RNA–Protein interactions for RNA: ENST00000488354.1

PSMD1-211, Transcript of proteasome 26S subunit, non-ATPase 1, humanhuman

TSL 3

Gene PSMD1, Length 659 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD1-211ENST00000488354 SETXQ7Z333 2677 aaKnown RBP1.83□□□□□ -2.12
PSMD1-211ENST00000488354 SETD2Q9BYW2 2564 aaPredicted RBP1.82□□□□□ -2.12
PSMD1-211ENST00000488354 SPRR1BP22528 89 aa1.82□□□□□ -2.12
PSMD1-211ENST00000488354 JMJD1CQ15652 2540 aa1.82□□□□□ -2.12
PSMD1-211ENST00000488354 TEP1Q99973 2627 aaKnown RBP1.8□□□□□ -2.12
PSMD1-211ENST00000488354 HIVEP1P15822 2718 aa1.8□□□□□ -2.12
PSMD1-211ENST00000488354 ITPR2Q14571 2701 aa1.8□□□□□ -2.12
PSMD1-211ENST00000488354 CRIPTQ9P021 101 aa1.8□□□□□ -2.12
PSMD1-211ENST00000488354 ZNF469Q96JG9 3925 aaPredicted RBP1.79□□□□□ -2.12
PSMD1-211ENST00000488354 GCN1Q92616 2671 aaKnown RBP1.79□□□□□ -2.12
PSMD1-211ENST00000488354 CUBNO60494 3623 aa1.79□□□□□ -2.12
PSMD1-211ENST00000488354 TP53AIP1Q9HCN2 124 aa1.79□□□□□ -2.12
PSMD1-211ENST00000488354 ATRQ13535 2644 aa1.79□□□□□ -2.12
PSMD1-211ENST00000488354 NBEAL2Q6ZNJ1 2754 aa1.79□□□□□ -2.12
PSMD1-211ENST00000488354 NBPF19A0A087WUL8 3843 aa1.79□□□□□ -2.12
PSMD1-211ENST00000488354 ANK3Q12955 4377 aaKnown RBP1.79□□□□□ -2.12
PSMD1-211ENST00000488354 OTOGQ6ZRI0 2925 aa1.78□□□□□ -2.12
PSMD1-211ENST00000488354 MRPL34Q9BQ48 92 aaKnown RBP1.77□□□□□ -2.13
PSMD1-211ENST00000488354 NF1P21359 2839 aa1.77□□□□□ -2.13
PSMD1-211ENST00000488354 AKAP9Q99996 3911 aa1.77□□□□□ -2.13
PSMD1-211ENST00000488354 MMP24-AS1A0A0U1RRL7 71 aa1.76□□□□□ -2.13
PSMD1-211ENST00000488354 SMR3BP02814 79 aaPredicted RBP1.76□□□□□ -2.13
PSMD1-211ENST00000488354 KRTAP21-3Q3LHN1 58 aa1.76□□□□□ -2.13
PSMD1-211ENST00000488354 NSD1Q96L73 2696 aaPredicted RBP1.76□□□□□ -2.13
PSMD1-211ENST00000488354 FLG2Q5D862 2391 aaPredicted RBP1.75□□□□□ -2.13
PSMD1-211ENST00000488354 SPINK1P00995 79 aa1.73□□□□□ -2.13
PSMD1-211ENST00000488354 TENM1Q9UKZ4 2725 aa1.72□□□□□ -2.13
PSMD1-211ENST00000488354 COX6B2Q6YFQ2 88 aa1.72□□□□□ -2.13
PSMD1-211ENST00000488354 Q6ZSA8 131 aa1.72□□□□□ -2.13
PSMD1-211ENST00000488354 MAST4O15021 2626 aa1.72□□□□□ -2.13
PSMD1-211ENST00000488354 FLNBO75369 2602 aaKnown RBP1.71□□□□□ -2.14
PSMD1-211ENST00000488354 STAB1Q9NY15 2570 aa1.71□□□□□ -2.14
PSMD1-211ENST00000488354 VWFP04275 2813 aa1.71□□□□□ -2.14
PSMD1-211ENST00000488354 NIPBLQ6KC79 2804 aaeCLIP1.71□□□□□ -2.14
PSMD1-211ENST00000488354 C9orf92A6NGG3 77 aa1.7□□□□□ -2.14
PSMD1-211ENST00000488354 COL6A5A8TX70 2615 aa1.69□□□□□ -2.14
PSMD1-211ENST00000488354 C10orf95Q9H7T3 257 aa1.69□□□□□ -2.14
PSMD1-211ENST00000488354 TENM3Q9P273 2699 aa1.69□□□□□ -2.14
PSMD1-211ENST00000488354 TRRAPQ9Y4A5 3859 aa1.68□□□□□ -2.14
PSMD1-211ENST00000488354 RPS29P62273 56 aaKnown RBP1.67□□□□□ -2.14
PSMD1-211ENST00000488354 NOTCH1P46531 2555 aa1.66□□□□□ -2.14
PSMD1-211ENST00000488354 MGAM2Q2M2H8 2515 aa1.65□□□□□ -2.15
PSMD1-211ENST00000488354 Q5VSD8 79 aa1.65□□□□□ -2.15
PSMD1-211ENST00000488354 PKD1L1Q8TDX9 2849 aa1.64□□□□□ -2.15
PSMD1-211ENST00000488354 NBEAL1Q6ZS30 2694 aa1.63□□□□□ -2.15
PSMD1-211ENST00000488354 HUWE1Q7Z6Z7 4374 aaKnown RBP1.63□□□□□ -2.15
PSMD1-211ENST00000488354 HMCN1Q96RW7 5635 aa1.62□□□□□ -2.15
PSMD1-211ENST00000488354 DNAH3Q8TD57 4116 aa1.62□□□□□ -2.15
PSMD1-211ENST00000488354 CMYA5Q8N3K9 4069 aa1.61□□□□□ -2.15
PSMD1-211ENST00000488354 ANK2Q01484 3957 aa1.6□□□□□ -2.15
PSMD1-211ENST00000488354 KRTAP10-4P60372 401 aaPredicted RBP1.59□□□□□ -2.15
PSMD1-211ENST00000488354 A0A0D9SG42 100 aa1.58□□□□□ -2.16
PSMD1-211ENST00000488354 STAB2Q8WWQ8 2551 aa1.58□□□□□ -2.16
PSMD1-211ENST00000488354 FCGBPQ9Y6R7 5405 aaPredicted RBP1.58□□□□□ -2.16
PSMD1-211ENST00000488354 TENM2Q9NT68 2774 aa1.57□□□□□ -2.16
PSMD1-211ENST00000488354 S4R3F8 94 aa1.57□□□□□ -2.16
PSMD1-211ENST00000488354 DNAH9Q9NYC9 4486 aa1.56□□□□□ -2.16
PSMD1-211ENST00000488354 COL7A1Q02388 2944 aa1.56□□□□□ -2.16
PSMD1-211ENST00000488354 FBN3Q75N90 2809 aa1.55□□□□□ -2.16
PSMD1-211ENST00000488354 H1FX-AS1Q4G0G2 97 aa1.55□□□□□ -2.16
PSMD1-211ENST00000488354 DNAH1Q9P2D7 4330 aa1.54□□□□□ -2.16
PSMD1-211ENST00000488354 DNAH7Q8WXX0 4024 aa1.54□□□□□ -2.16
PSMD1-211ENST00000488354 DYNC2H1Q8NCM8 4307 aaKnown RBP1.53□□□□□ -2.16
PSMD1-211ENST00000488354 STARD9Q9P2P6 4700 aa1.53□□□□□ -2.16
PSMD1-211ENST00000488354 MEGF8Q7Z7M0 2845 aa1.53□□□□□ -2.17
PSMD1-211ENST00000488354 ALMS1Q8TCU4 4167 aa1.52□□□□□ -2.17
PSMD1-211ENST00000488354 DNAH10Q8IVF4 4471 aa1.52□□□□□ -2.17
PSMD1-211ENST00000488354 MT1HL1P0DM35 61 aa1.52□□□□□ -2.17
PSMD1-211ENST00000488354 CSMD3Q7Z407 3707 aa1.52□□□□□ -2.17
PSMD1-211ENST00000488354 LYSTQ99698 3801 aa1.52□□□□□ -2.17
PSMD1-211ENST00000488354 SRRM2Q9UQ35 2752 aaKnown RBP1.52□□□□□ -2.17
PSMD1-211ENST00000488354 PLECQ15149 4684 aaKnown RBP1.51□□□□□ -2.17
PSMD1-211ENST00000488354 TGP01266 2768 aa1.51□□□□□ -2.17
PSMD1-211ENST00000488354 VPS13DQ5THJ4 4388 aa1.5□□□□□ -2.17
PSMD1-211ENST00000488354 H0YAA0 97 aa1.5□□□□□ -2.17
PSMD1-211ENST00000488354 KMT2AQ03164 3969 aa1.5□□□□□ -2.17
PSMD1-211ENST00000488354 PRKDCP78527 4128 aaKnown RBP1.47□□□□□ -2.17
PSMD1-211ENST00000488354 HECTD4Q9Y4D8 3996 aa1.47□□□□□ -2.17
PSMD1-211ENST00000488354 DNAH17Q9UFH2 4485 aa1.47□□□□□ -2.17
PSMD1-211ENST00000488354 DNAH6Q9C0G6 4158 aa1.47□□□□□ -2.17
PSMD1-211ENST00000488354 M0QZ58 72 aa1.46□□□□□ -2.18
PSMD1-211ENST00000488354 DNAH2Q9P225 4427 aa1.44□□□□□ -2.18
PSMD1-211ENST00000488354 M0R2T5 61 aa1.44□□□□□ -2.18
PSMD1-211ENST00000488354 FRAS1Q86XX4 4008 aa1.43□□□□□ -2.18
PSMD1-211ENST00000488354 HYDINQ4G0P3 5121 aa1.43□□□□□ -2.18
PSMD1-211ENST00000488354 DNAH8Q96JB1 4490 aa1.43□□□□□ -2.18
PSMD1-211ENST00000488354 PKD1P98161 4303 aa1.43□□□□□ -2.18
PSMD1-211ENST00000488354 DNAH11Q96DT5 4516 aa1.43□□□□□ -2.18
PSMD1-211ENST00000488354 DMBT1Q9UGM3 2413 aaPredicted RBP1.42□□□□□ -2.18
PSMD1-211ENST00000488354 FAT2Q9NYQ8 4349 aa1.42□□□□□ -2.18
PSMD1-211ENST00000488354 DNHD1Q96M86 4753 aa1.41□□□□□ -2.18
PSMD1-211ENST00000488354 DNAH5Q8TE73 4624 aa1.41□□□□□ -2.18
PSMD1-211ENST00000488354 LRP1BQ9NZR2 4599 aa1.4□□□□□ -2.18
PSMD1-211ENST00000488354 VPS13BQ7Z7G8 4022 aa1.4□□□□□ -2.19
PSMD1-211ENST00000488354 DYNC1H1Q14204 4646 aaKnown RBP1.38□□□□□ -2.19
PSMD1-211ENST00000488354 SACSQ9NZJ4 4579 aa1.38□□□□□ -2.19
PSMD1-211ENST00000488354 RYR2Q92736 4967 aa1.35□□□□□ -2.19
PSMD1-211ENST00000488354 PKHD1P08F94 4074 aa1.35□□□□□ -2.19
PSMD1-211ENST00000488354 APOBP04114 4563 aaKnown RBP1.34□□□□□ -2.19
PSMD1-211ENST00000488354 TNP1P09430 55 aa1.34□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms