RNA–Protein interactions for RNA: ENST00000478454.5

CCNL1-220, Transcript of cyclin L1, humanhuman

TSL 4

Gene CCNL1, Length 580 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-220ENST00000478454 SPRR1AP35321 89 aa0.8□□□□□ -2.28
CCNL1-220ENST00000478454 KLK9Q2XQG4 91 aa0.8□□□□□ -2.28
CCNL1-220ENST00000478454 H1FX-AS1Q4G0G2 97 aa0.8□□□□□ -2.28
CCNL1-220ENST00000478454 DEFB105AQ8NG35 78 aa0.8□□□□□ -2.28
CCNL1-220ENST00000478454 PRKDCP78527 4128 aaKnown RBP0.8□□□□□ -2.28
CCNL1-220ENST00000478454 COL7A1Q02388 2944 aa0.79□□□□□ -2.28
CCNL1-220ENST00000478454 MUC16Q8WXI7 14507 aa0.79□□□□□ -2.28
CCNL1-220ENST00000478454 SVEP1Q4LDE5 3571 aa0.79□□□□□ -2.28
CCNL1-220ENST00000478454 A0A0D9SG42 100 aa0.79□□□□□ -2.28
CCNL1-220ENST00000478454 LELP1Q5T871 98 aa0.79□□□□□ -2.28
CCNL1-220ENST00000478454 WFDC13Q8IUB5 93 aa0.79□□□□□ -2.28
CCNL1-220ENST00000478454 DEFB108BQ8NET1 73 aa0.79□□□□□ -2.28
CCNL1-220ENST00000478454 CMYA5Q8N3K9 4069 aa0.79□□□□□ -2.28
CCNL1-220ENST00000478454 LYNX1G3V0Z9 82 aa0.78□□□□□ -2.28
CCNL1-220ENST00000478454 SPRR1BP22528 89 aa0.78□□□□□ -2.28
CCNL1-220ENST00000478454 LINC01590Q5TEZ4 76 aa0.78□□□□□ -2.28
CCNL1-220ENST00000478454 DSTQ03001 7570 aaKnown RBP0.77□□□□□ -2.29
CCNL1-220ENST00000478454 DNAH7Q8WXX0 4024 aa0.77□□□□□ -2.29
CCNL1-220ENST00000478454 H3BUA1 57 aa0.77□□□□□ -2.29
CCNL1-220ENST00000478454 SNRPGP62308 76 aaKnown RBP0.77□□□□□ -2.29
CCNL1-220ENST00000478454 RPS27LQ71UM5 84 aaKnown RBP0.77□□□□□ -2.29
CCNL1-220ENST00000478454 SMR3AQ99954 134 aa0.77□□□□□ -2.29
CCNL1-220ENST00000478454 C6orf48Q9UBA6 75 aa0.77□□□□□ -2.29
CCNL1-220ENST00000478454 DMBT1Q9UGM3 2413 aaPredicted RBP0.77□□□□□ -2.29
CCNL1-220ENST00000478454 CUBNO60494 3623 aa0.76□□□□□ -2.29
CCNL1-220ENST00000478454 H0YAA0 97 aa0.76□□□□□ -2.29
CCNL1-220ENST00000478454 IAPPP10997 89 aa0.76□□□□□ -2.29
CCNL1-220ENST00000478454 Q5VSD8 79 aa0.76□□□□□ -2.29
CCNL1-220ENST00000478454 DNHD1Q96M86 4753 aa0.76□□□□□ -2.29
CCNL1-220ENST00000478454 CSMD3Q7Z407 3707 aa0.76□□□□□ -2.29
CCNL1-220ENST00000478454 DNAH1Q9P2D7 4330 aa0.75□□□□□ -2.29
CCNL1-220ENST00000478454 SMIM2Q9BVW6 85 aa0.75□□□□□ -2.29
CCNL1-220ENST00000478454 DYNC2H1Q8NCM8 4307 aaKnown RBP0.75□□□□□ -2.29
CCNL1-220ENST00000478454 RYR1P21817 5038 aa0.75□□□□□ -2.29
CCNL1-220ENST00000478454 AHNAK2Q8IVF2 5795 aa0.75□□□□□ -2.29
CCNL1-220ENST00000478454 LYSTQ99698 3801 aa0.74□□□□□ -2.29
CCNL1-220ENST00000478454 DNAH6Q9C0G6 4158 aa0.74□□□□□ -2.29
CCNL1-220ENST00000478454 DEFB130BP0DP73 79 aa0.74□□□□□ -2.29
CCNL1-220ENST00000478454 DEFB130AP0DP74 79 aa0.74□□□□□ -2.29
CCNL1-220ENST00000478454 KRTAP20-1Q3LI63 56 aa0.74□□□□□ -2.29
CCNL1-220ENST00000478454 SRRM2Q9UQ35 2752 aaKnown RBP0.74□□□□□ -2.29
CCNL1-220ENST00000478454 DNAH9Q9NYC9 4486 aa0.74□□□□□ -2.29
CCNL1-220ENST00000478454 A8MTW9 85 aa0.73□□□□□ -2.29
CCNL1-220ENST00000478454 H3BUX3 64 aa0.73□□□□□ -2.29
CCNL1-220ENST00000478454 ALMS1Q8TCU4 4167 aa0.73□□□□□ -2.29
CCNL1-220ENST00000478454 H3BNG1 76 aa0.72□□□□□ -2.29
CCNL1-220ENST00000478454 RPS27P42677 84 aaKnown RBP0.72□□□□□ -2.29
CCNL1-220ENST00000478454 WFDC10BQ8IUB3 73 aa0.72□□□□□ -2.29
CCNL1-220ENST00000478454 TMEM167AQ8TBQ9 72 aa0.72□□□□□ -2.29
CCNL1-220ENST00000478454 KMT2AQ03164 3969 aa0.72□□□□□ -2.29
CCNL1-220ENST00000478454 AHNAKQ09666 5890 aaKnown RBP0.71□□□□□ -2.3
CCNL1-220ENST00000478454 RYR2Q92736 4967 aa0.71□□□□□ -2.3
CCNL1-220ENST00000478454 HECTD4Q9Y4D8 3996 aa0.71□□□□□ -2.3
CCNL1-220ENST00000478454 RYR3Q15413 4870 aa0.71□□□□□ -2.3
CCNL1-220ENST00000478454 WT1-ASQ06250 92 aa0.71□□□□□ -2.3
CCNL1-220ENST00000478454 DNAH17Q9UFH2 4485 aa0.71□□□□□ -2.3
CCNL1-220ENST00000478454 HUWE1Q7Z6Z7 4374 aaKnown RBP0.71□□□□□ -2.3
CCNL1-220ENST00000478454 NDUFA1O15239 70 aa0.7□□□□□ -2.3
CCNL1-220ENST00000478454 PRLHP81277 87 aa0.7□□□□□ -2.3
CCNL1-220ENST00000478454 HYDINQ4G0P3 5121 aa0.7□□□□□ -2.3
CCNL1-220ENST00000478454 KMT2CQ8NEZ4 4911 aaKnown RBP0.7□□□□□ -2.3
CCNL1-220ENST00000478454 EPPK1P58107 5090 aaKnown RBP0.7□□□□□ -2.3
CCNL1-220ENST00000478454 BIRC6Q9NR09 4857 aa0.69□□□□□ -2.3
CCNL1-220ENST00000478454 K7EIM0 57 aa0.69□□□□□ -2.3
CCNL1-220ENST00000478454 PRCDQ00LT1 54 aa0.69□□□□□ -2.3
CCNL1-220ENST00000478454 ARHGAP5-AS1Q96IT6 56 aa0.69□□□□□ -2.3
CCNL1-220ENST00000478454 VPS13DQ5THJ4 4388 aa0.69□□□□□ -2.3
CCNL1-220ENST00000478454 DNAH10Q8IVF4 4471 aa0.68□□□□□ -2.3
CCNL1-220ENST00000478454 DNAH11Q96DT5 4516 aa0.68□□□□□ -2.3
CCNL1-220ENST00000478454 FRAS1Q86XX4 4008 aa0.68□□□□□ -2.3
CCNL1-220ENST00000478454 RPL39P5Q59GN2 51 aa0.68□□□□□ -2.3
CCNL1-220ENST00000478454 RHPN1-AS1Q9BWJ2 59 aa0.68□□□□□ -2.3
CCNL1-220ENST00000478454 PKHD1P08F94 4074 aa0.68□□□□□ -2.3
CCNL1-220ENST00000478454 VPS13BQ7Z7G8 4022 aa0.67□□□□□ -2.3
CCNL1-220ENST00000478454 STARD9Q9P2P6 4700 aa0.67□□□□□ -2.3
CCNL1-220ENST00000478454 SACSQ9NZJ4 4579 aa0.67□□□□□ -2.3
CCNL1-220ENST00000478454 DNAH2Q9P225 4427 aa0.67□□□□□ -2.3
CCNL1-220ENST00000478454 PLECQ15149 4684 aaKnown RBP0.67□□□□□ -2.3
CCNL1-220ENST00000478454 SPART-AS1P0CW21 52 aa0.67□□□□□ -2.3
CCNL1-220ENST00000478454 ABCA13Q86UQ4 5058 aa0.67□□□□□ -2.3
CCNL1-220ENST00000478454 PKD1P98161 4303 aa0.67□□□□□ -2.3
CCNL1-220ENST00000478454 FAT2Q9NYQ8 4349 aa0.66□□□□□ -2.3
CCNL1-220ENST00000478454 DEFB136Q30KP8 78 aa0.66□□□□□ -2.3
CCNL1-220ENST00000478454 LEAP2Q969E1 77 aa0.66□□□□□ -2.3
CCNL1-220ENST00000478454 S4R3F8 94 aa0.66□□□□□ -2.3
CCNL1-220ENST00000478454 HERC1Q15751 4861 aa0.65□□□□□ -2.3
CCNL1-220ENST00000478454 DEFB131AP59861 70 aa0.65□□□□□ -2.31
CCNL1-220ENST00000478454 DEFB135Q30KP9 77 aa0.65□□□□□ -2.31
CCNL1-220ENST00000478454 LINC01556Q5JQF7 62 aa0.65□□□□□ -2.31
CCNL1-220ENST00000478454 SPINK6Q6UWN8 80 aa0.65□□□□□ -2.31
CCNL1-220ENST00000478454 TTTY10Q9BZA0 68 aa0.65□□□□□ -2.31
CCNL1-220ENST00000478454 APOBP04114 4563 aaKnown RBP0.64□□□□□ -2.31
CCNL1-220ENST00000478454 H3BSH0 61 aa0.64□□□□□ -2.31
CCNL1-220ENST00000478454 DEFB104AQ8WTQ1 72 aa0.64□□□□□ -2.31
CCNL1-220ENST00000478454 LRP1BQ9NZR2 4599 aa0.64□□□□□ -2.31
CCNL1-220ENST00000478454 SSPOA2VEC9 5147 aa0.64□□□□□ -2.31
CCNL1-220ENST00000478454 HERC2O95714 4834 aa0.64□□□□□ -2.31
CCNL1-220ENST00000478454 DNAH8Q96JB1 4490 aa0.64□□□□□ -2.31
CCNL1-220ENST00000478454 HSPG2P98160 4391 aa0.64□□□□□ -2.31
CCNL1-220ENST00000478454 DNAH5Q8TE73 4624 aa0.63□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms