RNA–Protein interactions for RNA: ENST00000479155.1

LLGL1-202, Transcript of LLGL1, scribble cell polarity complex component, humanhuman

TSL 1 (best)

Gene LLGL1, Length 6,004 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LLGL1-202ENST00000479155 COL7A1Q02388 2944 aa6.25□□□□□ -1.41
LLGL1-202ENST00000479155 LCE3AQ5TA76 89 aa6.22□□□□□ -1.41
LLGL1-202ENST00000479155 DNAH9Q9NYC9 4486 aa6.18□□□□□ -1.42
LLGL1-202ENST00000479155 KRTAP23-1A1A580 65 aa6.17□□□□□ -1.42
LLGL1-202ENST00000479155 LORP23490 312 aaPredicted RBP6.11□□□□□ -1.43
LLGL1-202ENST00000479155 KRTAP10-5P60370 271 aa6.06□□□□□ -1.44
LLGL1-202ENST00000479155 KRTAP8-1Q8IUC2 63 aa6.03□□□□□ -1.44
LLGL1-202ENST00000479155 CSMD3Q7Z407 3707 aa5.98□□□□□ -1.45
LLGL1-202ENST00000479155 CMYA5Q8N3K9 4069 aa5.98□□□□□ -1.45
LLGL1-202ENST00000479155 DNAH1Q9P2D7 4330 aa5.97□□□□□ -1.45
LLGL1-202ENST00000479155 DNAH3Q8TD57 4116 aa5.96□□□□□ -1.46
LLGL1-202ENST00000479155 PLECQ15149 4684 aaKnown RBP5.91□□□□□ -1.46
LLGL1-202ENST00000479155 ANK2Q01484 3957 aa5.91□□□□□ -1.46
LLGL1-202ENST00000479155 VPS13DQ5THJ4 4388 aa5.89□□□□□ -1.47
LLGL1-202ENST00000479155 DNAH10Q8IVF4 4471 aa5.84□□□□□ -1.47
LLGL1-202ENST00000479155 DNAH17Q9UFH2 4485 aa5.84□□□□□ -1.47
LLGL1-202ENST00000479155 MT1HP80294 61 aa5.81□□□□□ -1.48
LLGL1-202ENST00000479155 KRTAP4-1Q9BYQ7 146 aa5.8□□□□□ -1.48
LLGL1-202ENST00000479155 DYNC2H1Q8NCM8 4307 aaKnown RBP5.77□□□□□ -1.49
LLGL1-202ENST00000479155 STARD9Q9P2P6 4700 aa5.75□□□□□ -1.49
LLGL1-202ENST00000479155 DNAH5Q8TE73 4624 aa5.75□□□□□ -1.49
LLGL1-202ENST00000479155 DNAH6Q9C0G6 4158 aa5.75□□□□□ -1.49
LLGL1-202ENST00000479155 DNAH2Q9P225 4427 aa5.74□□□□□ -1.49
LLGL1-202ENST00000479155 MT2AP02795 61 aa5.71□□□□□ -1.5
LLGL1-202ENST00000479155 DNAH11Q96DT5 4516 aa5.66□□□□□ -1.5
LLGL1-202ENST00000479155 SPRR2GQ9BYE4 73 aa5.66□□□□□ -1.5
LLGL1-202ENST00000479155 PRKDCP78527 4128 aaKnown RBP5.65□□□□□ -1.51
LLGL1-202ENST00000479155 SPRR2FQ96RM1 72 aa5.64□□□□□ -1.51
LLGL1-202ENST00000479155 DNAH8Q96JB1 4490 aa5.62□□□□□ -1.51
LLGL1-202ENST00000479155 KMT2AQ03164 3969 aa5.61□□□□□ -1.51
LLGL1-202ENST00000479155 FAT2Q9NYQ8 4349 aa5.6□□□□□ -1.51
LLGL1-202ENST00000479155 MT1FP04733 61 aa5.58□□□□□ -1.52
LLGL1-202ENST00000479155 KRTAP10-7P60409 375 aaPredicted RBP5.58□□□□□ -1.52
LLGL1-202ENST00000479155 DNAH7Q8WXX0 4024 aa5.57□□□□□ -1.52
LLGL1-202ENST00000479155 KRTAP19-5Q3LI72 72 aa5.57□□□□□ -1.52
LLGL1-202ENST00000479155 DYNC1H1Q14204 4646 aaKnown RBP5.56□□□□□ -1.52
LLGL1-202ENST00000479155 LRP1BQ9NZR2 4599 aa5.55□□□□□ -1.52
LLGL1-202ENST00000479155 LYSTQ99698 3801 aa5.5□□□□□ -1.53
LLGL1-202ENST00000479155 SACSQ9NZJ4 4579 aa5.49□□□□□ -1.53
LLGL1-202ENST00000479155 HECTD4Q9Y4D8 3996 aa5.49□□□□□ -1.53
LLGL1-202ENST00000479155 DNHD1Q96M86 4753 aa5.48□□□□□ -1.53
LLGL1-202ENST00000479155 LCE3CQ5T5A8 94 aa5.48□□□□□ -1.53
LLGL1-202ENST00000479155 FRAS1Q86XX4 4008 aa5.47□□□□□ -1.53
LLGL1-202ENST00000479155 VPS13BQ7Z7G8 4022 aa5.44□□□□□ -1.54
LLGL1-202ENST00000479155 FAT1Q14517 4588 aa5.41□□□□□ -1.54
LLGL1-202ENST00000479155 SPRR2EP22531 72 aa5.33□□□□□ -1.56
LLGL1-202ENST00000479155 SPRR2BP35325 72 aa5.33□□□□□ -1.56
LLGL1-202ENST00000479155 SPRR2AP35326 72 aa5.33□□□□□ -1.56
LLGL1-202ENST00000479155 KRTAP19-4Q3LI73 84 aa5.32□□□□□ -1.56
LLGL1-202ENST00000479155 RYR1P21817 5038 aa5.28□□□□□ -1.56
LLGL1-202ENST00000479155 APOBP04114 4563 aaKnown RBP5.27□□□□□ -1.57
LLGL1-202ENST00000479155 KRTAP19-8Q3LI54 63 aa5.22□□□□□ -1.57
LLGL1-202ENST00000479155 KRTAP17-1Q9BYP8 105 aa5.21□□□□□ -1.57
LLGL1-202ENST00000479155 LCE3BQ5TA77 95 aa5.21□□□□□ -1.58
LLGL1-202ENST00000479155 HYDINQ4G0P3 5121 aa5.19□□□□□ -1.58
LLGL1-202ENST00000479155 KRTAP19-1Q8IUB9 90 aa5.17□□□□□ -1.58
LLGL1-202ENST00000479155 PKD1P98161 4303 aa5.16□□□□□ -1.58
LLGL1-202ENST00000479155 SPRR2DP22532 72 aa5.15□□□□□ -1.58
LLGL1-202ENST00000479155 RYR2Q92736 4967 aa5.14□□□□□ -1.59
LLGL1-202ENST00000479155 MT1XP80297 61 aa5.12□□□□□ -1.59
LLGL1-202ENST00000479155 HSPG2P98160 4391 aa5.11□□□□□ -1.59
LLGL1-202ENST00000479155 FAT3Q8TDW7 4589 aa5.11□□□□□ -1.59
LLGL1-202ENST00000479155 PKHD1L1Q86WI1 4243 aa5.09□□□□□ -1.59
LLGL1-202ENST00000479155 MYCBP2O75592 4640 aa5.09□□□□□ -1.6
LLGL1-202ENST00000479155 MT1GP13640 62 aa5.08□□□□□ -1.6
LLGL1-202ENST00000479155 RYR3Q15413 4870 aa5.07□□□□□ -1.6
LLGL1-202ENST00000479155 LCE2BO14633 110 aa5.06□□□□□ -1.6
LLGL1-202ENST00000479155 MT1BP07438 61 aa5.03□□□□□ -1.6
LLGL1-202ENST00000479155 PKHD1P08F94 4074 aa5.02□□□□□ -1.61
LLGL1-202ENST00000479155 LRP1Q07954 4544 aaKnown RBP5.02□□□□□ -1.61
LLGL1-202ENST00000479155 KRTAP9-8Q9BYQ0 159 aa4.98□□□□□ -1.61
LLGL1-202ENST00000479155 TNXBP22105 4242 aa4.98□□□□□ -1.61
LLGL1-202ENST00000479155 KRTAP12-4P60329 112 aa4.98□□□□□ -1.61
LLGL1-202ENST00000479155 HERC1Q15751 4861 aa4.98□□□□□ -1.61
LLGL1-202ENST00000479155 KIAA1109Q2LD37 5005 aa4.95□□□□□ -1.62
LLGL1-202ENST00000479155 KRTAP4-8A0A0G2JLE6 195 aa4.94□□□□□ -1.62
LLGL1-202ENST00000479155 KRTAP4-8Q9BYQ9 185 aa4.94□□□□□ -1.62
LLGL1-202ENST00000479155 KRTAP9-3Q9BYQ3 159 aa4.89□□□□□ -1.63
LLGL1-202ENST00000479155 LCE2CQ5TA81 110 aa4.83□□□□□ -1.64
LLGL1-202ENST00000479155 LCE3DQ9BYE3 92 aa4.83□□□□□ -1.64
LLGL1-202ENST00000479155 SPRR5A0A1B0GTR4 108 aa4.79□□□□□ -1.64
LLGL1-202ENST00000479155 LPAP08519 4548 aa4.78□□□□□ -1.64
LLGL1-202ENST00000479155 BIRC6Q9NR09 4857 aa4.77□□□□□ -1.65
LLGL1-202ENST00000479155 MUC17Q685J3 4493 aa4.75□□□□□ -1.65
LLGL1-202ENST00000479155 LCE3EQ5T5B0 92 aa4.74□□□□□ -1.65
LLGL1-202ENST00000479155 KRTAP19-3Q7Z4W3 81 aa4.74□□□□□ -1.65
LLGL1-202ENST00000479155 LCE2DQ5TA82 110 aaPredicted RBP4.73□□□□□ -1.65
LLGL1-202ENST00000479155 LRP2P98164 4655 aa4.72□□□□□ -1.65
LLGL1-202ENST00000479155 KMT2CQ8NEZ4 4911 aaKnown RBP4.68□□□□□ -1.66
LLGL1-202ENST00000479155 HERC2O95714 4834 aa4.68□□□□□ -1.66
LLGL1-202ENST00000479155 MT1LQ93083 61 aa4.67□□□□□ -1.66
LLGL1-202ENST00000479155 MT4P47944 62 aa4.67□□□□□ -1.66
LLGL1-202ENST00000479155 KRTAP4-7Q9BYR0 210 aa4.66□□□□□ -1.66
LLGL1-202ENST00000479155 MT1EP04732 61 aa4.63□□□□□ -1.67
LLGL1-202ENST00000479155 KRTAP19-2Q3LHN2 52 aa4.58□□□□□ -1.68
LLGL1-202ENST00000479155 EPPK1P58107 5090 aaKnown RBP4.53□□□□□ -1.68
LLGL1-202ENST00000479155 PCLOQ9Y6V0 5065 aa4.51□□□□□ -1.69
LLGL1-202ENST00000479155 LCE1BQ5T7P3 118 aa4.51□□□□□ -1.69
LLGL1-202ENST00000479155 MT1MQ8N339 61 aa4.51□□□□□ -1.69
LLGL1-202ENST00000479155 MT3P25713 68 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 119.3 ms