RNA–Protein interactions for RNA: ENST00000478389.5

NELFCD-206, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 2

Gene NELFCD, Length 3,581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-206ENST00000478389 DNAH17Q9UFH2 4485 aa4.48□□□□□ -1.69
NELFCD-206ENST00000478389 KRTAP10-1P60331 282 aa4.47□□□□□ -1.69
NELFCD-206ENST00000478389 RYR3Q15413 4870 aa4.47□□□□□ -1.69
NELFCD-206ENST00000478389 KRTAP3-1Q9BYR8 98 aa4.45□□□□□ -1.7
NELFCD-206ENST00000478389 A0A0D9SG42 100 aa4.45□□□□□ -1.7
NELFCD-206ENST00000478389 RYR2Q92736 4967 aa4.45□□□□□ -1.7
NELFCD-206ENST00000478389 C10orf95Q9H7T3 257 aa4.43□□□□□ -1.7
NELFCD-206ENST00000478389 PRO2289Q9P1D8 64 aa4.43□□□□□ -1.7
NELFCD-206ENST00000478389 A0A1B0GVY2 172 aa4.43□□□□□ -1.7
NELFCD-206ENST00000478389 RPS29P62273 56 aaKnown RBP4.42□□□□□ -1.7
NELFCD-206ENST00000478389 PKHD1P08F94 4074 aa4.4□□□□□ -1.71
NELFCD-206ENST00000478389 KRTAP1-4P0C5Y4 121 aa4.4□□□□□ -1.71
NELFCD-206ENST00000478389 DNAH6Q9C0G6 4158 aa4.4□□□□□ -1.71
NELFCD-206ENST00000478389 DNAH5Q8TE73 4624 aa4.38□□□□□ -1.71
NELFCD-206ENST00000478389 DNAH11Q96DT5 4516 aa4.37□□□□□ -1.71
NELFCD-206ENST00000478389 S4R3F8 94 aa4.36□□□□□ -1.71
NELFCD-206ENST00000478389 KRTAP10-6P60371 365 aaPredicted RBP4.35□□□□□ -1.71
NELFCD-206ENST00000478389 Q5VSD8 79 aa4.35□□□□□ -1.71
NELFCD-206ENST00000478389 EPPK1P58107 5090 aaKnown RBP4.35□□□□□ -1.71
NELFCD-206ENST00000478389 KRTAP13-4Q3LI77 160 aa4.34□□□□□ -1.72
NELFCD-206ENST00000478389 KIAA1109Q2LD37 5005 aa4.33□□□□□ -1.72
NELFCD-206ENST00000478389 PKD1P98161 4303 aa4.32□□□□□ -1.72
NELFCD-206ENST00000478389 KRTAP10-8P60410 259 aa4.32□□□□□ -1.72
NELFCD-206ENST00000478389 FAT2Q9NYQ8 4349 aa4.3□□□□□ -1.72
NELFCD-206ENST00000478389 XP32Q5T750 250 aa4.29□□□□□ -1.72
NELFCD-206ENST00000478389 FAT1Q14517 4588 aa4.28□□□□□ -1.72
NELFCD-206ENST00000478389 LRP1BQ9NZR2 4599 aa4.28□□□□□ -1.72
NELFCD-206ENST00000478389 DYNC1H1Q14204 4646 aaKnown RBP4.28□□□□□ -1.72
NELFCD-206ENST00000478389 KRTAP12-2P59991 146 aa4.27□□□□□ -1.73
NELFCD-206ENST00000478389 KRTAP4-5Q9BYR2 181 aa4.26□□□□□ -1.73
NELFCD-206ENST00000478389 VPS13BQ7Z7G8 4022 aa4.25□□□□□ -1.73
NELFCD-206ENST00000478389 BIRC6Q9NR09 4857 aa4.24□□□□□ -1.73
NELFCD-206ENST00000478389 KRTAP12-1P59990 96 aa4.23□□□□□ -1.73
NELFCD-206ENST00000478389 PLAC4Q8WY50 150 aa4.21□□□□□ -1.74
NELFCD-206ENST00000478389 LORP23490 312 aaPredicted RBP4.2□□□□□ -1.74
NELFCD-206ENST00000478389 M0QZ58 72 aa4.2□□□□□ -1.74
NELFCD-206ENST00000478389 KRTAP17-1Q9BYP8 105 aa4.19□□□□□ -1.74
NELFCD-206ENST00000478389 APOBP04114 4563 aaKnown RBP4.18□□□□□ -1.74
NELFCD-206ENST00000478389 RYR1P21817 5038 aa4.18□□□□□ -1.74
NELFCD-206ENST00000478389 MYCBP2O75592 4640 aa4.17□□□□□ -1.74
NELFCD-206ENST00000478389 HSPG2P98160 4391 aa4.15□□□□□ -1.74
NELFCD-206ENST00000478389 HERC2O95714 4834 aa4.13□□□□□ -1.75
NELFCD-206ENST00000478389 LRP1Q07954 4544 aaKnown RBP4.13□□□□□ -1.75
NELFCD-206ENST00000478389 PKHD1L1Q86WI1 4243 aa4.12□□□□□ -1.75
NELFCD-206ENST00000478389 KRTAP10-4P60372 401 aaPredicted RBP4.11□□□□□ -1.75
NELFCD-206ENST00000478389 FAT3Q8TDW7 4589 aa4.11□□□□□ -1.75
NELFCD-206ENST00000478389 ABCA13Q86UQ4 5058 aa4.07□□□□□ -1.76
NELFCD-206ENST00000478389 PP632Q6XCG6 107 aa4.06□□□□□ -1.76
NELFCD-206ENST00000478389 PCLOQ9Y6V0 5065 aa4.06□□□□□ -1.76
NELFCD-206ENST00000478389 MT1HL1P0DM35 61 aa4.02□□□□□ -1.77
NELFCD-206ENST00000478389 HERC1Q15751 4861 aa4□□□□□ -1.77
NELFCD-206ENST00000478389 INE1O15225 51 aa3.98□□□□□ -1.77
NELFCD-206ENST00000478389 TNXBP22105 4242 aa3.94□□□□□ -1.78
NELFCD-206ENST00000478389 MUC2Q02817 5179 aa3.9□□□□□ -1.78
NELFCD-206ENST00000478389 RNF213Q63HN8 5207 aa3.88□□□□□ -1.79
NELFCD-206ENST00000478389 LPAP08519 4548 aa3.88□□□□□ -1.79
NELFCD-206ENST00000478389 LRP2P98164 4655 aa3.87□□□□□ -1.79
NELFCD-206ENST00000478389 UBR4Q5T4S7 5183 aa3.84□□□□□ -1.79
NELFCD-206ENST00000478389 SPRR5A0A1B0GTR4 108 aa3.82□□□□□ -1.8
NELFCD-206ENST00000478389 TNP1P09430 55 aa3.77□□□□□ -1.81
NELFCD-206ENST00000478389 HMCN2Q8NDA2 5059 aa3.73□□□□□ -1.81
NELFCD-206ENST00000478389 FAT4Q6V0I7 4981 aa3.71□□□□□ -1.82
NELFCD-206ENST00000478389 M0R2T5 61 aa3.64□□□□□ -1.83
NELFCD-206ENST00000478389 KRTAP4-1Q9BYQ7 146 aa3.59□□□□□ -1.83
NELFCD-206ENST00000478389 FSIP2Q5CZC0 6907 aa3.57□□□□□ -1.84
NELFCD-206ENST00000478389 MUC17Q685J3 4493 aa3.56□□□□□ -1.84
NELFCD-206ENST00000478389 LCE5AQ5TCM9 118 aa3.52□□□□□ -1.85
NELFCD-206ENST00000478389 KRTAP19-2Q3LHN2 52 aa3.47□□□□□ -1.85
NELFCD-206ENST00000478389 LCE3AQ5TA76 89 aa3.42□□□□□ -1.86
NELFCD-206ENST00000478389 LCE1FQ5T754 118 aa3.42□□□□□ -1.86
NELFCD-206ENST00000478389 MT1HP80294 61 aa3.41□□□□□ -1.86
NELFCD-206ENST00000478389 KRTAP2-2Q9BYT5 123 aa3.41□□□□□ -1.86
NELFCD-206ENST00000478389 LOC100996750A0A140TA64 210 aa3.4□□□□□ -1.86
NELFCD-206ENST00000478389 KRTAP4-6Q9BYQ5 205 aa3.4□□□□□ -1.86
NELFCD-206ENST00000478389 FLGP20930 4061 aaPredicted RBP3.38□□□□□ -1.87
NELFCD-206ENST00000478389 KRTAP8-1Q8IUC2 63 aa3.37□□□□□ -1.87
NELFCD-206ENST00000478389 USH2AO75445 5202 aa3.37□□□□□ -1.87
NELFCD-206ENST00000478389 KRTAP10-10P60014 251 aa3.36□□□□□ -1.87
NELFCD-206ENST00000478389 KRTAP9-4Q9BYQ2 154 aa3.36□□□□□ -1.87
NELFCD-206ENST00000478389 LCE1EQ5T753 118 aa3.33□□□□□ -1.88
NELFCD-206ENST00000478389 LCE3CQ5T5A8 94 aa3.32□□□□□ -1.88
NELFCD-206ENST00000478389 SPRR2GQ9BYE4 73 aa3.31□□□□□ -1.88
NELFCD-206ENST00000478389 KRTAP12-3P60328 96 aa3.28□□□□□ -1.88
NELFCD-206ENST00000478389 LCE1AQ5T7P2 110 aa3.26□□□□□ -1.89
NELFCD-206ENST00000478389 KRTAP10-12P60413 245 aa3.24□□□□□ -1.89
NELFCD-206ENST00000478389 KRTAP9-2Q9BYQ4 174 aa3.23□□□□□ -1.89
NELFCD-206ENST00000478389 MT2AP02795 61 aa3.23□□□□□ -1.89
NELFCD-206ENST00000478389 KRTAP19-1Q8IUB9 90 aa3.22□□□□□ -1.89
NELFCD-206ENST00000478389 KRTAP9-8Q9BYQ0 159 aa3.22□□□□□ -1.89
NELFCD-206ENST00000478389 MT1FP04733 61 aa3.21□□□□□ -1.9
NELFCD-206ENST00000478389 LCE4AQ5TA78 99 aa3.2□□□□□ -1.9
NELFCD-206ENST00000478389 KRTAP9-9Q9BYP9 154 aa3.17□□□□□ -1.9
NELFCD-206ENST00000478389 KRTAP10-5P60370 271 aa3.14□□□□□ -1.91
NELFCD-206ENST00000478389 LCE1DQ5T752 114 aa3.13□□□□□ -1.91
NELFCD-206ENST00000478389 LCE3EQ5T5B0 92 aa3.11□□□□□ -1.91
NELFCD-206ENST00000478389 KRTAP9-6A0A140TA67 174 aa3.11□□□□□ -1.91
NELFCD-206ENST00000478389 KRTAP9-3Q9BYQ3 159 aa3.11□□□□□ -1.91
NELFCD-206ENST00000478389 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.1□□□□□ -1.91
NELFCD-206ENST00000478389 KRTAP4-8Q9BYQ9 185 aa3.1□□□□□ -1.91
NELFCD-206ENST00000478389 CRCT1Q9UGL9 99 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms