RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 SEC61BP60468 96 aaKnown RBP11.14□□□□□ -0.63
CCM2-206ENST00000474617 LCA10Q71F78 164 aa11.14□□□□□ -0.63
CCM2-206ENST00000474617 RBM12B-AS1Q9P1G2 102 aa11.09□□□□□ -0.63
CCM2-206ENST00000474617 H1FX-AS1Q4G0G2 97 aa11.06□□□□□ -0.64
CCM2-206ENST00000474617 SPATA8Q6RVD6 105 aa11.05□□□□□ -0.64
CCM2-206ENST00000474617 S4R3F8 94 aa11.05□□□□□ -0.64
CCM2-206ENST00000474617 ABCA13Q86UQ4 5058 aa11.05□□□□□ -0.64
CCM2-206ENST00000474617 MIR22HGQ0VDD5 57 aa11□□□□□ -0.65
CCM2-206ENST00000474617 A8MU10 97 aa10.94□□□□□ -0.66
CCM2-206ENST00000474617 KRTAP3-3Q9BYR6 98 aa10.94□□□□□ -0.66
CCM2-206ENST00000474617 LRP2P98164 4655 aa10.92□□□□□ -0.66
CCM2-206ENST00000474617 PMAIP1Q13794 54 aa10.91□□□□□ -0.66
CCM2-206ENST00000474617 A0A1B0GU33 70 aa10.9□□□□□ -0.66
CCM2-206ENST00000474617 PCLOQ9Y6V0 5065 aa10.8□□□□□ -0.68
CCM2-206ENST00000474617 CSAG1Q6PB30 78 aa10.8□□□□□ -0.68
CCM2-206ENST00000474617 LPAP08519 4548 aa10.8□□□□□ -0.68
CCM2-206ENST00000474617 A6NN06 94 aa10.78□□□□□ -0.68
CCM2-206ENST00000474617 H0YAA0 97 aa10.71□□□□□ -0.69
CCM2-206ENST00000474617 MUC17Q685J3 4493 aa10.7□□□□□ -0.7
CCM2-206ENST00000474617 KRTAP10-6P60371 365 aaPredicted RBP10.69□□□□□ -0.7
CCM2-206ENST00000474617 KRTAP3-2Q9BYR7 98 aa10.66□□□□□ -0.7
CCM2-206ENST00000474617 KTN1-AS1Q86SY8 53 aa10.63□□□□□ -0.71
CCM2-206ENST00000474617 KRTAP4-1Q9BYQ7 146 aa10.59□□□□□ -0.71
CCM2-206ENST00000474617 K7ERS5 55 aa10.58□□□□□ -0.72
CCM2-206ENST00000474617 ADM2Q7Z4H4 148 aa10.56□□□□□ -0.72
CCM2-206ENST00000474617 P0C880 135 aa10.49□□□□□ -0.73
CCM2-206ENST00000474617 M0QZ58 72 aa10.48□□□□□ -0.73
CCM2-206ENST00000474617 KRTAP19-2Q3LHN2 52 aa10.47□□□□□ -0.73
CCM2-206ENST00000474617 HMCN2Q8NDA2 5059 aa10.41□□□□□ -0.74
CCM2-206ENST00000474617 HERC1Q15751 4861 aa10.41□□□□□ -0.74
CCM2-206ENST00000474617 KRTAP13-4Q3LI77 160 aa10.38□□□□□ -0.75
CCM2-206ENST00000474617 FLGP20930 4061 aaPredicted RBP10.26□□□□□ -0.77
CCM2-206ENST00000474617 A0A0D9SG42 100 aa10.25□□□□□ -0.77
CCM2-206ENST00000474617 R4GN34 69 aa10.22□□□□□ -0.77
CCM2-206ENST00000474617 CRIPTQ9P021 101 aa10.12□□□□□ -0.79
CCM2-206ENST00000474617 KRTAP12-1P59990 96 aa10.1□□□□□ -0.79
CCM2-206ENST00000474617 ROMO1P60602 79 aa10.1□□□□□ -0.79
CCM2-206ENST00000474617 KRTAP12-2P59991 146 aa10.05□□□□□ -0.8
CCM2-206ENST00000474617 LCE2CQ5TA81 110 aa10.05□□□□□ -0.8
CCM2-206ENST00000474617 SPINT4Q6UDR6 99 aa10.03□□□□□ -0.8
CCM2-206ENST00000474617 MUC2Q02817 5179 aa10.02□□□□□ -0.8
CCM2-206ENST00000474617 PRAC1Q96KF2 57 aa10.02□□□□□ -0.81
CCM2-206ENST00000474617 LINC01554Q52M75 96 aa9.92□□□□□ -0.82
CCM2-206ENST00000474617 LORP23490 312 aaPredicted RBP9.92□□□□□ -0.82
CCM2-206ENST00000474617 KRTAP25-1Q3LHN0 102 aa9.86□□□□□ -0.83
CCM2-206ENST00000474617 RNF213Q63HN8 5207 aa9.86□□□□□ -0.83
CCM2-206ENST00000474617 UBR4Q5T4S7 5183 aa9.84□□□□□ -0.83
CCM2-206ENST00000474617 MT1HP80294 61 aa9.84□□□□□ -0.83
CCM2-206ENST00000474617 M0R2T5 61 aa9.83□□□□□ -0.84
CCM2-206ENST00000474617 SPRR2GQ9BYE4 73 aa9.67□□□□□ -0.86
CCM2-206ENST00000474617 CAMK2N1Q7Z7J9 78 aa9.62□□□□□ -0.87
CCM2-206ENST00000474617 FAT4Q6V0I7 4981 aa9.58□□□□□ -0.88
CCM2-206ENST00000474617 MT2AP02795 61 aa9.55□□□□□ -0.88
CCM2-206ENST00000474617 KRTAP9-8Q9BYQ0 159 aa9.54□□□□□ -0.88
CCM2-206ENST00000474617 KRTAP10-10P60014 251 aa9.52□□□□□ -0.88
CCM2-206ENST00000474617 KRTAP19-1Q8IUB9 90 aa9.5□□□□□ -0.89
CCM2-206ENST00000474617 C10orf95Q9H7T3 257 aa9.5□□□□□ -0.89
CCM2-206ENST00000474617 PLAC4Q8WY50 150 aa9.48□□□□□ -0.89
CCM2-206ENST00000474617 MT1FP04733 61 aa9.47□□□□□ -0.89
CCM2-206ENST00000474617 KRTAP19-8Q3LI54 63 aa9.35□□□□□ -0.91
CCM2-206ENST00000474617 PP632Q6XCG6 107 aa9.34□□□□□ -0.91
CCM2-206ENST00000474617 TNP1P09430 55 aa9.27□□□□□ -0.93
CCM2-206ENST00000474617 KRTAP23-1A1A580 65 aa9.26□□□□□ -0.93
CCM2-206ENST00000474617 LCE2AQ5TA79 106 aaPredicted RBP9.21□□□□□ -0.93
CCM2-206ENST00000474617 KRTAP9-3Q9BYQ3 159 aa9.19□□□□□ -0.94
CCM2-206ENST00000474617 MT1BP07438 61 aa9.08□□□□□ -0.96
CCM2-206ENST00000474617 PRO2289Q9P1D8 64 aa8.95□□□□□ -0.98
CCM2-206ENST00000474617 KRTAP10-5P60370 271 aa8.9□□□□□ -0.99
CCM2-206ENST00000474617 MT1XP80297 61 aa8.89□□□□□ -0.99
CCM2-206ENST00000474617 LCE2BO14633 110 aa8.8□□□□□ -1
CCM2-206ENST00000474617 KRTAP15-1Q3LI76 137 aa8.8□□□□□ -1
CCM2-206ENST00000474617 LCE3AQ5TA76 89 aa8.65□□□□□ -1.02
CCM2-206ENST00000474617 KRTAP10-12P60413 245 aa8.64□□□□□ -1.03
CCM2-206ENST00000474617 KRTAP8-1Q8IUC2 63 aa8.63□□□□□ -1.03
CCM2-206ENST00000474617 KRTAP10-7P60409 375 aaPredicted RBP8.49□□□□□ -1.05
CCM2-206ENST00000474617 KRTAP9-2Q9BYQ4 174 aa8.47□□□□□ -1.05
CCM2-206ENST00000474617 LCE2DQ5TA82 110 aaPredicted RBP8.44□□□□□ -1.06
CCM2-206ENST00000474617 USH2AO75445 5202 aa8.41□□□□□ -1.06
CCM2-206ENST00000474617 KRTAP12-3P60328 96 aa8.38□□□□□ -1.07
CCM2-206ENST00000474617 SPRR5A0A1B0GTR4 108 aa8.34□□□□□ -1.08
CCM2-206ENST00000474617 LUZP6Q538Z0 58 aa8.33□□□□□ -1.08
CCM2-206ENST00000474617 KRTAP19-6Q3LI70 58 aa8.29□□□□□ -1.08
CCM2-206ENST00000474617 NDUFAF8A1L188 74 aa8.25□□□□□ -1.09
CCM2-206ENST00000474617 FSIP2Q5CZC0 6907 aa8.18□□□□□ -1.1
CCM2-206ENST00000474617 SSPOA2VEC9 5147 aa8.16□□□□□ -1.1
CCM2-206ENST00000474617 KRTAP9-6A0A140TA67 174 aa8.13□□□□□ -1.11
CCM2-206ENST00000474617 KRTAP19-5Q3LI72 72 aa8.11□□□□□ -1.11
CCM2-206ENST00000474617 KRTAP19-4Q3LI73 84 aa8.09□□□□□ -1.11
CCM2-206ENST00000474617 CRCT1Q9UGL9 99 aa8.03□□□□□ -1.12
CCM2-206ENST00000474617 KRTAP4-8A0A0G2JLE6 195 aa7.99□□□□□ -1.13
CCM2-206ENST00000474617 KRTAP4-8Q9BYQ9 185 aa7.99□□□□□ -1.13
CCM2-206ENST00000474617 KRTAP19-7Q3SYF9 63 aa7.93□□□□□ -1.14
CCM2-206ENST00000474617 H3BS24 57 aa7.89□□□□□ -1.15
CCM2-206ENST00000474617 LCE3CQ5T5A8 94 aa7.86□□□□□ -1.15
CCM2-206ENST00000474617 MT1EP04732 61 aa7.79□□□□□ -1.16
CCM2-206ENST00000474617 KMT2DO14686 5537 aa7.79□□□□□ -1.16
CCM2-206ENST00000474617 FCGBPQ9Y6R7 5405 aaPredicted RBP7.7□□□□□ -1.18
CCM2-206ENST00000474617 MT1LQ93083 61 aa7.69□□□□□ -1.18
CCM2-206ENST00000474617 A0A0A0MQY5 61 aa7.52□□□□□ -1.2
CCM2-206ENST00000474617 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms