RNA–Protein interactions for RNA: ENST00000483290.5

COMMD6-210, Transcript of COMM domain containing 6, humanhuman

TSL 2

Gene COMMD6, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-210ENST00000483290 FBN3Q75N90 2809 aa1.92□□□□□ -2.1
COMMD6-210ENST00000483290 MEGF8Q7Z7M0 2845 aa1.92□□□□□ -2.1
COMMD6-210ENST00000483290 RP1L1Q8IWN7 2480 aaPredicted RBP1.92□□□□□ -2.1
COMMD6-210ENST00000483290 DNAH11Q96DT5 4516 aa1.92□□□□□ -2.1
COMMD6-210ENST00000483290 SRRM2Q9UQ35 2752 aaKnown RBP1.92□□□□□ -2.1
COMMD6-210ENST00000483290 BOD1L1Q8NFC6 3051 aa1.91□□□□□ -2.1
COMMD6-210ENST00000483290 VWFP04275 2813 aa1.91□□□□□ -2.1
COMMD6-210ENST00000483290 SPENQ96T58 3664 aaKnown RBP1.91□□□□□ -2.1
COMMD6-210ENST00000483290 USP9YO00507 2555 aaPredicted RBP1.91□□□□□ -2.1
COMMD6-210ENST00000483290 CELSR1Q9NYQ6 3014 aa1.91□□□□□ -2.1
COMMD6-210ENST00000483290 SPG11Q96JI7 2443 aa1.9□□□□□ -2.1
COMMD6-210ENST00000483290 LRRK2Q5S007 2527 aa1.9□□□□□ -2.11
COMMD6-210ENST00000483290 PDZD2O15018 2839 aa1.9□□□□□ -2.11
COMMD6-210ENST00000483290 BSNQ9UPA5 3926 aa1.89□□□□□ -2.11
COMMD6-210ENST00000483290 DEFB4AO15263 64 aa1.89□□□□□ -2.11
COMMD6-210ENST00000483290 U3KQA8 63 aa1.89□□□□□ -2.11
COMMD6-210ENST00000483290 NIPBLQ6KC79 2804 aaeCLIP1.89□□□□□ -2.11
COMMD6-210ENST00000483290 DMBT1Q9UGM3 2413 aaPredicted RBP1.88□□□□□ -2.11
COMMD6-210ENST00000483290 NF1P21359 2839 aa1.88□□□□□ -2.11
COMMD6-210ENST00000483290 KRTAP12-3P60328 96 aa1.88□□□□□ -2.11
COMMD6-210ENST00000483290 ADGRG4Q8IZF6 3080 aa1.88□□□□□ -2.11
COMMD6-210ENST00000483290 NBASA2RRP1 2371 aa1.87□□□□□ -2.11
COMMD6-210ENST00000483290 HMCN1Q96RW7 5635 aa1.87□□□□□ -2.11
COMMD6-210ENST00000483290 CSMD1Q96PZ7 3565 aa1.87□□□□□ -2.11
COMMD6-210ENST00000483290 AKAP9Q99996 3911 aa1.86□□□□□ -2.11
COMMD6-210ENST00000483290 APCP25054 2843 aa1.86□□□□□ -2.11
COMMD6-210ENST00000483290 TLN1Q9Y490 2541 aaKnown RBP1.86□□□□□ -2.11
COMMD6-210ENST00000483290 HIVEP1P15822 2718 aa1.86□□□□□ -2.11
COMMD6-210ENST00000483290 CRCT1Q9UGL9 99 aa1.86□□□□□ -2.11
COMMD6-210ENST00000483290 HIVEP3Q5T1R4 2406 aa1.86□□□□□ -2.11
COMMD6-210ENST00000483290 ANKHD1Q8IWZ3 2542 aaKnown RBP1.85□□□□□ -2.11
COMMD6-210ENST00000483290 MTORP42345 2549 aa1.84□□□□□ -2.11
COMMD6-210ENST00000483290 KRTAP10-4P60372 401 aaPredicted RBP1.84□□□□□ -2.11
COMMD6-210ENST00000483290 TACC2O95359 2948 aa1.84□□□□□ -2.12
COMMD6-210ENST00000483290 CSMD2Q7Z408 3487 aa1.83□□□□□ -2.12
COMMD6-210ENST00000483290 ATRQ13535 2644 aa1.83□□□□□ -2.12
COMMD6-210ENST00000483290 DCHS2Q6V1P9 2916 aa1.82□□□□□ -2.12
COMMD6-210ENST00000483290 KRTAP2-3P0C7H8 128 aa1.82□□□□□ -2.12
COMMD6-210ENST00000483290 KRTAP2-4Q9BYR9 128 aa1.82□□□□□ -2.12
COMMD6-210ENST00000483290 KRTAP2-1Q9BYU5 128 aa1.82□□□□□ -2.12
COMMD6-210ENST00000483290 MAP1AP78559 2803 aaPredicted RBP1.81□□□□□ -2.12
COMMD6-210ENST00000483290 NBEAL1Q6ZS30 2694 aa1.8□□□□□ -2.12
COMMD6-210ENST00000483290 ZNF469Q96JG9 3925 aaPredicted RBP1.8□□□□□ -2.12
COMMD6-210ENST00000483290 DNHD1Q96M86 4753 aa1.79□□□□□ -2.12
COMMD6-210ENST00000483290 CUBNO60494 3623 aa1.78□□□□□ -2.12
COMMD6-210ENST00000483290 PKD1L1Q8TDX9 2849 aa1.78□□□□□ -2.12
COMMD6-210ENST00000483290 VPS13CQ709C8 3753 aa1.78□□□□□ -2.13
COMMD6-210ENST00000483290 STAB1Q9NY15 2570 aa1.77□□□□□ -2.13
COMMD6-210ENST00000483290 KRTAP4-1Q9BYQ7 146 aa1.77□□□□□ -2.13
COMMD6-210ENST00000483290 MXRA5Q9NR99 2828 aa1.77□□□□□ -2.13
COMMD6-210ENST00000483290 NSD1Q96L73 2696 aaPredicted RBP1.77□□□□□ -2.13
COMMD6-210ENST00000483290 FLNAP21333 2647 aaKnown RBP1.77□□□□□ -2.13
COMMD6-210ENST00000483290 ACANP16112 2415 aa1.77□□□□□ -2.13
COMMD6-210ENST00000483290 KRTAP8-1Q8IUC2 63 aa1.76□□□□□ -2.13
COMMD6-210ENST00000483290 TGP01266 2768 aa1.76□□□□□ -2.13
COMMD6-210ENST00000483290 SMR3AQ99954 134 aa1.75□□□□□ -2.13
COMMD6-210ENST00000483290 DNAH8Q96JB1 4490 aa1.75□□□□□ -2.13
COMMD6-210ENST00000483290 NOTCH1P46531 2555 aa1.74□□□□□ -2.13
COMMD6-210ENST00000483290 COL7A1Q02388 2944 aa1.73□□□□□ -2.13
COMMD6-210ENST00000483290 SACSQ9NZJ4 4579 aa1.72□□□□□ -2.13
COMMD6-210ENST00000483290 SONP18583 2426 aaKnown RBP1.71□□□□□ -2.14
COMMD6-210ENST00000483290 TLN2Q9Y4G6 2542 aa1.71□□□□□ -2.14
COMMD6-210ENST00000483290 CSMD3Q7Z407 3707 aa1.7□□□□□ -2.14
COMMD6-210ENST00000483290 ANK2Q01484 3957 aa1.7□□□□□ -2.14
COMMD6-210ENST00000483290 HRNRQ86YZ3 2850 aaPredicted RBP1.7□□□□□ -2.14
COMMD6-210ENST00000483290 NBEAL2Q6ZNJ1 2754 aa1.7□□□□□ -2.14
COMMD6-210ENST00000483290 MGAM2Q2M2H8 2515 aa1.69□□□□□ -2.14
COMMD6-210ENST00000483290 ZANQ9Y493 2812 aa1.69□□□□□ -2.14
COMMD6-210ENST00000483290 SVEP1Q4LDE5 3571 aa1.68□□□□□ -2.14
COMMD6-210ENST00000483290 TENM1Q9UKZ4 2725 aa1.66□□□□□ -2.14
COMMD6-210ENST00000483290 VPS13BQ7Z7G8 4022 aa1.65□□□□□ -2.14
COMMD6-210ENST00000483290 KMT2AQ03164 3969 aa1.65□□□□□ -2.14
COMMD6-210ENST00000483290 TRRAPQ9Y4A5 3859 aa1.65□□□□□ -2.15
COMMD6-210ENST00000483290 PRM1P04553 51 aa1.64□□□□□ -2.15
COMMD6-210ENST00000483290 DNAH10Q8IVF4 4471 aa1.63□□□□□ -2.15
COMMD6-210ENST00000483290 DYNC2H1Q8NCM8 4307 aaKnown RBP1.62□□□□□ -2.15
COMMD6-210ENST00000483290 KMT2CQ8NEZ4 4911 aaKnown RBP1.62□□□□□ -2.15
COMMD6-210ENST00000483290 FRAS1Q86XX4 4008 aa1.61□□□□□ -2.15
COMMD6-210ENST00000483290 RYR3Q15413 4870 aa1.61□□□□□ -2.15
COMMD6-210ENST00000483290 PRKDCP78527 4128 aaKnown RBP1.61□□□□□ -2.15
COMMD6-210ENST00000483290 CMYA5Q8N3K9 4069 aa1.61□□□□□ -2.15
COMMD6-210ENST00000483290 DNAH3Q8TD57 4116 aa1.6□□□□□ -2.15
COMMD6-210ENST00000483290 ANK3Q12955 4377 aaKnown RBP1.6□□□□□ -2.15
COMMD6-210ENST00000483290 LYSTQ99698 3801 aa1.59□□□□□ -2.15
COMMD6-210ENST00000483290 DNAH2Q9P225 4427 aa1.58□□□□□ -2.16
COMMD6-210ENST00000483290 EPPK1P58107 5090 aaKnown RBP1.58□□□□□ -2.16
COMMD6-210ENST00000483290 BIRC6Q9NR09 4857 aa1.57□□□□□ -2.16
COMMD6-210ENST00000483290 PCLOQ9Y6V0 5065 aa1.57□□□□□ -2.16
COMMD6-210ENST00000483290 TNXBP22105 4242 aa1.57□□□□□ -2.16
COMMD6-210ENST00000483290 PKHD1L1Q86WI1 4243 aa1.57□□□□□ -2.16
COMMD6-210ENST00000483290 DNAH7Q8WXX0 4024 aa1.56□□□□□ -2.16
COMMD6-210ENST00000483290 SMR3BP02814 79 aaPredicted RBP1.56□□□□□ -2.16
COMMD6-210ENST00000483290 HYDINQ4G0P3 5121 aa1.55□□□□□ -2.16
COMMD6-210ENST00000483290 HUWE1Q7Z6Z7 4374 aaKnown RBP1.55□□□□□ -2.16
COMMD6-210ENST00000483290 TENM3Q9P273 2699 aa1.55□□□□□ -2.16
COMMD6-210ENST00000483290 FCGBPQ9Y6R7 5405 aaPredicted RBP1.55□□□□□ -2.16
COMMD6-210ENST00000483290 APOBP04114 4563 aaKnown RBP1.54□□□□□ -2.16
COMMD6-210ENST00000483290 RYR1P21817 5038 aa1.52□□□□□ -2.17
COMMD6-210ENST00000483290 DNAH1Q9P2D7 4330 aa1.52□□□□□ -2.17
COMMD6-210ENST00000483290 FAT3Q8TDW7 4589 aa1.52□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms