RNA–Protein interactions for RNA: ENST00000480045.5

LRP8-209, Transcript of LDL receptor related protein 8, humanhuman

TSL 5

Gene LRP8, Length 3,231 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP8-209ENST00000480045 NISCHQ9Y2I1 1504 aa37.3■■■■□ 3.56
LRP8-209ENST00000480045 HRCP23327 699 aa33.81■■■■□ 3
LRP8-209ENST00000480045 SHROOM4Q9ULL8 1493 aa33.61■■■□□ 2.97
LRP8-209ENST00000480045 SUPT5HO00267 1087 aaKnown RBP33.56■■■□□ 2.96
LRP8-209ENST00000480045 PCGF6Q9BYE7 350 aa33.33■■■□□ 2.93
LRP8-209ENST00000480045 PPARGC1BQ86YN6 1023 aaKnown RBP33.33■■■□□ 2.93
LRP8-209ENST00000480045 MYO15BQ96JP2 1530 aa32.9■■■□□ 2.86
LRP8-209ENST00000480045 CHIC1Q5VXU3 224 aa32.79■■■□□ 2.84
LRP8-209ENST00000480045 PELP1Q8IZL8 1130 aaKnown RBP32.54■■■□□ 2.8
LRP8-209ENST00000480045 LOC105371045A0A1W2PR82 267 aa32.22■■■□□ 2.75
LRP8-209ENST00000480045 SCAF1Q9H7N4 1312 aaKnown RBP32.06■■■□□ 2.72
LRP8-209ENST00000480045 DCAF1Q9Y4B6 1507 aa32.05■■■□□ 2.72
LRP8-209ENST00000480045 TRIM26Q12899 539 aaPredicted RBP32.05■■■□□ 2.72
LRP8-209ENST00000480045 DCAF8L2P0C7V8 631 aa31.78■■■□□ 2.68
LRP8-209ENST00000480045 ZEB1P37275 1124 aaPredicted RBP31.73■■■□□ 2.67
LRP8-209ENST00000480045 ZCCHC6Q5VYS8 1495 aaKnown RBP31.69■■■□□ 2.66
LRP8-209ENST00000480045 CCDC180Q9P1Z9 1646 aa31.59■■■□□ 2.65
LRP8-209ENST00000480045 ACIN1Q9UKV3 1341 aaKnown RBP31.24■■■□□ 2.59
LRP8-209ENST00000480045 NEUROD1Q13562 356 aa31.22■■■□□ 2.59
LRP8-209ENST00000480045 MYT1Q01538 1121 aa31.21■■■□□ 2.59
LRP8-209ENST00000480045 EHMT2Q96KQ7 1210 aa31.15■■■□□ 2.58
LRP8-209ENST00000480045 FAM9AQ8IZU1 332 aaPredicted RBP31.11■■■□□ 2.57
LRP8-209ENST00000480045 GTF3C3Q9Y5Q9 886 aa31.1■■■□□ 2.57
LRP8-209ENST00000480045 TRIM41Q8WV44 630 aa30.91■■■□□ 2.54
LRP8-209ENST00000480045 CENPBP07199 599 aaPredicted RBP30.9■■■□□ 2.54
LRP8-209ENST00000480045 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.88■■■□□ 2.53
LRP8-209ENST00000480045 CCER1Q8TC90 406 aaPredicted RBP30.82■■■□□ 2.52
LRP8-209ENST00000480045 DIEXFQ68CQ4 756 aaKnown RBP30.78■■■□□ 2.52
LRP8-209ENST00000480045 YTHDC1Q96MU7 727 aaKnown RBP30.5■■■□□ 2.47
LRP8-209ENST00000480045 TTBK1Q5TCY1 1321 aaPredicted RBP30.39■■■□□ 2.46
LRP8-209ENST00000480045 RSF1Q96T23 1441 aaPredicted RBP30.17■■■□□ 2.42
LRP8-209ENST00000480045 ZNF316A6NFI3 1004 aaPredicted RBP30.11■■■□□ 2.41
LRP8-209ENST00000480045 ABCC9O60706 1549 aa30.08■■■□□ 2.41
LRP8-209ENST00000480045 RB1CC1Q8TDY2 1594 aa30.03■■■□□ 2.4
LRP8-209ENST00000480045 MIER1Q8N108 512 aa30■■■□□ 2.39
LRP8-209ENST00000480045 SCRIBQ14160 1630 aa29.67■■■□□ 2.34
LRP8-209ENST00000480045 HNRNPUL2Q1KMD3 747 aaKnown RBP29.57■■■□□ 2.32
LRP8-209ENST00000480045 SUPT16HQ9Y5B9 1047 aaKnown RBP29.51■■■□□ 2.31
LRP8-209ENST00000480045 CEP162Q5TB80 1403 aa29.46■■■□□ 2.31
LRP8-209ENST00000480045 WRNQ14191 1432 aaPredicted RBP eCLIP29.44■■■□□ 2.3
LRP8-209ENST00000480045 BCL11AQ9H165 835 aa29.44■■■□□ 2.3
LRP8-209ENST00000480045 ANP32EQ9BTT0 268 aa29.43■■■□□ 2.3
LRP8-209ENST00000480045 UBTFP17480 764 aaKnown RBP29.41■■■□□ 2.3
LRP8-209ENST00000480045 TSHZ2Q9NRE2 1034 aa29.38■■■□□ 2.29
LRP8-209ENST00000480045 CECR2Q9BXF3 1484 aa29.36■■■□□ 2.29
LRP8-209ENST00000480045 MROH2BQ7Z745 1585 aa29.24■■■□□ 2.27
LRP8-209ENST00000480045 CLSPNQ9HAW4 1339 aa29.21■■■□□ 2.27
LRP8-209ENST00000480045 CSRNP3Q8WYN3 585 aa29.2■■■□□ 2.27
LRP8-209ENST00000480045 TNIKQ9UKE5 1360 aa29.18■■■□□ 2.26
LRP8-209ENST00000480045 CCDC88BA6NC98 1476 aa29.16■■■□□ 2.26
LRP8-209ENST00000480045 SOGA1O94964 1423 aa29.13■■■□□ 2.25
LRP8-209ENST00000480045 BCANQ96GW7 911 aa29.13■■■□□ 2.25
LRP8-209ENST00000480045 WIZO95785 1651 aa29.11■■■□□ 2.25
LRP8-209ENST00000480045 ABCC8Q09428 1581 aa29.09■■■□□ 2.25
LRP8-209ENST00000480045 APLP2Q06481 763 aa28.95■■■□□ 2.23
LRP8-209ENST00000480045 RANGAP1P46060 587 aaPredicted RBP28.94■■■□□ 2.22
LRP8-209ENST00000480045 RUSC2Q8N2Y8 1516 aa28.93■■■□□ 2.22
LRP8-209ENST00000480045 KCNH8Q96L42 1107 aa28.88■■■□□ 2.21
LRP8-209ENST00000480045 FKBP8Q14318 412 aa28.84■■■□□ 2.21
LRP8-209ENST00000480045 EIF4G1Q04637 1599 aaKnown RBP28.84■■■□□ 2.21
LRP8-209ENST00000480045 GOLGA3Q08378 1498 aa28.79■■■□□ 2.2
LRP8-209ENST00000480045 BAZ1AQ9NRL2 1556 aaPredicted RBP28.75■■■□□ 2.19
LRP8-209ENST00000480045 RBM19Q9Y4C8 960 aaKnown RBP28.73■■■□□ 2.19
LRP8-209ENST00000480045 EEA1Q15075 1411 aa28.72■■■□□ 2.19
LRP8-209ENST00000480045 CLIP1P30622 1438 aa28.68■■■□□ 2.18
LRP8-209ENST00000480045 DHX57Q6P158 1386 aaKnown RBP28.68■■■□□ 2.18
LRP8-209ENST00000480045 ITGAEP38570 1179 aa28.65■■■□□ 2.18
LRP8-209ENST00000480045 NEFLP07196 543 aa28.61■■■□□ 2.17
LRP8-209ENST00000480045 VPS8Q8N3P4 1428 aa28.57■■■□□ 2.16
LRP8-209ENST00000480045 DDX10Q13206 875 aaKnown RBP28.47■■■□□ 2.15
LRP8-209ENST00000480045 NACADO15069 1562 aa28.47■■■□□ 2.15
LRP8-209ENST00000480045 CEP164Q9UPV0 1460 aa28.46■■■□□ 2.15
LRP8-209ENST00000480045 TRIM52Q96A61 297 aa28.46■■■□□ 2.15
LRP8-209ENST00000480045 TOP2AP11388 1531 aaKnown RBP28.44■■■□□ 2.14
LRP8-209ENST00000480045 MSH5O43196 834 aa28.43■■■□□ 2.14
LRP8-209ENST00000480045 SMARCA2P51531 1590 aa28.4■■■□□ 2.14
LRP8-209ENST00000480045 ERICH6Q7L0X2 663 aa28.38■■■□□ 2.13
LRP8-209ENST00000480045 KANK4Q5T7N3 995 aaPredicted RBP28.33■■■□□ 2.13
LRP8-209ENST00000480045 RAPGEF2Q9Y4G8 1499 aa28.27■■■□□ 2.12
LRP8-209ENST00000480045 HIRIP3Q9BW71 556 aaPredicted RBP28.26■■■□□ 2.11
LRP8-209ENST00000480045 KIF21BO75037 1637 aa28.23■■■□□ 2.11
LRP8-209ENST00000480045 IRX6P78412 446 aaPredicted RBP28.18■■■□□ 2.1
LRP8-209ENST00000480045 CDK11AQ9UQ88 783 aaPredicted RBP28.13■■■□□ 2.09
LRP8-209ENST00000480045 ANP32CO43423 234 aa28.12■■■□□ 2.09
LRP8-209ENST00000480045 PRKCSHP14314 528 aaPredicted RBP28.1■■■□□ 2.09
LRP8-209ENST00000480045 SIN3AQ96ST3 1273 aa28.1■■■□□ 2.09
LRP8-209ENST00000480045 SMARCA4P51532 1647 aa28.1■■■□□ 2.09
LRP8-209ENST00000480045 BAZ1BQ9UIG0 1483 aaKnown RBP28.09■■■□□ 2.09
LRP8-209ENST00000480045 FANCIQ9NVI1 1328 aa28.07■■■□□ 2.08
LRP8-209ENST00000480045 PPP1R15AO75807 674 aaPredicted RBP28.05■■■□□ 2.08
LRP8-209ENST00000480045 SYNJ1O43426 1573 aa28.05■■■□□ 2.08
LRP8-209ENST00000480045 CCNB3Q8WWL7 1395 aa28.03■■■□□ 2.08
LRP8-209ENST00000480045 RAB3GAP2Q9H2M9 1393 aa28.02■■■□□ 2.08
LRP8-209ENST00000480045 DEKP35659 375 aaKnown RBP28■■■□□ 2.07
LRP8-209ENST00000480045 RRBP1Q9P2E9 1410 aaKnown RBP27.98■■■□□ 2.07
LRP8-209ENST00000480045 CCER2I3L3R5 266 aa27.98■■■□□ 2.07
LRP8-209ENST00000480045 HNRNPUQ00839 825 aaKnown RBP eCLIP27.94■■■□□ 2.06
LRP8-209ENST00000480045 WDR97A6NE52 1622 aa27.92■■■□□ 2.06
LRP8-209ENST00000480045 ARAP1Q96P48 1450 aa27.91■■■□□ 2.06
LRP8-209ENST00000480045 MAPKBP1O60336 1514 aa27.88■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms