RNA–Protein interactions for RNA: ENST00000489333.1

GABRE-210, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 2

Gene GABRE, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-210ENST00000489333 CDC42SE1Q9NRR8 79 aa4.97□□□□□ -1.61
GABRE-210ENST00000489333 LRP1Q07954 4544 aaKnown RBP4.97□□□□□ -1.61
GABRE-210ENST00000489333 A0A087X002 238 aa4.96□□□□□ -1.62
GABRE-210ENST00000489333 IGKV2-30P06310 120 aa4.96□□□□□ -1.62
GABRE-210ENST00000489333 NOTCH2NLQ7Z3S9 236 aa4.96□□□□□ -1.62
GABRE-210ENST00000489333 PKHD1L1Q86WI1 4243 aa4.96□□□□□ -1.62
GABRE-210ENST00000489333 PMAIP1Q13794 54 aa4.95□□□□□ -1.62
GABRE-210ENST00000489333 Q5W150 140 aa4.95□□□□□ -1.62
GABRE-210ENST00000489333 HMCN2Q8NDA2 5059 aa4.95□□□□□ -1.62
GABRE-210ENST00000489333 KRTAP13-2Q52LG2 175 aa4.94□□□□□ -1.62
GABRE-210ENST00000489333 LCE5AQ5TCM9 118 aa4.94□□□□□ -1.62
GABRE-210ENST00000489333 TYMSOSQ8TAI1 123 aa4.94□□□□□ -1.62
GABRE-210ENST00000489333 UBR4Q5T4S7 5183 aa4.93□□□□□ -1.62
GABRE-210ENST00000489333 KRTAP4-2Q9BYR5 136 aa4.93□□□□□ -1.62
GABRE-210ENST00000489333 KRTAP1-4P0C5Y4 121 aa4.92□□□□□ -1.62
GABRE-210ENST00000489333 KRTAP16-1A8MUX0 517 aa4.91□□□□□ -1.62
GABRE-210ENST00000489333 KRTAP4-11Q9BYQ6 195 aa4.91□□□□□ -1.62
GABRE-210ENST00000489333 KRTAP3-1Q9BYR8 98 aa4.91□□□□□ -1.62
GABRE-210ENST00000489333 KRTAP10-4P60372 401 aaPredicted RBP4.9□□□□□ -1.63
GABRE-210ENST00000489333 SPTSSBQ8NFR3 76 aa4.9□□□□□ -1.63
GABRE-210ENST00000489333 LINC00304Q8N9R0 145 aa4.88□□□□□ -1.63
GABRE-210ENST00000489333 A0A1B0GU69 56 aa4.87□□□□□ -1.63
GABRE-210ENST00000489333 C7orf65Q6ZTY9 151 aa4.87□□□□□ -1.63
GABRE-210ENST00000489333 IGKV2D-30A0A075B6S6 120 aa4.86□□□□□ -1.63
GABRE-210ENST00000489333 KTN1-AS1Q86SY8 53 aa4.86□□□□□ -1.63
GABRE-210ENST00000489333 LCA10Q71F78 164 aa4.85□□□□□ -1.63
GABRE-210ENST00000489333 UQCR11O14957 56 aa4.82□□□□□ -1.64
GABRE-210ENST00000489333 SEC61GP60059 68 aa4.82□□□□□ -1.64
GABRE-210ENST00000489333 TNXBP22105 4242 aa4.82□□□□□ -1.64
GABRE-210ENST00000489333 A6NN06 94 aa4.81□□□□□ -1.64
GABRE-210ENST00000489333 MT1HL1P0DM35 61 aa4.79□□□□□ -1.64
GABRE-210ENST00000489333 SPINK7P58062 85 aa4.79□□□□□ -1.64
GABRE-210ENST00000489333 SPATA8Q6RVD6 105 aa4.79□□□□□ -1.64
GABRE-210ENST00000489333 C20orf166-AS1Q96NR2 134 aa4.79□□□□□ -1.64
GABRE-210ENST00000489333 A8MUU9 505 aa4.78□□□□□ -1.64
GABRE-210ENST00000489333 LRP2P98164 4655 aa4.76□□□□□ -1.65
GABRE-210ENST00000489333 MIR22HGQ0VDD5 57 aa4.75□□□□□ -1.65
GABRE-210ENST00000489333 RETNLBQ9BQ08 111 aa4.75□□□□□ -1.65
GABRE-210ENST00000489333 RNF213Q63HN8 5207 aa4.74□□□□□ -1.65
GABRE-210ENST00000489333 A8MU10 97 aa4.71□□□□□ -1.66
GABRE-210ENST00000489333 LPAP08519 4548 aa4.66□□□□□ -1.66
GABRE-210ENST00000489333 KRTAP10-8P60410 259 aa4.65□□□□□ -1.67
GABRE-210ENST00000489333 COX6B2Q6YFQ2 88 aa4.64□□□□□ -1.67
GABRE-210ENST00000489333 RBM12B-AS1Q9P1G2 102 aa4.63□□□□□ -1.67
GABRE-210ENST00000489333 KRTAP23-1A1A580 65 aa4.62□□□□□ -1.67
GABRE-210ENST00000489333 C9orf92A6NGG3 77 aa4.61□□□□□ -1.67
GABRE-210ENST00000489333 K7ERS5 55 aa4.61□□□□□ -1.67
GABRE-210ENST00000489333 A0A1B0GU33 70 aa4.6□□□□□ -1.67
GABRE-210ENST00000489333 H1FX-AS1Q4G0G2 97 aa4.57□□□□□ -1.68
GABRE-210ENST00000489333 RPL37P61927 97 aaKnown RBP4.56□□□□□ -1.68
GABRE-210ENST00000489333 MUC2Q02817 5179 aa4.52□□□□□ -1.69
GABRE-210ENST00000489333 H0YAA0 97 aa4.49□□□□□ -1.69
GABRE-210ENST00000489333 LINC01554Q52M75 96 aa4.48□□□□□ -1.69
GABRE-210ENST00000489333 S4R3F8 94 aa4.46□□□□□ -1.7
GABRE-210ENST00000489333 MUC17Q685J3 4493 aa4.45□□□□□ -1.7
GABRE-210ENST00000489333 FAT4Q6V0I7 4981 aa4.44□□□□□ -1.7
GABRE-210ENST00000489333 TPRXLQ17RH7 258 aa4.42□□□□□ -1.7
GABRE-210ENST00000489333 PRAC1Q96KF2 57 aa4.42□□□□□ -1.7
GABRE-210ENST00000489333 KRTAP15-1Q3LI76 137 aa4.41□□□□□ -1.7
GABRE-210ENST00000489333 CSAG1Q6PB30 78 aa4.4□□□□□ -1.71
GABRE-210ENST00000489333 ADM2Q7Z4H4 148 aa4.38□□□□□ -1.71
GABRE-210ENST00000489333 KRTAP25-1Q3LHN0 102 aa4.37□□□□□ -1.71
GABRE-210ENST00000489333 ROMO1P60602 79 aa4.36□□□□□ -1.71
GABRE-210ENST00000489333 M0QZ58 72 aa4.35□□□□□ -1.71
GABRE-210ENST00000489333 KRTAP10-6P60371 365 aaPredicted RBP4.35□□□□□ -1.71
GABRE-210ENST00000489333 SEC61BP60468 96 aaKnown RBP4.3□□□□□ -1.72
GABRE-210ENST00000489333 CRIPTQ9P021 101 aa4.23□□□□□ -1.73
GABRE-210ENST00000489333 P0C880 135 aa4.22□□□□□ -1.73
GABRE-210ENST00000489333 KRTAP5-3Q6L8H2 238 aa4.22□□□□□ -1.73
GABRE-210ENST00000489333 KRTAP4-1Q9BYQ7 146 aa4.22□□□□□ -1.73
GABRE-210ENST00000489333 A0A0D9SG42 100 aa4.21□□□□□ -1.74
GABRE-210ENST00000489333 KRTAP13-4Q3LI77 160 aa4.21□□□□□ -1.74
GABRE-210ENST00000489333 FSIP2Q5CZC0 6907 aa4.18□□□□□ -1.74
GABRE-210ENST00000489333 KRTAP12-1P59990 96 aa4.16□□□□□ -1.74
GABRE-210ENST00000489333 SPINT4Q6UDR6 99 aa4.14□□□□□ -1.75
GABRE-210ENST00000489333 CRCT1Q9UGL9 99 aa4.14□□□□□ -1.75
GABRE-210ENST00000489333 R4GN34 69 aa4.14□□□□□ -1.75
GABRE-210ENST00000489333 KRTAP12-2P59991 146 aa4.13□□□□□ -1.75
GABRE-210ENST00000489333 MT1HP80294 61 aa4.1□□□□□ -1.75
GABRE-210ENST00000489333 KRTAP19-2Q3LHN2 52 aa4.09□□□□□ -1.75
GABRE-210ENST00000489333 M0R2T5 61 aa4.05□□□□□ -1.76
GABRE-210ENST00000489333 FLGP20930 4061 aaPredicted RBP4.04□□□□□ -1.76
GABRE-210ENST00000489333 PP632Q6XCG6 107 aa4.03□□□□□ -1.76
GABRE-210ENST00000489333 KRTAP9-8Q9BYQ0 159 aa3.97□□□□□ -1.77
GABRE-210ENST00000489333 C10orf95Q9H7T3 257 aa3.95□□□□□ -1.78
GABRE-210ENST00000489333 CAMK2N1Q7Z7J9 78 aa3.93□□□□□ -1.78
GABRE-210ENST00000489333 SSPOA2VEC9 5147 aa3.9□□□□□ -1.78
GABRE-210ENST00000489333 LCE1AQ5T7P2 110 aa3.9□□□□□ -1.79
GABRE-210ENST00000489333 USH2AO75445 5202 aa3.9□□□□□ -1.79
GABRE-210ENST00000489333 TNP1P09430 55 aa3.84□□□□□ -1.79
GABRE-210ENST00000489333 PLAC4Q8WY50 150 aa3.84□□□□□ -1.79
GABRE-210ENST00000489333 FCGBPQ9Y6R7 5405 aaPredicted RBP3.79□□□□□ -1.8
GABRE-210ENST00000489333 MT2AP02795 61 aa3.79□□□□□ -1.8
GABRE-210ENST00000489333 SPRR2GQ9BYE4 73 aa3.78□□□□□ -1.8
GABRE-210ENST00000489333 NDUFAF8A1L188 74 aa3.77□□□□□ -1.81
GABRE-210ENST00000489333 LUZP6Q538Z0 58 aa3.77□□□□□ -1.81
GABRE-210ENST00000489333 MT1FP04733 61 aa3.76□□□□□ -1.81
GABRE-210ENST00000489333 KRTAP10-10P60014 251 aa3.75□□□□□ -1.81
GABRE-210ENST00000489333 SYNE2Q8WXH0 6885 aaKnown RBP3.75□□□□□ -1.81
GABRE-210ENST00000489333 MACF1Q9UPN3 7388 aaKnown RBP3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms