RNA–Protein interactions for RNA: ENST00000486427.1

LTN1-206, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene LTN1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-206ENST00000486427 RRBP1Q9P2E9 1410 aaKnown RBP-0.98□□□□□ -2.57
LTN1-206ENST00000486427 MGAQ8IWI9 3026 aa-0.99□□□□□ -2.57
LTN1-206ENST00000486427 MADDQ8WXG6 1647 aa-0.99□□□□□ -2.57
LTN1-206ENST00000486427 DEFB114Q30KQ6 69 aa-0.99□□□□□ -2.57
LTN1-206ENST00000486427 NOP10Q9NPE3 64 aaKnown RBP-0.99□□□□□ -2.57
LTN1-206ENST00000486427 IQGAP3Q86VI3 1631 aa-1□□□□□ -2.57
LTN1-206ENST00000486427 DNMBPQ6XZF7 1577 aa-1□□□□□ -2.57
LTN1-206ENST00000486427 HILPDAQ9Y5L2 63 aa-1.01□□□□□ -2.57
LTN1-206ENST00000486427 A0A1B0GUL6 1792 aa-1.01□□□□□ -2.57
LTN1-206ENST00000486427 TRRAPQ9Y4A5 3859 aa-1.02□□□□□ -2.57
LTN1-206ENST00000486427 MT1EP04732 61 aa-1.02□□□□□ -2.57
LTN1-206ENST00000486427 ATXN8Q156A1 80 aa-1.02□□□□□ -2.57
LTN1-206ENST00000486427 ABCA9Q8IUA7 1624 aa-1.02□□□□□ -2.57
LTN1-206ENST00000486427 EYSQ5T1H1 3165 aa-1.02□□□□□ -2.57
LTN1-206ENST00000486427 COL6A5A8TX70 2615 aa-1.02□□□□□ -2.57
LTN1-206ENST00000486427 TIAM1Q13009 1591 aa-1.03□□□□□ -2.57
LTN1-206ENST00000486427 M0QY20 66 aa-1.05□□□□□ -2.58
LTN1-206ENST00000486427 CROCC2H7BZ55 1655 aa-1.05□□□□□ -2.58
LTN1-206ENST00000486427 MT1LQ93083 61 aa-1.06□□□□□ -2.58
LTN1-206ENST00000486427 MT1HL1P0DM35 61 aa-1.07□□□□□ -2.58
LTN1-206ENST00000486427 GNG13Q9P2W3 67 aa-1.07□□□□□ -2.58
LTN1-206ENST00000486427 UGGT2Q9NYU1 1516 aa-1.07□□□□□ -2.58
LTN1-206ENST00000486427 CFAP46Q8IYW2 2715 aa-1.08□□□□□ -2.58
LTN1-206ENST00000486427 LINC01546A6NGU7 62 aa-1.08□□□□□ -2.58
LTN1-206ENST00000486427 FAM208AQ9UK61 1670 aaKnown RBP-1.08□□□□□ -2.58
LTN1-206ENST00000486427 GLI2P10070 1586 aa-1.08□□□□□ -2.58
LTN1-206ENST00000486427 SMG1Q96Q15 3661 aaKnown RBP-1.09□□□□□ -2.58
LTN1-206ENST00000486427 M0QZ58 72 aa-1.09□□□□□ -2.58
LTN1-206ENST00000486427 ABCA13Q86UQ4 5058 aa-1.09□□□□□ -2.58
LTN1-206ENST00000486427 CSMD2Q7Z408 3487 aa-1.09□□□□□ -2.58
LTN1-206ENST00000486427 DUOX2Q9NRD8 1548 aa-1.1□□□□□ -2.58
LTN1-206ENST00000486427 PREX2Q70Z35 1606 aa-1.1□□□□□ -2.59
LTN1-206ENST00000486427 LINC01549A6NIU2 74 aa-1.11□□□□□ -2.59
LTN1-206ENST00000486427 ALS2Q96Q42 1657 aa-1.12□□□□□ -2.59
LTN1-206ENST00000486427 A8MTW9 85 aa-1.12□□□□□ -2.59
LTN1-206ENST00000486427 KAAG1Q9UBP8 84 aa-1.12□□□□□ -2.59
LTN1-206ENST00000486427 ABCA6Q8N139 1617 aa-1.12□□□□□ -2.59
LTN1-206ENST00000486427 K7EMI3 77 aa-1.13□□□□□ -2.59
LTN1-206ENST00000486427 M0R1W7 72 aa-1.13□□□□□ -2.59
LTN1-206ENST00000486427 MT1GP13640 62 aa-1.13□□□□□ -2.59
LTN1-206ENST00000486427 SMCO4Q9NRQ5 59 aa-1.14□□□□□ -2.59
LTN1-206ENST00000486427 ABRACLQ9P1F3 81 aa-1.14□□□□□ -2.59
LTN1-206ENST00000486427 KIF21BO75037 1637 aa-1.15□□□□□ -2.59
LTN1-206ENST00000486427 DMXL2Q8TDJ6 3036 aa-1.16□□□□□ -2.59
LTN1-206ENST00000486427 PDCD5O14737 125 aa-1.16□□□□□ -2.6
LTN1-206ENST00000486427 SPART-AS1P0CW21 52 aa-1.16□□□□□ -2.6
LTN1-206ENST00000486427 LINC00308Q8TCZ7 52 aa-1.16□□□□□ -2.6
LTN1-206ENST00000486427 TLN1Q9Y490 2541 aaKnown RBP-1.16□□□□□ -2.6
LTN1-206ENST00000486427 ITPR2Q14571 2701 aa-1.17□□□□□ -2.6
LTN1-206ENST00000486427 MT2AP02795 61 aa-1.18□□□□□ -2.6
LTN1-206ENST00000486427 MT1MQ8N339 61 aa-1.18□□□□□ -2.6
LTN1-206ENST00000486427 EEA1Q15075 1411 aa-1.18□□□□□ -2.6
LTN1-206ENST00000486427 CCDC180Q9P1Z9 1646 aa-1.18□□□□□ -2.6
LTN1-206ENST00000486427 SMIM27A0A1W2PRY6 76 aa-1.19□□□□□ -2.6
LTN1-206ENST00000486427 WFDC10BQ8IUB3 73 aa-1.19□□□□□ -2.6
LTN1-206ENST00000486427 TMEM167BQ9NRX6 74 aa-1.19□□□□□ -2.6
LTN1-206ENST00000486427 SCRIBQ14160 1630 aa-1.2□□□□□ -2.6
LTN1-206ENST00000486427 EFCAB6Q5THR3 1501 aa-1.2□□□□□ -2.6
LTN1-206ENST00000486427 IGIPA6NJ69 53 aa-1.21□□□□□ -2.6
LTN1-206ENST00000486427 EFCAB5A4FU69 1503 aa-1.21□□□□□ -2.6
LTN1-206ENST00000486427 ZFHX4Q86UP3 3567 aa-1.21□□□□□ -2.6
LTN1-206ENST00000486427 ATMQ13315 3056 aa-1.21□□□□□ -2.6
LTN1-206ENST00000486427 LMO7Q8WWI1 1683 aa-1.22□□□□□ -2.6
LTN1-206ENST00000486427 SERF2P84101 59 aa-1.22□□□□□ -2.6
LTN1-206ENST00000486427 NMES1Q9C002 83 aa-1.22□□□□□ -2.6
LTN1-206ENST00000486427 CRYBG3Q68DQ2 2970 aa-1.23□□□□□ -2.61
LTN1-206ENST00000486427 UGGT1Q9NYU2 1555 aa-1.25□□□□□ -2.61
LTN1-206ENST00000486427 MYO15AQ9UKN7 3530 aa-1.25□□□□□ -2.61
LTN1-206ENST00000486427 DEFB4AO15263 64 aa-1.25□□□□□ -2.61
LTN1-206ENST00000486427 MROH2AA6NES4 1674 aa-1.26□□□□□ -2.61
LTN1-206ENST00000486427 ABCA10Q8WWZ4 1543 aa-1.26□□□□□ -2.61
LTN1-206ENST00000486427 FREM2Q5SZK8 3169 aa-1.26□□□□□ -2.61
LTN1-206ENST00000486427 PRUNE2Q8WUY3 3088 aa-1.27□□□□□ -2.61
LTN1-206ENST00000486427 CFAP54Q96N23 3096 aa-1.27□□□□□ -2.61
LTN1-206ENST00000486427 SYCP2Q9BX26 1530 aa-1.28□□□□□ -2.61
LTN1-206ENST00000486427 MT1BP07438 61 aa-1.28□□□□□ -2.61
LTN1-206ENST00000486427 LEAP2Q969E1 77 aa-1.28□□□□□ -2.61
LTN1-206ENST00000486427 H0YGX0 51 aa-1.29□□□□□ -2.62
LTN1-206ENST00000486427 POLR2KP53803 58 aaKnown RBP-1.29□□□□□ -2.62
LTN1-206ENST00000486427 VPS13CQ709C8 3753 aa-1.3□□□□□ -2.62
LTN1-206ENST00000486427 BOD1L1Q8NFC6 3051 aa-1.31□□□□□ -2.62
LTN1-206ENST00000486427 A0A087WWC5 75 aa-1.31□□□□□ -2.62
LTN1-206ENST00000486427 ABCA5Q8WWZ7 1642 aa-1.31□□□□□ -2.62
LTN1-206ENST00000486427 DEFB131AP59861 70 aa-1.32□□□□□ -2.62
LTN1-206ENST00000486427 DEFB136Q30KP8 78 aa-1.32□□□□□ -2.62
LTN1-206ENST00000486427 CPS1P31327 1500 aa-1.32□□□□□ -2.62
LTN1-206ENST00000486427 AGLP35573 1532 aa-1.32□□□□□ -2.62
LTN1-206ENST00000486427 TFF3Q07654 80 aa-1.33□□□□□ -2.62
LTN1-206ENST00000486427 S100ZQ8WXG8 99 aa-1.33□□□□□ -2.62
LTN1-206ENST00000486427 WDFY3Q8IZQ1 3526 aa-1.35□□□□□ -2.63
LTN1-206ENST00000486427 NRXN3Q9Y4C0 1643 aa-1.36□□□□□ -2.63
LTN1-206ENST00000486427 FRYLO94915 3013 aa-1.36□□□□□ -2.63
LTN1-206ENST00000486427 IQGAP1P46940 1657 aa-1.36□□□□□ -2.63
LTN1-206ENST00000486427 DDX60Q8IY21 1712 aaKnown RBP-1.38□□□□□ -2.63
LTN1-206ENST00000486427 PRXQ9BXM0 1461 aa-1.38□□□□□ -2.63
LTN1-206ENST00000486427 PCNTO95613 3336 aa-1.39□□□□□ -2.63
LTN1-206ENST00000486427 PLNP26678 52 aa-1.39□□□□□ -2.63
LTN1-206ENST00000486427 SPEGQ15772 3267 aa-1.4□□□□□ -2.63
LTN1-206ENST00000486427 SZT2Q5T011 3432 aa-1.4□□□□□ -2.63
LTN1-206ENST00000486427 RPS29P62273 56 aaKnown RBP-1.4□□□□□ -2.63
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms