RNA–Protein interactions for RNA: ENST00000479003.5

CHKB-208, Transcript of choline kinase beta, humanhuman

TSL 2

Gene CHKB, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-208ENST00000479003 C20orf166-AS1Q96NR2 134 aa14.95□□□□□ -0.02
CHKB-208ENST00000479003 C9orf92A6NGG3 77 aa14.93□□□□□ -0.02
CHKB-208ENST00000479003 UQCR11O14957 56 aa14.82□□□□□ -0.04
CHKB-208ENST00000479003 LINC01554Q52M75 96 aa14.78□□□□□ -0.04
CHKB-208ENST00000479003 MIR22HGQ0VDD5 57 aa14.78□□□□□ -0.04
CHKB-208ENST00000479003 PRAC1Q96KF2 57 aa14.77□□□□□ -0.05
CHKB-208ENST00000479003 ADM2Q7Z4H4 148 aa14.64□□□□□ -0.07
CHKB-208ENST00000479003 KRTAP3-1Q9BYR8 98 aa14.63□□□□□ -0.07
CHKB-208ENST00000479003 J3QL48 77 aa14.56□□□□□ -0.08
CHKB-208ENST00000479003 PCLOQ9Y6V0 5065 aa14.5□□□□□ -0.09
CHKB-208ENST00000479003 COX6B2Q6YFQ2 88 aa14.43□□□□□ -0.1
CHKB-208ENST00000479003 CSAG1Q6PB30 78 aa14.38□□□□□ -0.11
CHKB-208ENST00000479003 XP32Q5T750 250 aa14.37□□□□□ -0.11
CHKB-208ENST00000479003 LPAP08519 4548 aa14.33□□□□□ -0.11
CHKB-208ENST00000479003 TPRXLQ17RH7 258 aa14.31□□□□□ -0.12
CHKB-208ENST00000479003 RPL37P61927 97 aaKnown RBP14.3□□□□□ -0.12
CHKB-208ENST00000479003 H0YAA0 97 aa14.23□□□□□ -0.13
CHKB-208ENST00000479003 LRP2P98164 4655 aa14.22□□□□□ -0.13
CHKB-208ENST00000479003 A0A1B0GU33 70 aa14.21□□□□□ -0.13
CHKB-208ENST00000479003 H1FX-AS1Q4G0G2 97 aa14.19□□□□□ -0.14
CHKB-208ENST00000479003 HERC1Q15751 4861 aa14.17□□□□□ -0.14
CHKB-208ENST00000479003 H3BS24 57 aa14.14□□□□□ -0.15
CHKB-208ENST00000479003 KRTAP25-1Q3LHN0 102 aa14.05□□□□□ -0.16
CHKB-208ENST00000479003 KRTAP3-3Q9BYR6 98 aa14.03□□□□□ -0.16
CHKB-208ENST00000479003 HMCN2Q8NDA2 5059 aa13.93□□□□□ -0.18
CHKB-208ENST00000479003 S4R3F8 94 aa13.91□□□□□ -0.18
CHKB-208ENST00000479003 KRTAP10-6P60371 365 aaPredicted RBP13.87□□□□□ -0.19
CHKB-208ENST00000479003 K7ERS5 55 aa13.84□□□□□ -0.19
CHKB-208ENST00000479003 ROMO1P60602 79 aa13.83□□□□□ -0.2
CHKB-208ENST00000479003 KRTAP3-2Q9BYR7 98 aa13.79□□□□□ -0.2
CHKB-208ENST00000479003 SEC61BP60468 96 aaKnown RBP13.78□□□□□ -0.2
CHKB-208ENST00000479003 MUC17Q685J3 4493 aa13.67□□□□□ -0.22
CHKB-208ENST00000479003 KRTAP13-4Q3LI77 160 aa13.66□□□□□ -0.22
CHKB-208ENST00000479003 KRTAP4-1Q9BYQ7 146 aa13.64□□□□□ -0.23
CHKB-208ENST00000479003 P0C880 135 aa13.57□□□□□ -0.24
CHKB-208ENST00000479003 MUC2Q02817 5179 aa13.55□□□□□ -0.24
CHKB-208ENST00000479003 A0A0D9SG42 100 aa13.48□□□□□ -0.25
CHKB-208ENST00000479003 UBR4Q5T4S7 5183 aa13.41□□□□□ -0.26
CHKB-208ENST00000479003 CRIPTQ9P021 101 aa13.27□□□□□ -0.29
CHKB-208ENST00000479003 KRTAP19-2Q3LHN2 52 aa13.24□□□□□ -0.29
CHKB-208ENST00000479003 M0QZ58 72 aa13.21□□□□□ -0.3
CHKB-208ENST00000479003 KRTAP12-2P59991 146 aa13.2□□□□□ -0.3
CHKB-208ENST00000479003 RNF213Q63HN8 5207 aa13.2□□□□□ -0.3
CHKB-208ENST00000479003 KRTAP12-1P59990 96 aa13.16□□□□□ -0.3
CHKB-208ENST00000479003 SPINT4Q6UDR6 99 aa13.12□□□□□ -0.31
CHKB-208ENST00000479003 FLGP20930 4061 aaPredicted RBP12.97□□□□□ -0.33
CHKB-208ENST00000479003 FAT4Q6V0I7 4981 aa12.96□□□□□ -0.33
CHKB-208ENST00000479003 KRTAP15-1Q3LI76 137 aa12.94□□□□□ -0.34
CHKB-208ENST00000479003 LCE2CQ5TA81 110 aa12.93□□□□□ -0.34
CHKB-208ENST00000479003 R4GN34 69 aa12.86□□□□□ -0.35
CHKB-208ENST00000479003 C10orf95Q9H7T3 257 aa12.83□□□□□ -0.35
CHKB-208ENST00000479003 LORP23490 312 aaPredicted RBP12.74□□□□□ -0.37
CHKB-208ENST00000479003 NDUFAF8A1L188 74 aa12.71□□□□□ -0.37
CHKB-208ENST00000479003 MT1HP80294 61 aa12.66□□□□□ -0.38
CHKB-208ENST00000479003 M0R2T5 61 aa12.52□□□□□ -0.4
CHKB-208ENST00000479003 KRTAP9-8Q9BYQ0 159 aa12.19□□□□□ -0.46
CHKB-208ENST00000479003 CAMK2N1Q7Z7J9 78 aa12.18□□□□□ -0.46
CHKB-208ENST00000479003 MT2AP02795 61 aa12.16□□□□□ -0.46
CHKB-208ENST00000479003 LCE2AQ5TA79 106 aaPredicted RBP12.16□□□□□ -0.46
CHKB-208ENST00000479003 MT1FP04733 61 aa12.11□□□□□ -0.47
CHKB-208ENST00000479003 PLAC4Q8WY50 150 aa12.08□□□□□ -0.47
CHKB-208ENST00000479003 KRTAP10-10P60014 251 aa12.04□□□□□ -0.48
CHKB-208ENST00000479003 PP632Q6XCG6 107 aa11.95□□□□□ -0.5
CHKB-208ENST00000479003 KRTAP19-1Q8IUB9 90 aa11.89□□□□□ -0.51
CHKB-208ENST00000479003 SPRR2GQ9BYE4 73 aa11.87□□□□□ -0.51
CHKB-208ENST00000479003 LUZP6Q538Z0 58 aa11.78□□□□□ -0.52
CHKB-208ENST00000479003 TNP1P09430 55 aa11.75□□□□□ -0.53
CHKB-208ENST00000479003 KRTAP9-3Q9BYQ3 159 aa11.74□□□□□ -0.53
CHKB-208ENST00000479003 KRTAP23-1A1A580 65 aa11.66□□□□□ -0.54
CHKB-208ENST00000479003 A0A0A0MQY5 61 aa11.66□□□□□ -0.54
CHKB-208ENST00000479003 KRTAP19-8Q3LI54 63 aa11.54□□□□□ -0.56
CHKB-208ENST00000479003 LCE2BO14633 110 aa11.45□□□□□ -0.58
CHKB-208ENST00000479003 MT1BP07438 61 aa11.45□□□□□ -0.58
CHKB-208ENST00000479003 USH2AO75445 5202 aa11.27□□□□□ -0.6
CHKB-208ENST00000479003 SPRR5A0A1B0GTR4 108 aa11.27□□□□□ -0.61
CHKB-208ENST00000479003 LCE3AQ5TA76 89 aa11.14□□□□□ -0.63
CHKB-208ENST00000479003 MT1XP80297 61 aa11.09□□□□□ -0.63
CHKB-208ENST00000479003 KRTAP10-5P60370 271 aa11.06□□□□□ -0.64
CHKB-208ENST00000479003 LCE2DQ5TA82 110 aaPredicted RBP10.96□□□□□ -0.66
CHKB-208ENST00000479003 FSIP2Q5CZC0 6907 aa10.93□□□□□ -0.66
CHKB-208ENST00000479003 KRTAP8-1Q8IUC2 63 aa10.92□□□□□ -0.66
CHKB-208ENST00000479003 SSPOA2VEC9 5147 aa10.88□□□□□ -0.67
CHKB-208ENST00000479003 PRO2289Q9P1D8 64 aa10.86□□□□□ -0.67
CHKB-208ENST00000479003 KRTAP10-12P60413 245 aa10.78□□□□□ -0.68
CHKB-208ENST00000479003 KRTAP10-7P60409 375 aaPredicted RBP10.69□□□□□ -0.7
CHKB-208ENST00000479003 KRTAP19-6Q3LI70 58 aa10.67□□□□□ -0.7
CHKB-208ENST00000479003 KRTAP12-3P60328 96 aa10.63□□□□□ -0.71
CHKB-208ENST00000479003 KRTAP9-2Q9BYQ4 174 aa10.61□□□□□ -0.71
CHKB-208ENST00000479003 INE1O15225 51 aa10.55□□□□□ -0.72
CHKB-208ENST00000479003 KMT2DO14686 5537 aa10.43□□□□□ -0.74
CHKB-208ENST00000479003 FCGBPQ9Y6R7 5405 aaPredicted RBP10.4□□□□□ -0.74
CHKB-208ENST00000479003 KRTAP4-8A0A0G2JLE6 195 aa10.28□□□□□ -0.76
CHKB-208ENST00000479003 KRTAP4-8Q9BYQ9 185 aa10.28□□□□□ -0.76
CHKB-208ENST00000479003 KRTAP19-5Q3LI72 72 aa10.23□□□□□ -0.77
CHKB-208ENST00000479003 CRCT1Q9UGL9 99 aa10.22□□□□□ -0.77
CHKB-208ENST00000479003 LCE3CQ5T5A8 94 aa10.01□□□□□ -0.81
CHKB-208ENST00000479003 MACF1Q9UPN3 7388 aaKnown RBP9.92□□□□□ -0.82
CHKB-208ENST00000479003 KRTAP19-7Q3SYF9 63 aa9.89□□□□□ -0.83
CHKB-208ENST00000479003 KRTAP9-6A0A140TA67 174 aa9.74□□□□□ -0.85
CHKB-208ENST00000479003 MT1EP04732 61 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms