RNA–Protein interactions for RNA: ENST00000471363.5

CACNA2D3-204, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 3, humanhuman

TSL 1 (best)

Gene CACNA2D3, Length 3,477 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D3-204ENST00000471363 NISCHQ9Y2I1 1504 aa12.13□□□□□ -0.47
CACNA2D3-204ENST00000471363 SHROOM4Q9ULL8 1493 aa10.63□□□□□ -0.71
CACNA2D3-204ENST00000471363 SUPT5HO00267 1087 aaKnown RBP10.53□□□□□ -0.72
CACNA2D3-204ENST00000471363 HRCP23327 699 aa10.39□□□□□ -0.75
CACNA2D3-204ENST00000471363 MYO15BQ96JP2 1530 aa10.32□□□□□ -0.76
CACNA2D3-204ENST00000471363 ZCCHC6Q5VYS8 1495 aaKnown RBP10.3□□□□□ -0.76
CACNA2D3-204ENST00000471363 CHIC1Q5VXU3 224 aa10.3□□□□□ -0.76
CACNA2D3-204ENST00000471363 PCGF6Q9BYE7 350 aa10.26□□□□□ -0.77
CACNA2D3-204ENST00000471363 PELP1Q8IZL8 1130 aaKnown RBP10.23□□□□□ -0.77
CACNA2D3-204ENST00000471363 PPARGC1BQ86YN6 1023 aaKnown RBP10.18□□□□□ -0.78
CACNA2D3-204ENST00000471363 CCDC180Q9P1Z9 1646 aa10.17□□□□□ -0.78
CACNA2D3-204ENST00000471363 SLC24A1O60721 1099 aa10.17□□□□□ -0.78
CACNA2D3-204ENST00000471363 DCAF8L2P0C7V8 631 aa10.14□□□□□ -0.79
CACNA2D3-204ENST00000471363 MYT1Q01538 1121 aa10.13□□□□□ -0.79
CACNA2D3-204ENST00000471363 DCAF1Q9Y4B6 1507 aa10.08□□□□□ -0.8
CACNA2D3-204ENST00000471363 LOC105371045A0A1W2PR82 267 aa10.04□□□□□ -0.8
CACNA2D3-204ENST00000471363 TRIM26Q12899 539 aaPredicted RBP9.97□□□□□ -0.81
CACNA2D3-204ENST00000471363 ZEB1P37275 1124 aaPredicted RBP9.85□□□□□ -0.83
CACNA2D3-204ENST00000471363 PRKCSHP14314 528 aaPredicted RBP9.84□□□□□ -0.83
CACNA2D3-204ENST00000471363 TTBK1Q5TCY1 1321 aaPredicted RBP9.78□□□□□ -0.84
CACNA2D3-204ENST00000471363 ABCC9O60706 1549 aa9.77□□□□□ -0.85
CACNA2D3-204ENST00000471363 TRIM41Q8WV44 630 aa9.76□□□□□ -0.85
CACNA2D3-204ENST00000471363 FAM9AQ8IZU1 332 aaPredicted RBP9.75□□□□□ -0.85
CACNA2D3-204ENST00000471363 SCAF1Q9H7N4 1312 aaKnown RBP9.73□□□□□ -0.85
CACNA2D3-204ENST00000471363 EHMT2Q96KQ7 1210 aa9.7□□□□□ -0.86
CACNA2D3-204ENST00000471363 RSF1Q96T23 1441 aaPredicted RBP9.7□□□□□ -0.86
CACNA2D3-204ENST00000471363 RB1CC1Q8TDY2 1594 aa9.66□□□□□ -0.86
CACNA2D3-204ENST00000471363 SCRIBQ14160 1630 aa9.66□□□□□ -0.86
CACNA2D3-204ENST00000471363 ERICH6Q7L0X2 663 aa9.57□□□□□ -0.88
CACNA2D3-204ENST00000471363 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.57□□□□□ -0.88
CACNA2D3-204ENST00000471363 CCER1Q8TC90 406 aaPredicted RBP9.56□□□□□ -0.88
CACNA2D3-204ENST00000471363 ACIN1Q9UKV3 1341 aaKnown RBP9.55□□□□□ -0.88
CACNA2D3-204ENST00000471363 NEUROD1Q13562 356 aa9.53□□□□□ -0.88
CACNA2D3-204ENST00000471363 APLP2Q06481 763 aa9.51□□□□□ -0.89
CACNA2D3-204ENST00000471363 DIEXFQ68CQ4 756 aaKnown RBP9.49□□□□□ -0.89
CACNA2D3-204ENST00000471363 CENPBP07199 599 aaPredicted RBP9.48□□□□□ -0.89
CACNA2D3-204ENST00000471363 CECR2Q9BXF3 1484 aa9.48□□□□□ -0.89
CACNA2D3-204ENST00000471363 GTF3C3Q9Y5Q9 886 aa9.47□□□□□ -0.89
CACNA2D3-204ENST00000471363 DNAJC5BQ9UF47 199 aa9.47□□□□□ -0.89
CACNA2D3-204ENST00000471363 MROH2BQ7Z745 1585 aa9.46□□□□□ -0.89
CACNA2D3-204ENST00000471363 WIZO95785 1651 aa9.44□□□□□ -0.9
CACNA2D3-204ENST00000471363 DNAJC5Q9H3Z4 198 aa9.41□□□□□ -0.9
CACNA2D3-204ENST00000471363 BCL11AQ9H165 835 aa9.4□□□□□ -0.9
CACNA2D3-204ENST00000471363 BAZ1AQ9NRL2 1556 aaPredicted RBP9.37□□□□□ -0.91
CACNA2D3-204ENST00000471363 NACADO15069 1562 aa9.36□□□□□ -0.91
CACNA2D3-204ENST00000471363 WRNQ14191 1432 aaPredicted RBP eCLIP9.36□□□□□ -0.91
CACNA2D3-204ENST00000471363 EIF4G1Q04637 1599 aaKnown RBP9.36□□□□□ -0.91
CACNA2D3-204ENST00000471363 CEP162Q5TB80 1403 aa9.35□□□□□ -0.91
CACNA2D3-204ENST00000471363 ZNF316A6NFI3 1004 aaPredicted RBP9.34□□□□□ -0.91
CACNA2D3-204ENST00000471363 YTHDC1Q96MU7 727 aaKnown RBP9.33□□□□□ -0.92
CACNA2D3-204ENST00000471363 ABCC8Q09428 1581 aa9.33□□□□□ -0.92
CACNA2D3-204ENST00000471363 CCDC88BA6NC98 1476 aa9.32□□□□□ -0.92
CACNA2D3-204ENST00000471363 DAXXQ9UER7 740 aaPredicted RBP9.3□□□□□ -0.92
CACNA2D3-204ENST00000471363 TNIKQ9UKE5 1360 aa9.29□□□□□ -0.92
CACNA2D3-204ENST00000471363 UBTFP17480 764 aaKnown RBP9.29□□□□□ -0.92
CACNA2D3-204ENST00000471363 SOGA1O94964 1423 aa9.28□□□□□ -0.92
CACNA2D3-204ENST00000471363 TOP2AP11388 1531 aaKnown RBP9.26□□□□□ -0.93
CACNA2D3-204ENST00000471363 CSRNP3Q8WYN3 585 aa9.25□□□□□ -0.93
CACNA2D3-204ENST00000471363 MIER1Q8N108 512 aa9.25□□□□□ -0.93
CACNA2D3-204ENST00000471363 HNRNPUL2Q1KMD3 747 aaKnown RBP9.24□□□□□ -0.93
CACNA2D3-204ENST00000471363 EEA1Q15075 1411 aa9.23□□□□□ -0.93
CACNA2D3-204ENST00000471363 RUSC2Q8N2Y8 1516 aa9.23□□□□□ -0.93
CACNA2D3-204ENST00000471363 SMARCA2P51531 1590 aa9.23□□□□□ -0.93
CACNA2D3-204ENST00000471363 GOLGA3Q08378 1498 aa9.21□□□□□ -0.93
CACNA2D3-204ENST00000471363 SMARCA4P51532 1647 aa9.2□□□□□ -0.94
CACNA2D3-204ENST00000471363 PLPPR3Q6T4P5 718 aa9.18□□□□□ -0.94
CACNA2D3-204ENST00000471363 AEBP2Q6ZN18 517 aaPredicted RBP9.14□□□□□ -0.95
CACNA2D3-204ENST00000471363 CLIP1P30622 1438 aa9.13□□□□□ -0.95
CACNA2D3-204ENST00000471363 CEP164Q9UPV0 1460 aa9.13□□□□□ -0.95
CACNA2D3-204ENST00000471363 EIF5BO60841 1220 aaKnown RBP9.12□□□□□ -0.95
CACNA2D3-204ENST00000471363 VPS8Q8N3P4 1428 aa9.11□□□□□ -0.95
CACNA2D3-204ENST00000471363 RANGAP1P46060 587 aaPredicted RBP9.1□□□□□ -0.95
CACNA2D3-204ENST00000471363 KIF21BO75037 1637 aa9.1□□□□□ -0.95
CACNA2D3-204ENST00000471363 SYNJ1O43426 1573 aa9.07□□□□□ -0.96
CACNA2D3-204ENST00000471363 RTN4Q9NQC3 1192 aaKnown RBP9.06□□□□□ -0.96
CACNA2D3-204ENST00000471363 UNC13AQ9UPW8 1703 aa9.06□□□□□ -0.96
CACNA2D3-204ENST00000471363 CLSPNQ9HAW4 1339 aa9.05□□□□□ -0.96
CACNA2D3-204ENST00000471363 SUPT16HQ9Y5B9 1047 aaKnown RBP9.05□□□□□ -0.96
CACNA2D3-204ENST00000471363 BAZ1BQ9UIG0 1483 aaKnown RBP9.04□□□□□ -0.96
CACNA2D3-204ENST00000471363 RAPGEF2Q9Y4G8 1499 aa9.04□□□□□ -0.96
CACNA2D3-204ENST00000471363 DHX57Q6P158 1386 aaKnown RBP9.03□□□□□ -0.96
CACNA2D3-204ENST00000471363 PLEKHG5O94827 1062 aa9.01□□□□□ -0.97
CACNA2D3-204ENST00000471363 NCBP3Q53F19 620 aaKnown RBP9□□□□□ -0.97
CACNA2D3-204ENST00000471363 PABPN1Q86U42 306 aaKnown RBP eCLIP9□□□□□ -0.97
CACNA2D3-204ENST00000471363 TSHZ2Q9NRE2 1034 aa8.97□□□□□ -0.97
CACNA2D3-204ENST00000471363 PEG3Q9GZU2 1588 aa8.96□□□□□ -0.98
CACNA2D3-204ENST00000471363 KANK4Q5T7N3 995 aaPredicted RBP8.95□□□□□ -0.98
CACNA2D3-204ENST00000471363 ARAP1Q96P48 1450 aa8.94□□□□□ -0.98
CACNA2D3-204ENST00000471363 ITGAEP38570 1179 aa8.92□□□□□ -0.98
CACNA2D3-204ENST00000471363 BICRAQ9NZM4 1560 aa8.92□□□□□ -0.98
CACNA2D3-204ENST00000471363 ANP32EQ9BTT0 268 aa8.92□□□□□ -0.98
CACNA2D3-204ENST00000471363 TOP2BQ02880 1626 aa8.91□□□□□ -0.98
CACNA2D3-204ENST00000471363 RRBP1Q9P2E9 1410 aaKnown RBP8.91□□□□□ -0.98
CACNA2D3-204ENST00000471363 ATAD2BQ9ULI0 1458 aa8.91□□□□□ -0.98
CACNA2D3-204ENST00000471363 ERICH3Q5RHP9 1530 aa8.91□□□□□ -0.98
CACNA2D3-204ENST00000471363 BCANQ96GW7 911 aa8.9□□□□□ -0.98
CACNA2D3-204ENST00000471363 KCNH8Q96L42 1107 aa8.9□□□□□ -0.98
CACNA2D3-204ENST00000471363 CCNB3Q8WWL7 1395 aa8.89□□□□□ -0.99
CACNA2D3-204ENST00000471363 PRXQ9BXM0 1461 aa8.89□□□□□ -0.99
CACNA2D3-204ENST00000471363 CUX2O14529 1486 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms