RNA–Protein interactions for RNA: ENST00000474839.5

SKIV2L-208, Transcript of Ski2 like RNA helicase, humanhuman

TSL 2

Gene SKIV2L, Length 3,378 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKIV2L-208ENST00000474839 MYCBP2O75592 4640 aa6.51□□□□□ -1.37
SKIV2L-208ENST00000474839 LRP1Q07954 4544 aaKnown RBP6.51□□□□□ -1.37
SKIV2L-208ENST00000474839 SPINT4Q6UDR6 99 aa6.5□□□□□ -1.37
SKIV2L-208ENST00000474839 KRTAP3-1Q9BYR8 98 aa6.5□□□□□ -1.37
SKIV2L-208ENST00000474839 K7ERS5 55 aa6.49□□□□□ -1.37
SKIV2L-208ENST00000474839 H1FX-AS1Q4G0G2 97 aa6.49□□□□□ -1.37
SKIV2L-208ENST00000474839 LUZP6Q538Z0 58 aa6.45□□□□□ -1.38
SKIV2L-208ENST00000474839 COX6B2Q6YFQ2 88 aa6.42□□□□□ -1.38
SKIV2L-208ENST00000474839 A0A1B0GVY2 172 aa6.41□□□□□ -1.38
SKIV2L-208ENST00000474839 HSPG2P98160 4391 aa6.39□□□□□ -1.39
SKIV2L-208ENST00000474839 FAT3Q8TDW7 4589 aa6.38□□□□□ -1.39
SKIV2L-208ENST00000474839 RYR1P21817 5038 aa6.38□□□□□ -1.39
SKIV2L-208ENST00000474839 KRTAP17-1Q9BYP8 105 aa6.32□□□□□ -1.4
SKIV2L-208ENST00000474839 RPS29P62273 56 aaKnown RBP6.31□□□□□ -1.4
SKIV2L-208ENST00000474839 Q5VSD8 79 aa6.3□□□□□ -1.4
SKIV2L-208ENST00000474839 C10orf95Q9H7T3 257 aa6.29□□□□□ -1.4
SKIV2L-208ENST00000474839 RPL37P61927 97 aaKnown RBP6.28□□□□□ -1.4
SKIV2L-208ENST00000474839 SEC61BP60468 96 aaKnown RBP6.26□□□□□ -1.41
SKIV2L-208ENST00000474839 KRTAP13-4Q3LI77 160 aa6.26□□□□□ -1.41
SKIV2L-208ENST00000474839 PKHD1L1Q86WI1 4243 aa6.22□□□□□ -1.41
SKIV2L-208ENST00000474839 KRTAP10-8P60410 259 aa6.22□□□□□ -1.41
SKIV2L-208ENST00000474839 KRTAP4-5Q9BYR2 181 aa6.22□□□□□ -1.41
SKIV2L-208ENST00000474839 S4R3F8 94 aa6.22□□□□□ -1.41
SKIV2L-208ENST00000474839 KRTAP15-1Q3LI76 137 aa6.21□□□□□ -1.41
SKIV2L-208ENST00000474839 KRTAP10-6P60371 365 aaPredicted RBP6.19□□□□□ -1.42
SKIV2L-208ENST00000474839 ABCA13Q86UQ4 5058 aa6.19□□□□□ -1.42
SKIV2L-208ENST00000474839 KRTAP10-4P60372 401 aaPredicted RBP6.18□□□□□ -1.42
SKIV2L-208ENST00000474839 HERC2O95714 4834 aa6.17□□□□□ -1.42
SKIV2L-208ENST00000474839 KRTAP3-3Q9BYR6 98 aa6.17□□□□□ -1.42
SKIV2L-208ENST00000474839 TPRXLQ17RH7 258 aa6.15□□□□□ -1.42
SKIV2L-208ENST00000474839 J3QL48 77 aa6.12□□□□□ -1.43
SKIV2L-208ENST00000474839 XP32Q5T750 250 aa6.11□□□□□ -1.43
SKIV2L-208ENST00000474839 KRTAP3-2Q9BYR7 98 aa6.1□□□□□ -1.43
SKIV2L-208ENST00000474839 KRTAP12-2P59991 146 aa6.09□□□□□ -1.43
SKIV2L-208ENST00000474839 LPAP08519 4548 aa6.08□□□□□ -1.44
SKIV2L-208ENST00000474839 TNXBP22105 4242 aa6.08□□□□□ -1.44
SKIV2L-208ENST00000474839 HERC1Q15751 4861 aa6.08□□□□□ -1.44
SKIV2L-208ENST00000474839 LRP2P98164 4655 aa6.05□□□□□ -1.44
SKIV2L-208ENST00000474839 PCLOQ9Y6V0 5065 aa6.05□□□□□ -1.44
SKIV2L-208ENST00000474839 BIRC6Q9NR09 4857 aa6.01□□□□□ -1.45
SKIV2L-208ENST00000474839 MUC2Q02817 5179 aa6□□□□□ -1.45
SKIV2L-208ENST00000474839 KRTAP12-1P59990 96 aa5.96□□□□□ -1.46
SKIV2L-208ENST00000474839 M0QZ58 72 aa5.94□□□□□ -1.46
SKIV2L-208ENST00000474839 MT1HL1P0DM35 61 aa5.93□□□□□ -1.46
SKIV2L-208ENST00000474839 R4GN34 69 aa5.9□□□□□ -1.46
SKIV2L-208ENST00000474839 RNF213Q63HN8 5207 aa5.84□□□□□ -1.47
SKIV2L-208ENST00000474839 UBR4Q5T4S7 5183 aa5.79□□□□□ -1.48
SKIV2L-208ENST00000474839 LORP23490 312 aaPredicted RBP5.74□□□□□ -1.49
SKIV2L-208ENST00000474839 FAT4Q6V0I7 4981 aa5.71□□□□□ -1.5
SKIV2L-208ENST00000474839 CAMK2N1Q7Z7J9 78 aa5.71□□□□□ -1.5
SKIV2L-208ENST00000474839 PLAC4Q8WY50 150 aa5.66□□□□□ -1.5
SKIV2L-208ENST00000474839 HMCN2Q8NDA2 5059 aa5.64□□□□□ -1.51
SKIV2L-208ENST00000474839 KRTAP4-1Q9BYQ7 146 aa5.54□□□□□ -1.52
SKIV2L-208ENST00000474839 MUC17Q685J3 4493 aa5.43□□□□□ -1.54
SKIV2L-208ENST00000474839 PRO2289Q9P1D8 64 aa5.4□□□□□ -1.54
SKIV2L-208ENST00000474839 TNP1P09430 55 aa5.34□□□□□ -1.55
SKIV2L-208ENST00000474839 PP632Q6XCG6 107 aa5.34□□□□□ -1.55
SKIV2L-208ENST00000474839 M0R2T5 61 aa5.29□□□□□ -1.56
SKIV2L-208ENST00000474839 KRTAP19-2Q3LHN2 52 aa5.21□□□□□ -1.57
SKIV2L-208ENST00000474839 FSIP2Q5CZC0 6907 aa5.21□□□□□ -1.58
SKIV2L-208ENST00000474839 FLGP20930 4061 aaPredicted RBP5.19□□□□□ -1.58
SKIV2L-208ENST00000474839 USH2AO75445 5202 aa5.1□□□□□ -1.59
SKIV2L-208ENST00000474839 LCE2CQ5TA81 110 aa5.07□□□□□ -1.6
SKIV2L-208ENST00000474839 KRTAP10-10P60014 251 aa5.06□□□□□ -1.6
SKIV2L-208ENST00000474839 LCE3AQ5TA76 89 aa5.05□□□□□ -1.6
SKIV2L-208ENST00000474839 INE1O15225 51 aa5.04□□□□□ -1.6
SKIV2L-208ENST00000474839 MT1HP80294 61 aa5.02□□□□□ -1.61
SKIV2L-208ENST00000474839 KRTAP19-1Q8IUB9 90 aa4.97□□□□□ -1.61
SKIV2L-208ENST00000474839 SPRR2GQ9BYE4 73 aa4.91□□□□□ -1.62
SKIV2L-208ENST00000474839 KRTAP23-1A1A580 65 aa4.9□□□□□ -1.62
SKIV2L-208ENST00000474839 SPRR5A0A1B0GTR4 108 aa4.9□□□□□ -1.63
SKIV2L-208ENST00000474839 MT1FP04733 61 aa4.88□□□□□ -1.63
SKIV2L-208ENST00000474839 MT2AP02795 61 aa4.84□□□□□ -1.63
SKIV2L-208ENST00000474839 KRTAP9-8Q9BYQ0 159 aa4.81□□□□□ -1.64
SKIV2L-208ENST00000474839 KRTAP12-3P60328 96 aa4.77□□□□□ -1.65
SKIV2L-208ENST00000474839 KRTAP10-12P60413 245 aa4.76□□□□□ -1.65
SKIV2L-208ENST00000474839 KMT2DO14686 5537 aa4.74□□□□□ -1.65
SKIV2L-208ENST00000474839 KRTAP10-5P60370 271 aa4.71□□□□□ -1.66
SKIV2L-208ENST00000474839 KRTAP10-7P60409 375 aaPredicted RBP4.71□□□□□ -1.66
SKIV2L-208ENST00000474839 KRTAP8-1Q8IUC2 63 aa4.71□□□□□ -1.66
SKIV2L-208ENST00000474839 MT1XP80297 61 aa4.7□□□□□ -1.66
SKIV2L-208ENST00000474839 MT1BP07438 61 aa4.68□□□□□ -1.66
SKIV2L-208ENST00000474839 LCE2AQ5TA79 106 aaPredicted RBP4.68□□□□□ -1.66
SKIV2L-208ENST00000474839 KRTAP19-8Q3LI54 63 aa4.61□□□□□ -1.67
SKIV2L-208ENST00000474839 KRTAP9-3Q9BYQ3 159 aa4.6□□□□□ -1.67
SKIV2L-208ENST00000474839 LCE2BO14633 110 aa4.59□□□□□ -1.68
SKIV2L-208ENST00000474839 SSPOA2VEC9 5147 aa4.58□□□□□ -1.68
SKIV2L-208ENST00000474839 KRTAP19-5Q3LI72 72 aa4.54□□□□□ -1.68
SKIV2L-208ENST00000474839 KRTAP4-8A0A0G2JLE6 195 aa4.49□□□□□ -1.69
SKIV2L-208ENST00000474839 KRTAP4-8Q9BYQ9 185 aa4.49□□□□□ -1.69
SKIV2L-208ENST00000474839 LCE3CQ5T5A8 94 aa4.43□□□□□ -1.7
SKIV2L-208ENST00000474839 KRTAP4-7Q9BYR0 210 aa4.41□□□□□ -1.7
SKIV2L-208ENST00000474839 SYNE2Q8WXH0 6885 aaKnown RBP4.37□□□□□ -1.71
SKIV2L-208ENST00000474839 FCGBPQ9Y6R7 5405 aaPredicted RBP4.35□□□□□ -1.71
SKIV2L-208ENST00000474839 MACF1Q9UPN3 7388 aaKnown RBP4.33□□□□□ -1.72
SKIV2L-208ENST00000474839 KRTAP9-6A8MVA2 160 aa4.33□□□□□ -1.72
SKIV2L-208ENST00000474839 MUC12Q9UKN1 5478 aa4.31□□□□□ -1.72
SKIV2L-208ENST00000474839 DSTQ03001 7570 aaKnown RBP4.3□□□□□ -1.72
SKIV2L-208ENST00000474839 KRTAP9-2Q9BYQ4 174 aa4.23□□□□□ -1.73
SKIV2L-208ENST00000474839 CRCT1Q9UGL9 99 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 162.5 ms