP08519 4548 aa8.2□□□□□ -1.1
BRD9-208ENST00000489816 A0A1B0GU33 70 aa8.19□□□□□ -1.1
BRD9-208ENST00000489816 RYR1P21817 5038 aa8.18□□□□□ -1.1
BRD9-208ENST00000489816 LRP2P98164 4655 aa8.15□□□□□ -1.11
BRD9-208ENST00000489816 XP32Q5T750 250 aa8.14□□□□□ -1.11
BRD9-208ENST00000489816 EPPK1P58107 5090 aaKnown RBP8.12□□□□□ -1.11
BRD9-208ENST00000489816 H1FX-AS1Q4G0G2 97 aa8.1□□□□□ -1.11
BRD9-208ENST00000489816 RPL37P61927 97 aaKnown RBP8.09□□□□□ -1.11
BRD9-208ENST00000489816 CSAG1Q6PB30 78 aa8.08□□□□□ -1.12
BRD9-208ENST00000489816 CRIPTQ9P021 101 aa8.06□□□□□ -1.12
BRD9-208ENST00000489816 A0A0D9SG42 100 aa8.05□□□□□ -1.12
BRD9-208ENST00000489816 ABCA13Q86UQ4 5058 aa8.03□□□□□ -1.12
BRD9-208ENST00000489816 MT1HL1P0DM35 61 aa8.03□□□□□ -1.12
BRD9-208ENST00000489816 KRTAP3-3Q9BYR6 98 aa8.03□□□□□ -1.12
BRD9-208ENST00000489816 S4R3F8 94 aa7.96□□□□□ -1.13
BRD9-208ENST00000489816 KRTAP4-5Q9BYR2 181 aa7.96□□□□□ -1.14
BRD9-208ENST00000489816 KRTAP13-4Q3LI77 160 aa7.96□□□□□ -1.14
BRD9-208ENST00000489816 KRTAP10-6P60371 365 aaPredicted RBP7.94□□□□□ -1.14
BRD9-208ENST00000489816 P0C880 135 aa7.94□□□□□ -1.14
BRD9-208ENST00000489816 LINC01554Q52M75 96 aa7.89□□□□□ -1.15
BRD9-208ENST00000489816 KRTAP3-2Q9BYR7 98 aa7.88□□□□□ -1.15
BRD9-208ENST00000489816 K7ERS5 55 aa7.84□□□□□ -1.15
BRD9-208ENST00000489816 MUC2Q02817 5179 aa7.74□□□□□ -1.17
BRD9-208ENST00000489816 SPINT4Q6UDR6 99 aa7.73□□□□□ -1.17
BRD9-208ENST00000489816 KRTAP25-1Q3LHN0 102 aa7.73□□□□□ -1.17
BRD9-208ENST00000489816 TPRXLQ17RH7 258 aa7.72□□□□□ -1.17
BRD9-208ENST00000489816 KRTAP12-2P59991 146 aa7.68□□□□□ -1.18
BRD9-208ENST00000489816 ROMO1P60602 79 aa7.66□□□□□ -1.18
BRD9-208ENST00000489816 HERC2O95714 4834 aa7.66□□□□□ -1.18
BRD9-208ENST00000489816 C10orf95Q9H7T3 257 aa7.66□□□□□ -1.18
BRD9-208ENST00000489816 J3QL48 77 aa7.63□□□□□ -1.19
BRD9-208ENST00000489816 KRTAP4-1Q9BYQ7 146 aa7.58□□□□□ -1.2
BRD9-208ENST00000489816 KRTAP12-1P59990 96 aa7.55□□□□□ -1.2
BRD9-208ENST00000489816 M0QZ58 72 aa7.53□□□□□ -1.2
BRD9-208ENST00000489816 MUC17Q685J3 4493 aa7.5□□□□□ -1.21
BRD9-208ENST00000489816 LORP23490 312 aaPredicted RBP7.5□□□□□ -1.21
BRD9-208ENST00000489816 SEC61BP60468 96 aaKnown RBP7.49□□□□□ -1.21
BRD9-208ENST00000489816 R4GN34 69 aa7.47□□□□□ -1.21
BRD9-208ENST00000489816 HERC1Q15751 4861 aa7.46□□□□□ -1.22
BRD9-208ENST00000489816 FAT4Q6V0I7 4981 aa7.35□□□□□ -1.23
BRD9-208ENST00000489816 PCLOQ9Y6V0 5065 aa7.32□□□□□ -1.24
BRD9-208ENST00000489816 KRTAP19-2Q3LHN2 52 aa7.24□□□□□ -1.25
BRD9-208ENST00000489816 RNF213Q63HN8 5207 aa7.23□□□□□ -1.25
BRD9-208ENST00000489816 BIRC6Q9NR09 4857 aa7.21□□□□□ -1.25
BRD9-208ENST00000489816 H3BS24 57 aa7.2□□□□□ -1.26
BRD9-208ENST00000489816 CAMK2N1Q7Z7J9 78 aa7.14□□□□□ -1.27
BRD9-208ENST00000489816 HMCN2Q8NDA2 5059 aa7.1□□□□□ -1.27
BRD9-208ENST00000489816 FLGP20930 4061 aaPredicted RBP7.09□□□□□ -1.28
BRD9-208ENST00000489816 UBR4Q5T4S7 5183 aa7.06□□□□□ -1.28
BRD9-208ENST00000489816 NDUFAF8A1L188 74 aa7□□□□□ -1.29
BRD9-208ENST00000489816 KRTAP15-1Q3LI76 137 aa7□□□□□ -1.29
BRD9-208ENST00000489816 M0R2T5 61 aa6.98□□□□□ -1.29
BRD9-208ENST00000489816 LCE2CQ5TA81 110 aa6.9□□□□□ -1.31
BRD9-208ENST00000489816 PLAC4Q8WY50 150 aa6.82□□□□□ -1.32
BRD9-208ENST00000489816 MT1HP80294 61 aa6.74□□□□□ -1.33
BRD9-208ENST00000489816 KRTAP10-10P60014 251 aa6.73□□□□□ -1.33
BRD9-208ENST00000489816 TNP1P09430 55 aa6.72□□□□□ -1.33
BRD9-208ENST00000489816 KRTAP19-1Q8IUB9 90 aa6.72□□□□□ -1.33
BRD9-208ENST00000489816 MT1FP04733 61 aa6.67□□□□□ -1.34
BRD9-208ENST00000489816 PP632Q6XCG6 107 aa6.64□□□□□ -1.35
BRD9-208ENST00000489816 MT2AP02795 61 aa6.62□□□□□ -1.35
BRD9-208ENST00000489816 SPRR2GQ9BYE4 73 aa6.62□□□□□ -1.35
BRD9-208ENST00000489816 KRTAP9-8Q9BYQ0 159 aa6.56□□□□□ -1.36
BRD9-208ENST00000489816 LUZP6Q538Z0 58 aa6.49□□□□□ -1.37
BRD9-208ENST00000489816 USH2AO75445 5202 aa6.48□□□□□ -1.37
BRD9-208ENST00000489816 LCE3AQ5TA76 89 aa6.47□□□□□ -1.37
BRD9-208ENST00000489816 A0A0A0MQY5 61 aa6.37□□□□□ -1.39
BRD9-208ENST00000489816 MT1BP07438 61 aa6.37□□□□□ -1.39
BRD9-208ENST00000489816 KRTAP10-5P60370 271 aa6.31□□□□□ -1.4
BRD9-208ENST00000489816 MT1XP80297 61 aa6.31□□□□□ -1.4
BRD9-208ENST00000489816 KMT2DO14686 5537 aa6.3□□□□□ -1.4
BRD9-208ENST00000489816 KRTAP19-8Q3LI54 63 aa6.3□□□□□ -1.4
BRD9-208ENST00000489816 KRTAP23-1A1A580 65 aa6.28□□□□□ -1.4
BRD9-208ENST00000489816 KRTAP9-3Q9BYQ3 159 aa6.26□□□□□ -1.41
BRD9-208ENST00000489816 KRTAP10-7P60409 375 aaPredicted RBP6.24□□□□□ -1.41
BRD9-208ENST00000489816 KRTAP10-12P60413 245 aa6.18□□□□□ -1.42
BRD9-208ENST00000489816 FSIP2Q5CZC0 6907 aa6.16□□□□□ -1.42
BRD9-208ENST00000489816 SPRR5A0A1B0GTR4 108 aa6.15□□□□□ -1.42
BRD9-208ENST00000489816 LCE2BO14633 110 aa6.12□□□□□ -1.43
BRD9-208ENST00000489816 KRTAP8-1Q8IUC2 63 aa6.12□□□□□ -1.43
BRD9-208ENST00000489816 KRTAP12-3P60328 96 aa6.12□□□□□ -1.43
BRD9-208ENST00000489816 PRO2289Q9P1D8 64 aa6.01□□□□□ -1.45
BRD9-208ENST00000489816 KRTAP4-8A0A0G2JLE6 195 aa5.99□□□□□ -1.45
BRD9-208ENST00000489816 KRTAP4-8Q9BYQ9 185 aa5.99□□□□□ -1.45
BRD9-208ENST00000489816 KRTAP19-5Q3LI72 72 aa5.93□□□□□ -1.46
BRD9-208ENST00000489816 LCE2AQ5TA79 106 aaPredicted RBP5.92□□□□□ -1.46
BRD9-208ENST00000489816 SSPOA2VEC9 5147 aa5.74□□□□□ -1.49
BRD9-208ENST00000489816 KRTAP4-7Q9BYR0 210 aa5.74□□□□□ -1.49
BRD9-208ENST00000489816 LCE3CQ5T5A8 94 aa5.7□□□□□ -1.5
BRD9-208ENST00000489816 KRTAP19-7Q3SYF9 63 aa5.62□□□□□ -1.51
BRD9-208ENST00000489816 KRTAP9-6A8MVA2 160 aa5.61□□□□□ -1.51
BRD9-208ENST00000489816 MUC12Q9UKN1 5478 aa5.57□□□□□ -1.52
BRD9-208ENST00000489816 LCE2DQ5TA82 110 aaPredicted RBP5.55□□□□□ -1.52
BRD9-208ENST00000489816 FCGBPQ9Y6R7 5405 aaPredicted RBP5.54□□□□□ -1.52
BRD9-208ENST00000489816 DSTQ03001 7570 aaKnown RBP5.52□□□□□ -1.53
BRD9-208ENST00000489816 MT1EP04732 61 aa5.43□□□□□ -1.54
BRD9-208ENST00000489816 MT1LQ93083 61 aa5.43□□□□□ -1.54
BRD9-208ENST00000489816 KRTAP4-3Q9BYR4 195 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms