RNA–Protein interactions for RNA: ENST00000480045.5

LRP8-209, Transcript of LDL receptor related protein 8, humanhuman

TSL 5

Gene LRP8, Length 3,231 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP8-209ENST00000480045 KRTAP3-3Q9BYR6 98 aa10.29□□□□□ -0.76
LRP8-209ENST00000480045 KRTAP3-2Q9BYR7 98 aa10.27□□□□□ -0.77
LRP8-209ENST00000480045 PKHD1P08F94 4074 aa10.26□□□□□ -0.77
LRP8-209ENST00000480045 S4R3F8 94 aa10.25□□□□□ -0.77
LRP8-209ENST00000480045 FAT1Q14517 4588 aa10.24□□□□□ -0.77
LRP8-209ENST00000480045 KRTAP12-2P59991 146 aa10.22□□□□□ -0.77
LRP8-209ENST00000480045 SACSQ9NZJ4 4579 aa10.2□□□□□ -0.78
LRP8-209ENST00000480045 KRTAP10-8P60410 259 aa10.1□□□□□ -0.79
LRP8-209ENST00000480045 DYNC1H1Q14204 4646 aaKnown RBP10.08□□□□□ -0.8
LRP8-209ENST00000480045 MYCBP2O75592 4640 aa10.07□□□□□ -0.8
LRP8-209ENST00000480045 KRTAP12-1P59990 96 aa10.03□□□□□ -0.8
LRP8-209ENST00000480045 PKHD1L1Q86WI1 4243 aa10.01□□□□□ -0.81
LRP8-209ENST00000480045 HSPG2P98160 4391 aa9.97□□□□□ -0.81
LRP8-209ENST00000480045 XP32Q5T750 250 aa9.94□□□□□ -0.82
LRP8-209ENST00000480045 APOBP04114 4563 aaKnown RBP9.91□□□□□ -0.82
LRP8-209ENST00000480045 KRTAP10-4P60372 401 aaPredicted RBP9.88□□□□□ -0.83
LRP8-209ENST00000480045 LRP1Q07954 4544 aaKnown RBP9.85□□□□□ -0.83
LRP8-209ENST00000480045 FAT3Q8TDW7 4589 aa9.83□□□□□ -0.84
LRP8-209ENST00000480045 A0A0A0MQY5 61 aa9.76□□□□□ -0.85
LRP8-209ENST00000480045 M0QZ58 72 aa9.74□□□□□ -0.85
LRP8-209ENST00000480045 PLAC4Q8WY50 150 aa9.67□□□□□ -0.86
LRP8-209ENST00000480045 LUZP6Q538Z0 58 aa9.65□□□□□ -0.86
LRP8-209ENST00000480045 LPAP08519 4548 aa9.64□□□□□ -0.87
LRP8-209ENST00000480045 TNXBP22105 4242 aa9.59□□□□□ -0.88
LRP8-209ENST00000480045 R4GN34 69 aa9.57□□□□□ -0.88
LRP8-209ENST00000480045 KMT2CQ8NEZ4 4911 aaKnown RBP9.57□□□□□ -0.88
LRP8-209ENST00000480045 A0A1B0GVY2 172 aa9.56□□□□□ -0.88
LRP8-209ENST00000480045 LRP2P98164 4655 aa9.47□□□□□ -0.89
LRP8-209ENST00000480045 Q5VSD8 79 aa9.4□□□□□ -0.91
LRP8-209ENST00000480045 LORP23490 312 aaPredicted RBP9.33□□□□□ -0.92
LRP8-209ENST00000480045 RYR1P21817 5038 aa9.33□□□□□ -0.92
LRP8-209ENST00000480045 KIAA1109Q2LD37 5005 aa9.27□□□□□ -0.93
LRP8-209ENST00000480045 CAMK2N1Q7Z7J9 78 aa9.22□□□□□ -0.93
LRP8-209ENST00000480045 RYR2Q92736 4967 aa9.17□□□□□ -0.94
LRP8-209ENST00000480045 MT1HL1P0DM35 61 aa9.14□□□□□ -0.95
LRP8-209ENST00000480045 PP632Q6XCG6 107 aa9.13□□□□□ -0.95
LRP8-209ENST00000480045 RYR3Q15413 4870 aa9.1□□□□□ -0.95
LRP8-209ENST00000480045 ABCA13Q86UQ4 5058 aa9.1□□□□□ -0.95
LRP8-209ENST00000480045 KRTAP17-1Q9BYP8 105 aa9.09□□□□□ -0.95
LRP8-209ENST00000480045 MUC2Q02817 5179 aa9.04□□□□□ -0.96
LRP8-209ENST00000480045 EPPK1P58107 5090 aaKnown RBP9□□□□□ -0.97
LRP8-209ENST00000480045 TNP1P09430 55 aa8.82□□□□□ -1
LRP8-209ENST00000480045 SEC61BP60468 96 aaKnown RBP8.79□□□□□ -1
LRP8-209ENST00000480045 KRTAP4-1Q9BYQ7 146 aa8.78□□□□□ -1
LRP8-209ENST00000480045 MUC17Q685J3 4493 aa8.77□□□□□ -1.01
LRP8-209ENST00000480045 SPRR5A0A1B0GTR4 108 aa8.68□□□□□ -1.02
LRP8-209ENST00000480045 KRTAP4-5Q9BYR2 181 aa8.63□□□□□ -1.03
LRP8-209ENST00000480045 FAT4Q6V0I7 4981 aa8.53□□□□□ -1.04
LRP8-209ENST00000480045 KRTAP19-2Q3LHN2 52 aa8.52□□□□□ -1.05
LRP8-209ENST00000480045 KRTAP23-1A1A580 65 aa8.51□□□□□ -1.05
LRP8-209ENST00000480045 PRO2289Q9P1D8 64 aa8.4□□□□□ -1.07
LRP8-209ENST00000480045 KRTAP21-3Q3LHN1 58 aa8.39□□□□□ -1.07
LRP8-209ENST00000480045 FLGP20930 4061 aaPredicted RBP8.35□□□□□ -1.07
LRP8-209ENST00000480045 HERC2O95714 4834 aa8.33□□□□□ -1.08
LRP8-209ENST00000480045 RNF213Q63HN8 5207 aa8.33□□□□□ -1.08
LRP8-209ENST00000480045 PCLOQ9Y6V0 5065 aa8.32□□□□□ -1.08
LRP8-209ENST00000480045 J3QL48 77 aa8.32□□□□□ -1.08
LRP8-209ENST00000480045 LCE3AQ5TA76 89 aa8.31□□□□□ -1.08
LRP8-209ENST00000480045 HERC1Q15751 4861 aa8.29□□□□□ -1.08
LRP8-209ENST00000480045 INE1O15225 51 aa8.15□□□□□ -1.1
LRP8-209ENST00000480045 HMCN2Q8NDA2 5059 aa8.07□□□□□ -1.12
LRP8-209ENST00000480045 KRTAP19-1Q8IUB9 90 aa8.06□□□□□ -1.12
LRP8-209ENST00000480045 SPRR2GQ9BYE4 73 aa8.04□□□□□ -1.12
LRP8-209ENST00000480045 M0R2T5 61 aa7.99□□□□□ -1.13
LRP8-209ENST00000480045 UBR4Q5T4S7 5183 aa7.94□□□□□ -1.14
LRP8-209ENST00000480045 KRTAP8-1Q8IUC2 63 aa7.94□□□□□ -1.14
LRP8-209ENST00000480045 BIRC6Q9NR09 4857 aa7.91□□□□□ -1.14
LRP8-209ENST00000480045 KRTAP12-3P60328 96 aa7.86□□□□□ -1.15
LRP8-209ENST00000480045 KRTAP10-10P60014 251 aa7.84□□□□□ -1.15
LRP8-209ENST00000480045 LCE2CQ5TA81 110 aa7.82□□□□□ -1.16
LRP8-209ENST00000480045 KRTAP10-12P60413 245 aa7.73□□□□□ -1.17
LRP8-209ENST00000480045 MT1FP04733 61 aa7.73□□□□□ -1.17
LRP8-209ENST00000480045 KRTAP10-5P60370 271 aa7.67□□□□□ -1.18
LRP8-209ENST00000480045 MT2AP02795 61 aa7.66□□□□□ -1.18
LRP8-209ENST00000480045 USH2AO75445 5202 aa7.65□□□□□ -1.18
LRP8-209ENST00000480045 MT1XP80297 61 aa7.64□□□□□ -1.19
LRP8-209ENST00000480045 KMT2DO14686 5537 aa7.64□□□□□ -1.19
LRP8-209ENST00000480045 MT1HP80294 61 aa7.6□□□□□ -1.19
LRP8-209ENST00000480045 KRTAP10-7P60409 375 aaPredicted RBP7.58□□□□□ -1.2
LRP8-209ENST00000480045 MT1BP07438 61 aa7.54□□□□□ -1.2
LRP8-209ENST00000480045 KRTAP19-8Q3LI54 63 aa7.53□□□□□ -1.2
LRP8-209ENST00000480045 KRTAP9-8Q9BYQ0 159 aa7.5□□□□□ -1.21
LRP8-209ENST00000480045 LCE3CQ5T5A8 94 aa7.38□□□□□ -1.23
LRP8-209ENST00000480045 KRTAP19-5Q3LI72 72 aa7.35□□□□□ -1.23
LRP8-209ENST00000480045 FSIP2Q5CZC0 6907 aa7.32□□□□□ -1.24
LRP8-209ENST00000480045 KRTAP9-6A8MVA2 160 aa7.24□□□□□ -1.25
LRP8-209ENST00000480045 KRTAP9-3Q9BYQ3 159 aa7.13□□□□□ -1.27
LRP8-209ENST00000480045 KRTAP4-7Q9BYR0 210 aa7.08□□□□□ -1.28
LRP8-209ENST00000480045 KRTAP4-8A0A0G2JLE6 195 aa7.07□□□□□ -1.28
LRP8-209ENST00000480045 KRTAP4-8Q9BYQ9 185 aa7.07□□□□□ -1.28
LRP8-209ENST00000480045 KRTAP2-3P0C7H8 128 aa7.03□□□□□ -1.28
LRP8-209ENST00000480045 KRTAP2-4Q9BYR9 128 aa7.03□□□□□ -1.28
LRP8-209ENST00000480045 KRTAP2-1Q9BYU5 128 aa7.03□□□□□ -1.28
LRP8-209ENST00000480045 DSTQ03001 7570 aaKnown RBP6.86□□□□□ -1.31
LRP8-209ENST00000480045 LCE2BO14633 110 aa6.84□□□□□ -1.31
LRP8-209ENST00000480045 KRTAP19-7Q3SYF9 63 aa6.8□□□□□ -1.32
LRP8-209ENST00000480045 OBSCNQ5VST9 7968 aa6.7□□□□□ -1.34
LRP8-209ENST00000480045 FCGBPQ9Y6R7 5405 aaPredicted RBP6.66□□□□□ -1.34
LRP8-209ENST00000480045 MT1LQ93083 61 aa6.64□□□□□ -1.35
LRP8-209ENST00000480045 MUC12Q9UKN1 5478 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms