RNA–Protein interactions for RNA: ENST00000481173.1

CCNL1-223, Transcript of cyclin L1, humanhuman

TSL 2

Gene CCNL1, Length 571 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-223ENST00000481173 IQGAP3Q86VI3 1631 aa-0.24□□□□□ -2.45
CCNL1-223ENST00000481173 MADDQ8WXG6 1647 aa-0.24□□□□□ -2.45
CCNL1-223ENST00000481173 C3P01024 1663 aa-0.24□□□□□ -2.45
CCNL1-223ENST00000481173 LRBAP50851 2863 aa-0.24□□□□□ -2.45
CCNL1-223ENST00000481173 TJP1Q07157 1748 aa-0.24□□□□□ -2.45
CCNL1-223ENST00000481173 PARP4Q9UKK3 1724 aaKnown RBP-0.24□□□□□ -2.45
CCNL1-223ENST00000481173 SPENQ96T58 3664 aaKnown RBP-0.25□□□□□ -2.45
CCNL1-223ENST00000481173 LAMA3Q16787 3333 aa-0.25□□□□□ -2.45
CCNL1-223ENST00000481173 IGIPA6NJ69 53 aa-0.25□□□□□ -2.45
CCNL1-223ENST00000481173 SPART-AS1P0CW21 52 aa-0.25□□□□□ -2.45
CCNL1-223ENST00000481173 GLI2P10070 1586 aa-0.25□□□□□ -2.45
CCNL1-223ENST00000481173 ABCA6Q8N139 1617 aa-0.26□□□□□ -2.45
CCNL1-223ENST00000481173 PLNP26678 52 aa-0.26□□□□□ -2.45
CCNL1-223ENST00000481173 WFDC10BQ8IUB3 73 aa-0.26□□□□□ -2.45
CCNL1-223ENST00000481173 CELSR3Q9NYQ7 3312 aa-0.26□□□□□ -2.45
CCNL1-223ENST00000481173 CHD7Q9P2D1 2997 aa-0.26□□□□□ -2.45
CCNL1-223ENST00000481173 ADGRG4Q8IZF6 3080 aa-0.27□□□□□ -2.45
CCNL1-223ENST00000481173 ANKRD36CQ5JPF3 1778 aa-0.27□□□□□ -2.45
CCNL1-223ENST00000481173 DNAH7Q8WXX0 4024 aa-0.27□□□□□ -2.45
CCNL1-223ENST00000481173 NIPBLQ6KC79 2804 aaeCLIP-0.27□□□□□ -2.45
CCNL1-223ENST00000481173 CPS1P31327 1500 aa-0.27□□□□□ -2.45
CCNL1-223ENST00000481173 LINC01546A6NGU7 62 aa-0.27□□□□□ -2.45
CCNL1-223ENST00000481173 DYNC1H1Q14204 4646 aaKnown RBP-0.27□□□□□ -2.45
CCNL1-223ENST00000481173 ABCA10Q8WWZ4 1543 aa-0.28□□□□□ -2.45
CCNL1-223ENST00000481173 DEFB131AP59861 70 aa-0.28□□□□□ -2.45
CCNL1-223ENST00000481173 KRTAP19-5Q3LI72 72 aa-0.28□□□□□ -2.45
CCNL1-223ENST00000481173 KRTAP8-1Q8IUC2 63 aa-0.28□□□□□ -2.45
CCNL1-223ENST00000481173 SPTAN1Q13813 2472 aaKnown RBP-0.28□□□□□ -2.45
CCNL1-223ENST00000481173 UGGT1Q9NYU2 1555 aa-0.28□□□□□ -2.45
CCNL1-223ENST00000481173 MAST1Q9Y2H9 1570 aa-0.28□□□□□ -2.45
CCNL1-223ENST00000481173 CEP295Q9C0D2 2601 aa-0.29□□□□□ -2.46
CCNL1-223ENST00000481173 MYO9AB2RTY4 2548 aa-0.29□□□□□ -2.46
CCNL1-223ENST00000481173 RNF213Q63HN8 5207 aa-0.29□□□□□ -2.46
CCNL1-223ENST00000481173 SRCAPQ6ZRS2 3230 aa-0.29□□□□□ -2.46
CCNL1-223ENST00000481173 MGAQ8IWI9 3026 aa-0.29□□□□□ -2.46
CCNL1-223ENST00000481173 CMYA5Q8N3K9 4069 aa-0.29□□□□□ -2.46
CCNL1-223ENST00000481173 DNHD1Q96M86 4753 aa-0.29□□□□□ -2.46
CCNL1-223ENST00000481173 CFAP46Q8IYW2 2715 aa-0.29□□□□□ -2.46
CCNL1-223ENST00000481173 LY75O60449 1722 aa-0.3□□□□□ -2.46
CCNL1-223ENST00000481173 SMR3BP02814 79 aaPredicted RBP-0.3□□□□□ -2.46
CCNL1-223ENST00000481173 RYR3Q15413 4870 aa-0.3□□□□□ -2.46
CCNL1-223ENST00000481173 EFCAB6Q5THR3 1501 aa-0.3□□□□□ -2.46
CCNL1-223ENST00000481173 KIAA1109Q2LD37 5005 aa-0.3□□□□□ -2.46
CCNL1-223ENST00000481173 DNAH17Q9UFH2 4485 aa-0.3□□□□□ -2.46
CCNL1-223ENST00000481173 ITPR2Q14571 2701 aa-0.31□□□□□ -2.46
CCNL1-223ENST00000481173 CMC2Q9NRP2 79 aa-0.31□□□□□ -2.46
CCNL1-223ENST00000481173 CSMD1Q96PZ7 3565 aa-0.31□□□□□ -2.46
CCNL1-223ENST00000481173 DNAH10Q8IVF4 4471 aa-0.31□□□□□ -2.46
CCNL1-223ENST00000481173 COL6A5A8TX70 2615 aa-0.31□□□□□ -2.46
CCNL1-223ENST00000481173 PREX2Q70Z35 1606 aa-0.31□□□□□ -2.46
CCNL1-223ENST00000481173 CCDC180Q9P1Z9 1646 aa-0.31□□□□□ -2.46
CCNL1-223ENST00000481173 RYR2Q92736 4967 aa-0.32□□□□□ -2.46
CCNL1-223ENST00000481173 CDC42BPAQ5VT25 1732 aa-0.32□□□□□ -2.46
CCNL1-223ENST00000481173 CFAP54Q96N23 3096 aa-0.32□□□□□ -2.46
CCNL1-223ENST00000481173 PRXQ9BXM0 1461 aa-0.32□□□□□ -2.46
CCNL1-223ENST00000481173 SMIM2Q9BVW6 85 aa-0.32□□□□□ -2.46
CCNL1-223ENST00000481173 CROCC2H7BZ55 1655 aa-0.33□□□□□ -2.46
CCNL1-223ENST00000481173 MT1EP04732 61 aa-0.33□□□□□ -2.46
CCNL1-223ENST00000481173 MT1XP80297 61 aa-0.33□□□□□ -2.46
CCNL1-223ENST00000481173 PRUNE2Q8WUY3 3088 aa-0.34□□□□□ -2.46
CCNL1-223ENST00000481173 CSMD2Q7Z408 3487 aa-0.34□□□□□ -2.46
CCNL1-223ENST00000481173 KIF21BO75037 1637 aa-0.35□□□□□ -2.46
CCNL1-223ENST00000481173 EYSQ5T1H1 3165 aa-0.35□□□□□ -2.46
CCNL1-223ENST00000481173 CRYBG3Q68DQ2 2970 aa-0.35□□□□□ -2.47
CCNL1-223ENST00000481173 POLR2KP53803 58 aaKnown RBP-0.35□□□□□ -2.47
CCNL1-223ENST00000481173 ALS2Q96Q42 1657 aa-0.35□□□□□ -2.47
CCNL1-223ENST00000481173 ERICH3Q5RHP9 1530 aa-0.35□□□□□ -2.47
CCNL1-223ENST00000481173 TFF3Q07654 80 aa-0.36□□□□□ -2.47
CCNL1-223ENST00000481173 MT1LQ93083 61 aa-0.36□□□□□ -2.47
CCNL1-223ENST00000481173 ADCY10Q96PN6 1610 aa-0.36□□□□□ -2.47
CCNL1-223ENST00000481173 DNAH5Q8TE73 4624 aa-0.37□□□□□ -2.47
CCNL1-223ENST00000481173 DMXL2Q8TDJ6 3036 aa-0.37□□□□□ -2.47
CCNL1-223ENST00000481173 SYCP2Q9BX26 1530 aa-0.37□□□□□ -2.47
CCNL1-223ENST00000481173 MT1HL1P0DM35 61 aa-0.37□□□□□ -2.47
CCNL1-223ENST00000481173 ATMQ13315 3056 aa-0.37□□□□□ -2.47
CCNL1-223ENST00000481173 AGLP35573 1532 aa-0.38□□□□□ -2.47
CCNL1-223ENST00000481173 FAM208AQ9UK61 1670 aaKnown RBP-0.38□□□□□ -2.47
CCNL1-223ENST00000481173 A0A1B0GUL6 1792 aa-0.38□□□□□ -2.47
CCNL1-223ENST00000481173 ABCA5Q8WWZ7 1642 aa-0.38□□□□□ -2.47
CCNL1-223ENST00000481173 TRPM2O94759 1503 aa-0.38□□□□□ -2.47
CCNL1-223ENST00000481173 SMG1Q96Q15 3661 aaKnown RBP-0.39□□□□□ -2.47
CCNL1-223ENST00000481173 DEFB136Q30KP8 78 aa-0.39□□□□□ -2.47
CCNL1-223ENST00000481173 LEAP2Q969E1 77 aa-0.39□□□□□ -2.47
CCNL1-223ENST00000481173 ZFHX4Q86UP3 3567 aa-0.4□□□□□ -2.47
CCNL1-223ENST00000481173 ABCC8Q09428 1581 aa-0.4□□□□□ -2.47
CCNL1-223ENST00000481173 FREM2Q5SZK8 3169 aa-0.4□□□□□ -2.47
CCNL1-223ENST00000481173 SNRPGP15A8MWD9 76 aa-0.4□□□□□ -2.47
CCNL1-223ENST00000481173 NDUFA1O15239 70 aa-0.4□□□□□ -2.47
CCNL1-223ENST00000481173 FRYLO94915 3013 aa-0.4□□□□□ -2.47
CCNL1-223ENST00000481173 LMO7Q8WWI1 1683 aa-0.4□□□□□ -2.47
CCNL1-223ENST00000481173 FANCD2Q9BXW9 1451 aa-0.41□□□□□ -2.47
CCNL1-223ENST00000481173 TLN1Q9Y490 2541 aaKnown RBP-0.42□□□□□ -2.48
CCNL1-223ENST00000481173 TRRAPQ9Y4A5 3859 aa-0.43□□□□□ -2.48
CCNL1-223ENST00000481173 DEFB4AO15263 64 aa-0.43□□□□□ -2.48
CCNL1-223ENST00000481173 BOD1L1Q8NFC6 3051 aa-0.43□□□□□ -2.48
CCNL1-223ENST00000481173 MT2AP02795 61 aa-0.44□□□□□ -2.48
CCNL1-223ENST00000481173 MT1MQ8N339 61 aa-0.44□□□□□ -2.48
CCNL1-223ENST00000481173 MROH2AA6NES4 1674 aa-0.45□□□□□ -2.48
CCNL1-223ENST00000481173 MT1GP13640 62 aa-0.45□□□□□ -2.48
CCNL1-223ENST00000481173 VPS13CQ709C8 3753 aa-0.46□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms