RNA–Protein interactions for RNA: ENST00000480961.1

CTSA-206, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 513 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-206ENST00000480961 CSAG1Q6PB30 78 aa9.55□□□□□ -0.88
CTSA-206ENST00000480961 TRAV7A0A075B6U4 112 aa9.54□□□□□ -0.88
CTSA-206ENST00000480961 CRCT1Q9UGL9 99 aa9.53□□□□□ -0.88
CTSA-206ENST00000480961 SMIM20Q8N5G0 67 aa9.51□□□□□ -0.89
CTSA-206ENST00000480961 LCE2BO14633 110 aa9.48□□□□□ -0.89
CTSA-206ENST00000480961 A8MUN3 132 aa9.46□□□□□ -0.9
CTSA-206ENST00000480961 SSPOA2VEC9 5147 aa9.45□□□□□ -0.9
CTSA-206ENST00000480961 NDUFC1O43677 76 aa9.39□□□□□ -0.91
CTSA-206ENST00000480961 SNURFQ9Y675 71 aa9.38□□□□□ -0.91
CTSA-206ENST00000480961 SERP2Q8N6R1 65 aa9.34□□□□□ -0.91
CTSA-206ENST00000480961 DMAC1Q96GE9 116 aa9.34□□□□□ -0.91
CTSA-206ENST00000480961 C20orf197Q8N268 126 aa9.3□□□□□ -0.92
CTSA-206ENST00000480961 KRTAP19-1Q8IUB9 90 aa9.24□□□□□ -0.93
CTSA-206ENST00000480961 ACYP2P14621 99 aa9.19□□□□□ -0.94
CTSA-206ENST00000480961 SVIPQ8NHG7 77 aa9.19□□□□□ -0.94
CTSA-206ENST00000480961 ADM2Q7Z4H4 148 aa9.18□□□□□ -0.94
CTSA-206ENST00000480961 FCGBPQ9Y6R7 5405 aaPredicted RBP9.16□□□□□ -0.94
CTSA-206ENST00000480961 H0YAA0 97 aa9.16□□□□□ -0.94
CTSA-206ENST00000480961 COX7CP15954 63 aa9.14□□□□□ -0.95
CTSA-206ENST00000480961 SPRR2GQ9BYE4 73 aa9.13□□□□□ -0.95
CTSA-206ENST00000480961 SPANXA2-OT1Q8N9U9 137 aa9.09□□□□□ -0.95
CTSA-206ENST00000480961 CRIPTQ9P021 101 aa9.07□□□□□ -0.96
CTSA-206ENST00000480961 CHKB-CPT1BH3BT56 60 aa9.05□□□□□ -0.96
CTSA-206ENST00000480961 KRTAP19-6Q3LI70 58 aa9.04□□□□□ -0.96
CTSA-206ENST00000480961 KRTAP19-8Q3LI54 63 aa9.03□□□□□ -0.96
CTSA-206ENST00000480961 MT1BP07438 61 aa9.02□□□□□ -0.97
CTSA-206ENST00000480961 P0C880 135 aa9.02□□□□□ -0.97
CTSA-206ENST00000480961 ANAPC13Q9BS18 74 aa9.02□□□□□ -0.97
CTSA-206ENST00000480961 CYSTM1Q9H1C7 97 aa9.02□□□□□ -0.97
CTSA-206ENST00000480961 Q5VV11 94 aa9.01□□□□□ -0.97
CTSA-206ENST00000480961 SPTSSBQ8NFR3 76 aa8.98□□□□□ -0.97
CTSA-206ENST00000480961 H7BZZ5 65 aa8.94□□□□□ -0.98
CTSA-206ENST00000480961 COA5Q86WW8 74 aa8.89□□□□□ -0.99
CTSA-206ENST00000480961 CCDC179H3BU77 68 aa8.87□□□□□ -0.99
CTSA-206ENST00000480961 R4GN34 69 aa8.87□□□□□ -0.99
CTSA-206ENST00000480961 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.86□□□□□ -0.99
CTSA-206ENST00000480961 MACF1Q9UPN3 7388 aaKnown RBP8.85□□□□□ -0.99
CTSA-206ENST00000480961 M0QZ58 72 aa8.85□□□□□ -0.99
CTSA-206ENST00000480961 A6NN06 94 aa8.78□□□□□ -1
CTSA-206ENST00000480961 LINC01554Q52M75 96 aa8.75□□□□□ -1.01
CTSA-206ENST00000480961 SYNE2Q8WXH0 6885 aaKnown RBP8.74□□□□□ -1.01
CTSA-206ENST00000480961 KRTAP10-5P60370 271 aa8.72□□□□□ -1.01
CTSA-206ENST00000480961 PLAC4Q8WY50 150 aa8.68□□□□□ -1.02
CTSA-206ENST00000480961 KRTAP9-7A8MTY7 169 aa8.64□□□□□ -1.03
CTSA-206ENST00000480961 SEC61GP60059 68 aa8.57□□□□□ -1.04
CTSA-206ENST00000480961 KRTAP13-4Q3LI77 160 aa8.57□□□□□ -1.04
CTSA-206ENST00000480961 SERP1Q9Y6X1 66 aa8.56□□□□□ -1.04
CTSA-206ENST00000480961 MT1XP80297 61 aa8.55□□□□□ -1.04
CTSA-206ENST00000480961 ATP5EP56381 51 aaPredicted RBP8.53□□□□□ -1.04
CTSA-206ENST00000480961 PRO2289Q9P1D8 64 aa8.48□□□□□ -1.05
CTSA-206ENST00000480961 TMEM258P61165 79 aa8.46□□□□□ -1.06
CTSA-206ENST00000480961 A0A1B0GU33 70 aa8.42□□□□□ -1.06
CTSA-206ENST00000480961 A0A1B0GU69 56 aa8.41□□□□□ -1.06
CTSA-206ENST00000480961 SPATA8Q6RVD6 105 aa8.41□□□□□ -1.06
CTSA-206ENST00000480961 A0A0D9SG42 100 aa8.38□□□□□ -1.07
CTSA-206ENST00000480961 KRTAP6-3Q3LI67 103 aa8.37□□□□□ -1.07
CTSA-206ENST00000480961 KMT2DO14686 5537 aa8.33□□□□□ -1.08
CTSA-206ENST00000480961 CAMK2N1Q7Z7J9 78 aa8.24□□□□□ -1.09
CTSA-206ENST00000480961 LINC01558Q9Y6Z2 57 aa8.24□□□□□ -1.09
CTSA-206ENST00000480961 PRR15LQ9BU68 103 aa8.22□□□□□ -1.09
CTSA-206ENST00000480961 MUC12Q9UKN1 5478 aa8.21□□□□□ -1.09
CTSA-206ENST00000480961 SPINT4Q6UDR6 99 aa8.21□□□□□ -1.1
CTSA-206ENST00000480961 NEBP20929 6669 aa8.21□□□□□ -1.1
CTSA-206ENST00000480961 KRTAP12-2P59991 146 aa8.2□□□□□ -1.1
CTSA-206ENST00000480961 KRTAP10-7P60409 375 aaPredicted RBP8.19□□□□□ -1.1
CTSA-206ENST00000480961 A8MU10 97 aa8.18□□□□□ -1.1
CTSA-206ENST00000480961 KRTAP12-1P59990 96 aa8.16□□□□□ -1.1
CTSA-206ENST00000480961 SMIM26A0A096LP01 95 aa8.15□□□□□ -1.1
CTSA-206ENST00000480961 KRTAP4-8A0A0G2JLE6 195 aa8.11□□□□□ -1.11
CTSA-206ENST00000480961 KRTAP4-8Q9BYQ9 185 aa8.11□□□□□ -1.11
CTSA-206ENST00000480961 KRTAP5-9P26371 169 aa8.1□□□□□ -1.11
CTSA-206ENST00000480961 MDN1Q9NU22 5596 aa8.09□□□□□ -1.11
CTSA-206ENST00000480961 PCP4P48539 62 aa8.09□□□□□ -1.11
CTSA-206ENST00000480961 KRTAP10-12P60413 245 aa8.09□□□□□ -1.11
CTSA-206ENST00000480961 KRTAP8-1Q8IUC2 63 aa8.08□□□□□ -1.12
CTSA-206ENST00000480961 SPRR2FQ96RM1 72 aa8.01□□□□□ -1.13
CTSA-206ENST00000480961 UQCR11O14957 56 aa7.97□□□□□ -1.13
CTSA-206ENST00000480961 PSPHP1O15172 72 aa7.94□□□□□ -1.14
CTSA-206ENST00000480961 Q1T7F1 81 aa7.92□□□□□ -1.14
CTSA-206ENST00000480961 V9GYY9 64 aa7.91□□□□□ -1.14
CTSA-206ENST00000480961 MIR22HGQ0VDD5 57 aa7.85□□□□□ -1.15
CTSA-206ENST00000480961 SPRR2EP22531 72 aa7.81□□□□□ -1.16
CTSA-206ENST00000480961 SPRR2BP35325 72 aa7.81□□□□□ -1.16
CTSA-206ENST00000480961 SPRR2AP35326 72 aa7.81□□□□□ -1.16
CTSA-206ENST00000480961 RPS28P62857 69 aaKnown RBP7.79□□□□□ -1.16
CTSA-206ENST00000480961 C10orf95Q9H7T3 257 aa7.79□□□□□ -1.16
CTSA-206ENST00000480961 LCE1AQ5T7P2 110 aa7.74□□□□□ -1.17
CTSA-206ENST00000480961 A6NED7 52 aa7.66□□□□□ -1.18
CTSA-206ENST00000480961 TNP1P09430 55 aa7.65□□□□□ -1.18
CTSA-206ENST00000480961 KRTAP19-7Q3SYF9 63 aa7.63□□□□□ -1.19
CTSA-206ENST00000480961 KRTAP20-1Q3LI63 56 aa7.61□□□□□ -1.19
CTSA-206ENST00000480961 K7ERS5 55 aa7.59□□□□□ -1.19
CTSA-206ENST00000480961 KRTAP19-5Q3LI72 72 aa7.56□□□□□ -1.2
CTSA-206ENST00000480961 MT1EP04732 61 aa7.55□□□□□ -1.2
CTSA-206ENST00000480961 SPRR2DP22532 72 aa7.55□□□□□ -1.2
CTSA-206ENST00000480961 LCE3AQ5TA76 89 aa7.55□□□□□ -1.2
CTSA-206ENST00000480961 H3BS24 57 aa7.52□□□□□ -1.21
CTSA-206ENST00000480961 KRTAP2-3P0C7H8 128 aa7.49□□□□□ -1.21
CTSA-206ENST00000480961 KRTAP2-4Q9BYR9 128 aa7.49□□□□□ -1.21
CTSA-206ENST00000480961 KRTAP19-3Q7Z4W3 81 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms