RNA–Protein interactions for RNA: ENST00000471363.5

CACNA2D3-204, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 3, humanhuman

TSL 1 (best)

Gene CACNA2D3, Length 3,477 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D3-204ENST00000471363 UBR4Q5T4S7 5183 aa3.38□□□□□ -1.87
CACNA2D3-204ENST00000471363 LCE2CQ5TA81 110 aa3.37□□□□□ -1.87
CACNA2D3-204ENST00000471363 KRTAP15-1Q3LI76 137 aa3.37□□□□□ -1.87
CACNA2D3-204ENST00000471363 H1FX-AS1Q4G0G2 97 aa3.36□□□□□ -1.87
CACNA2D3-204ENST00000471363 KRTAP3-1Q9BYR8 98 aa3.35□□□□□ -1.87
CACNA2D3-204ENST00000471363 VPS13BQ7Z7G8 4022 aa3.35□□□□□ -1.87
CACNA2D3-204ENST00000471363 RYR2Q92736 4967 aa3.34□□□□□ -1.87
CACNA2D3-204ENST00000471363 HERC2O95714 4834 aa3.33□□□□□ -1.88
CACNA2D3-204ENST00000471363 RPS29P62273 56 aaKnown RBP3.33□□□□□ -1.88
CACNA2D3-204ENST00000471363 KRTAP23-1A1A580 65 aa3.31□□□□□ -1.88
CACNA2D3-204ENST00000471363 LCE2AQ5TA79 106 aaPredicted RBP3.3□□□□□ -1.88
CACNA2D3-204ENST00000471363 COX6B2Q6YFQ2 88 aa3.3□□□□□ -1.88
CACNA2D3-204ENST00000471363 PKD1P98161 4303 aa3.3□□□□□ -1.88
CACNA2D3-204ENST00000471363 SMR3BP02814 79 aaPredicted RBP3.29□□□□□ -1.88
CACNA2D3-204ENST00000471363 FAT2Q9NYQ8 4349 aa3.28□□□□□ -1.89
CACNA2D3-204ENST00000471363 CAMK2N1Q7Z7J9 78 aa3.25□□□□□ -1.89
CACNA2D3-204ENST00000471363 A0A0D9SG42 100 aa3.24□□□□□ -1.89
CACNA2D3-204ENST00000471363 DMBT1Q9UGM3 2413 aaPredicted RBP3.24□□□□□ -1.89
CACNA2D3-204ENST00000471363 RPL37P61927 97 aaKnown RBP3.24□□□□□ -1.89
CACNA2D3-204ENST00000471363 SACSQ9NZJ4 4579 aa3.23□□□□□ -1.89
CACNA2D3-204ENST00000471363 TPRXLQ17RH7 258 aa3.22□□□□□ -1.89
CACNA2D3-204ENST00000471363 PKHD1P08F94 4074 aa3.22□□□□□ -1.89
CACNA2D3-204ENST00000471363 KRTAP10-6P60371 365 aaPredicted RBP3.21□□□□□ -1.89
CACNA2D3-204ENST00000471363 KRTAP13-4Q3LI77 160 aa3.21□□□□□ -1.89
CACNA2D3-204ENST00000471363 C10orf95Q9H7T3 257 aa3.2□□□□□ -1.9
CACNA2D3-204ENST00000471363 PKHD1L1Q86WI1 4243 aa3.19□□□□□ -1.9
CACNA2D3-204ENST00000471363 KIAA1109Q2LD37 5005 aa3.19□□□□□ -1.9
CACNA2D3-204ENST00000471363 KRTAP10-4P60372 401 aaPredicted RBP3.18□□□□□ -1.9
CACNA2D3-204ENST00000471363 KRTAP9-6A0A140TA67 174 aa3.18□□□□□ -1.9
CACNA2D3-204ENST00000471363 S4R3F8 94 aa3.18□□□□□ -1.9
CACNA2D3-204ENST00000471363 FAT1Q14517 4588 aa3.18□□□□□ -1.9
CACNA2D3-204ENST00000471363 DYNC1H1Q14204 4646 aaKnown RBP3.16□□□□□ -1.9
CACNA2D3-204ENST00000471363 KRTAP10-8P60410 259 aa3.15□□□□□ -1.91
CACNA2D3-204ENST00000471363 APOBP04114 4563 aaKnown RBP3.14□□□□□ -1.91
CACNA2D3-204ENST00000471363 A0A1B0GVY2 172 aa3.13□□□□□ -1.91
CACNA2D3-204ENST00000471363 KRTAP12-2P59991 146 aa3.12□□□□□ -1.91
CACNA2D3-204ENST00000471363 ABCA13Q86UQ4 5058 aa3.12□□□□□ -1.91
CACNA2D3-204ENST00000471363 LORP23490 312 aaPredicted RBP3.12□□□□□ -1.91
CACNA2D3-204ENST00000471363 HERC1Q15751 4861 aa3.11□□□□□ -1.91
CACNA2D3-204ENST00000471363 XP32Q5T750 250 aa3.11□□□□□ -1.91
CACNA2D3-204ENST00000471363 KRTAP4-5Q9BYR2 181 aa3.09□□□□□ -1.91
CACNA2D3-204ENST00000471363 KRTAP9-2Q9BYQ4 174 aa3.09□□□□□ -1.91
CACNA2D3-204ENST00000471363 KRTAP12-1P59990 96 aa3.09□□□□□ -1.92
CACNA2D3-204ENST00000471363 FAT3Q8TDW7 4589 aa3.08□□□□□ -1.92
CACNA2D3-204ENST00000471363 HSPG2P98160 4391 aa3.07□□□□□ -1.92
CACNA2D3-204ENST00000471363 LRP1Q07954 4544 aaKnown RBP3.06□□□□□ -1.92
CACNA2D3-204ENST00000471363 R4GN34 69 aa3.05□□□□□ -1.92
CACNA2D3-204ENST00000471363 TNXBP22105 4242 aa3.04□□□□□ -1.92
CACNA2D3-204ENST00000471363 MYCBP2O75592 4640 aa3.04□□□□□ -1.92
CACNA2D3-204ENST00000471363 Q5VSD8 79 aa3.04□□□□□ -1.92
CACNA2D3-204ENST00000471363 M0QZ58 72 aa3.03□□□□□ -1.92
CACNA2D3-204ENST00000471363 PRO2289Q9P1D8 64 aa3.01□□□□□ -1.93
CACNA2D3-204ENST00000471363 PLAC4Q8WY50 150 aa3□□□□□ -1.93
CACNA2D3-204ENST00000471363 LPAP08519 4548 aa2.95□□□□□ -1.94
CACNA2D3-204ENST00000471363 MT1HL1P0DM35 61 aa2.95□□□□□ -1.94
CACNA2D3-204ENST00000471363 LRP2P98164 4655 aa2.92□□□□□ -1.94
CACNA2D3-204ENST00000471363 MUC2Q02817 5179 aa2.86□□□□□ -1.95
CACNA2D3-204ENST00000471363 CRCT1Q9UGL9 99 aa2.84□□□□□ -1.95
CACNA2D3-204ENST00000471363 RNF213Q63HN8 5207 aa2.82□□□□□ -1.96
CACNA2D3-204ENST00000471363 PP632Q6XCG6 107 aa2.82□□□□□ -1.96
CACNA2D3-204ENST00000471363 KRTAP9-7A8MTY7 169 aa2.8□□□□□ -1.96
CACNA2D3-204ENST00000471363 HMCN2Q8NDA2 5059 aa2.8□□□□□ -1.96
CACNA2D3-204ENST00000471363 KRTAP4-1Q9BYQ7 146 aa2.8□□□□□ -1.96
CACNA2D3-204ENST00000471363 INE1O15225 51 aa2.78□□□□□ -1.96
CACNA2D3-204ENST00000471363 FAT4Q6V0I7 4981 aa2.77□□□□□ -1.97
CACNA2D3-204ENST00000471363 MUC17Q685J3 4493 aa2.77□□□□□ -1.97
CACNA2D3-204ENST00000471363 FSIP2Q5CZC0 6907 aa2.75□□□□□ -1.97
CACNA2D3-204ENST00000471363 TNP1P09430 55 aa2.73□□□□□ -1.97
CACNA2D3-204ENST00000471363 KRTAP19-2Q3LHN2 52 aa2.73□□□□□ -1.97
CACNA2D3-204ENST00000471363 SPRR5A0A1B0GTR4 108 aa2.66□□□□□ -1.98
CACNA2D3-204ENST00000471363 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.65□□□□□ -1.99
CACNA2D3-204ENST00000471363 FLGP20930 4061 aaPredicted RBP2.63□□□□□ -1.99
CACNA2D3-204ENST00000471363 LCE3AQ5TA76 89 aa2.57□□□□□ -2
CACNA2D3-204ENST00000471363 SPRR2GQ9BYE4 73 aa2.56□□□□□ -2
CACNA2D3-204ENST00000471363 KRTAP19-1Q8IUB9 90 aa2.55□□□□□ -2
CACNA2D3-204ENST00000471363 M0R2T5 61 aa2.54□□□□□ -2
CACNA2D3-204ENST00000471363 KRTAP10-10P60014 251 aa2.49□□□□□ -2.01
CACNA2D3-204ENST00000471363 KRTAP8-1Q8IUC2 63 aa2.48□□□□□ -2.01
CACNA2D3-204ENST00000471363 MT1FP04733 61 aa2.47□□□□□ -2.01
CACNA2D3-204ENST00000471363 MT1HP80294 61 aa2.46□□□□□ -2.02
CACNA2D3-204ENST00000471363 MT2AP02795 61 aa2.46□□□□□ -2.02
CACNA2D3-204ENST00000471363 KRTAP12-3P60328 96 aa2.44□□□□□ -2.02
CACNA2D3-204ENST00000471363 SSPOA2VEC9 5147 aa2.43□□□□□ -2.02
CACNA2D3-204ENST00000471363 KRTAP10-12P60413 245 aa2.43□□□□□ -2.02
CACNA2D3-204ENST00000471363 NEBP20929 6669 aa2.43□□□□□ -2.02
CACNA2D3-204ENST00000471363 KRTAP19-8Q3LI54 63 aa2.43□□□□□ -2.02
CACNA2D3-204ENST00000471363 KRTAP20-1Q3LI63 56 aa2.43□□□□□ -2.02
CACNA2D3-204ENST00000471363 KRTAP10-5P60370 271 aa2.42□□□□□ -2.02
CACNA2D3-204ENST00000471363 MT1XP80297 61 aa2.42□□□□□ -2.02
CACNA2D3-204ENST00000471363 SYNE2Q8WXH0 6885 aaKnown RBP2.41□□□□□ -2.02
CACNA2D3-204ENST00000471363 KRTAP9-8Q9BYQ0 159 aa2.41□□□□□ -2.02
CACNA2D3-204ENST00000471363 GPR98Q8WXG9 6306 aa2.41□□□□□ -2.02
CACNA2D3-204ENST00000471363 MT1BP07438 61 aa2.4□□□□□ -2.02
CACNA2D3-204ENST00000471363 KRTAP10-7P60409 375 aaPredicted RBP2.38□□□□□ -2.03
CACNA2D3-204ENST00000471363 LCE5AQ5TCM9 118 aa2.36□□□□□ -2.03
CACNA2D3-204ENST00000471363 LCE4AQ5TA78 99 aa2.35□□□□□ -2.03
CACNA2D3-204ENST00000471363 KRTAP2-2Q9BYT5 123 aa2.35□□□□□ -2.03
CACNA2D3-204ENST00000471363 KRTAP9-4Q9BYQ2 154 aa2.33□□□□□ -2.04
CACNA2D3-204ENST00000471363 KRTAP19-4Q3LI73 84 aa2.31□□□□□ -2.04
CACNA2D3-204ENST00000471363 KRTAP9-3Q9BYQ3 159 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 212.8 ms