RNA–Protein interactions for RNA: ENST00000477639.5

TMED4-204, Transcript of transmembrane p24 trafficking protein 4, humanhuman

TSL 2

Gene TMED4, Length 1,950 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED4-204ENST00000477639 MIR22HGQ0VDD5 57 aa10.99□□□□□ -0.65
TMED4-204ENST00000477639 DMBT1Q9UGM3 2413 aaPredicted RBP10.99□□□□□ -0.65
TMED4-204ENST00000477639 FAT3Q8TDW7 4589 aa10.98□□□□□ -0.65
TMED4-204ENST00000477639 TNXBP22105 4242 aa10.96□□□□□ -0.66
TMED4-204ENST00000477639 HERC1Q15751 4861 aa10.95□□□□□ -0.66
TMED4-204ENST00000477639 SEC61GP60059 68 aa10.9□□□□□ -0.66
TMED4-204ENST00000477639 COX6B2Q6YFQ2 88 aa10.85□□□□□ -0.67
TMED4-204ENST00000477639 MT1HL1P0DM35 61 aa10.81□□□□□ -0.68
TMED4-204ENST00000477639 RPL37P61927 97 aaKnown RBP10.77□□□□□ -0.69
TMED4-204ENST00000477639 RBM12B-AS1Q9P1G2 102 aa10.74□□□□□ -0.69
TMED4-204ENST00000477639 XP32Q5T750 250 aa10.72□□□□□ -0.69
TMED4-204ENST00000477639 H0YAA0 97 aa10.7□□□□□ -0.7
TMED4-204ENST00000477639 A0A1B0GU33 70 aa10.68□□□□□ -0.7
TMED4-204ENST00000477639 H1FX-AS1Q4G0G2 97 aa10.66□□□□□ -0.7
TMED4-204ENST00000477639 ADM2Q7Z4H4 148 aa10.63□□□□□ -0.71
TMED4-204ENST00000477639 PRAC1Q96KF2 57 aa10.62□□□□□ -0.71
TMED4-204ENST00000477639 KRTAP3-3Q9BYR6 98 aa10.59□□□□□ -0.71
TMED4-204ENST00000477639 HMCN2Q8NDA2 5059 aa10.58□□□□□ -0.72
TMED4-204ENST00000477639 S4R3F8 94 aa10.46□□□□□ -0.74
TMED4-204ENST00000477639 KRTAP10-6P60371 365 aaPredicted RBP10.45□□□□□ -0.74
TMED4-204ENST00000477639 KRTAP3-2Q9BYR7 98 aa10.41□□□□□ -0.74
TMED4-204ENST00000477639 TPRXLQ17RH7 258 aa10.37□□□□□ -0.75
TMED4-204ENST00000477639 LRP2P98164 4655 aa10.34□□□□□ -0.75
TMED4-204ENST00000477639 CSAG1Q6PB30 78 aa10.34□□□□□ -0.75
TMED4-204ENST00000477639 UBR4Q5T4S7 5183 aa10.33□□□□□ -0.76
TMED4-204ENST00000477639 KRTAP13-4Q3LI77 160 aa10.3□□□□□ -0.76
TMED4-204ENST00000477639 LPAP08519 4548 aa10.28□□□□□ -0.76
TMED4-204ENST00000477639 K7ERS5 55 aa10.26□□□□□ -0.77
TMED4-204ENST00000477639 P0C880 135 aa10.23□□□□□ -0.77
TMED4-204ENST00000477639 LINC01554Q52M75 96 aa10.22□□□□□ -0.77
TMED4-204ENST00000477639 A0A0D9SG42 100 aa10.14□□□□□ -0.79
TMED4-204ENST00000477639 KRTAP25-1Q3LHN0 102 aa10.11□□□□□ -0.79
TMED4-204ENST00000477639 RNF213Q63HN8 5207 aa10.08□□□□□ -0.8
TMED4-204ENST00000477639 ROMO1P60602 79 aa10.05□□□□□ -0.8
TMED4-204ENST00000477639 SEC61BP60468 96 aaKnown RBP9.97□□□□□ -0.81
TMED4-204ENST00000477639 CRIPTQ9P021 101 aa9.95□□□□□ -0.82
TMED4-204ENST00000477639 KRTAP12-2P59991 146 aa9.94□□□□□ -0.82
TMED4-204ENST00000477639 M0QZ58 72 aa9.92□□□□□ -0.82
TMED4-204ENST00000477639 KRTAP12-1P59990 96 aa9.9□□□□□ -0.82
TMED4-204ENST00000477639 MUC17Q685J3 4493 aa9.88□□□□□ -0.83
TMED4-204ENST00000477639 KRTAP4-1Q9BYQ7 146 aa9.88□□□□□ -0.83
TMED4-204ENST00000477639 MUC2Q02817 5179 aa9.86□□□□□ -0.83
TMED4-204ENST00000477639 SPINT4Q6UDR6 99 aa9.82□□□□□ -0.84
TMED4-204ENST00000477639 KRTAP19-2Q3LHN2 52 aa9.74□□□□□ -0.85
TMED4-204ENST00000477639 R4GN34 69 aa9.66□□□□□ -0.86
TMED4-204ENST00000477639 C10orf95Q9H7T3 257 aa9.65□□□□□ -0.86
TMED4-204ENST00000477639 LORP23490 312 aaPredicted RBP9.63□□□□□ -0.87
TMED4-204ENST00000477639 FAT4Q6V0I7 4981 aa9.55□□□□□ -0.88
TMED4-204ENST00000477639 FLGP20930 4061 aaPredicted RBP9.41□□□□□ -0.9
TMED4-204ENST00000477639 LCE2AQ5TA79 106 aaPredicted RBP9.39□□□□□ -0.91
TMED4-204ENST00000477639 LCE2CQ5TA81 110 aa9.28□□□□□ -0.92
TMED4-204ENST00000477639 KRTAP15-1Q3LI76 137 aa9.21□□□□□ -0.94
TMED4-204ENST00000477639 MT1HP80294 61 aa9.18□□□□□ -0.94
TMED4-204ENST00000477639 CAMK2N1Q7Z7J9 78 aa9.15□□□□□ -0.95
TMED4-204ENST00000477639 M0R2T5 61 aa9.08□□□□□ -0.96
TMED4-204ENST00000477639 H3BS24 57 aa9.04□□□□□ -0.96
TMED4-204ENST00000477639 KRTAP9-2Q9BYQ4 174 aa9.01□□□□□ -0.97
TMED4-204ENST00000477639 PP632Q6XCG6 107 aa8.95□□□□□ -0.98
TMED4-204ENST00000477639 SPRR2GQ9BYE4 73 aa8.92□□□□□ -0.98
TMED4-204ENST00000477639 KRTAP19-1Q8IUB9 90 aa8.88□□□□□ -0.99
TMED4-204ENST00000477639 PLAC4Q8WY50 150 aa8.86□□□□□ -0.99
TMED4-204ENST00000477639 NDUFAF8A1L188 74 aa8.83□□□□□ -1
TMED4-204ENST00000477639 TNP1P09430 55 aa8.82□□□□□ -1
TMED4-204ENST00000477639 LCE2DQ5TA82 110 aaPredicted RBP8.81□□□□□ -1
TMED4-204ENST00000477639 KRTAP23-1A1A580 65 aa8.76□□□□□ -1.01
TMED4-204ENST00000477639 MT2AP02795 61 aa8.75□□□□□ -1.01
TMED4-204ENST00000477639 MT1FP04733 61 aa8.73□□□□□ -1.01
TMED4-204ENST00000477639 KRTAP9-8Q9BYQ0 159 aa8.71□□□□□ -1.02
TMED4-204ENST00000477639 KRTAP10-10P60014 251 aa8.68□□□□□ -1.02
TMED4-204ENST00000477639 FSIP2Q5CZC0 6907 aa8.68□□□□□ -1.02
TMED4-204ENST00000477639 KRTAP9-6A0A140TA67 174 aa8.62□□□□□ -1.03
TMED4-204ENST00000477639 KRTAP19-8Q3LI54 63 aa8.57□□□□□ -1.04
TMED4-204ENST00000477639 CRCT1Q9UGL9 99 aa8.54□□□□□ -1.04
TMED4-204ENST00000477639 MT1BP07438 61 aa8.44□□□□□ -1.06
TMED4-204ENST00000477639 KRTAP9-3Q9BYQ3 159 aa8.41□□□□□ -1.06
TMED4-204ENST00000477639 LCE3AQ5TA76 89 aa8.39□□□□□ -1.07
TMED4-204ENST00000477639 USH2AO75445 5202 aa8.39□□□□□ -1.07
TMED4-204ENST00000477639 LCE2BO14633 110 aa8.35□□□□□ -1.07
TMED4-204ENST00000477639 KRTAP10-5P60370 271 aa8.35□□□□□ -1.07
TMED4-204ENST00000477639 LUZP6Q538Z0 58 aa8.35□□□□□ -1.07
TMED4-204ENST00000477639 SPRR5A0A1B0GTR4 108 aa8.34□□□□□ -1.07
TMED4-204ENST00000477639 MT1XP80297 61 aa8.33□□□□□ -1.08
TMED4-204ENST00000477639 SSPOA2VEC9 5147 aa8.27□□□□□ -1.09
TMED4-204ENST00000477639 KRTAP8-1Q8IUC2 63 aa8.22□□□□□ -1.09
TMED4-204ENST00000477639 KRTAP10-12P60413 245 aa8.1□□□□□ -1.11
TMED4-204ENST00000477639 KRTAP10-7P60409 375 aaPredicted RBP8.08□□□□□ -1.12
TMED4-204ENST00000477639 FCGBPQ9Y6R7 5405 aaPredicted RBP8.04□□□□□ -1.12
TMED4-204ENST00000477639 PRO2289Q9P1D8 64 aa8.02□□□□□ -1.13
TMED4-204ENST00000477639 KRTAP12-3P60328 96 aa8□□□□□ -1.13
TMED4-204ENST00000477639 KRTAP19-6Q3LI70 58 aa7.99□□□□□ -1.13
TMED4-204ENST00000477639 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.94□□□□□ -1.14
TMED4-204ENST00000477639 A0A0A0MQY5 61 aa7.82□□□□□ -1.16
TMED4-204ENST00000477639 KRTAP9-7A8MTY7 169 aa7.79□□□□□ -1.16
TMED4-204ENST00000477639 MACF1Q9UPN3 7388 aaKnown RBP7.79□□□□□ -1.16
TMED4-204ENST00000477639 KRTAP19-5Q3LI72 72 aa7.72□□□□□ -1.17
TMED4-204ENST00000477639 SYNE2Q8WXH0 6885 aaKnown RBP7.7□□□□□ -1.18
TMED4-204ENST00000477639 KRTAP4-8A0A0G2JLE6 195 aa7.59□□□□□ -1.2
TMED4-204ENST00000477639 KRTAP4-8Q9BYQ9 185 aa7.59□□□□□ -1.2
TMED4-204ENST00000477639 LCE3CQ5T5A8 94 aa7.54□□□□□ -1.2
TMED4-204ENST00000477639 KMT2DO14686 5537 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms