RNA–Protein interactions for RNA: ENST00000469376.5

OPN3-204, Transcript of opsin 3, humanhuman

TSL 1 (best)

Gene OPN3, Length 1,961 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OPN3-204ENST00000469376 TNXBP22105 4242 aa13.89□□□□□ -0.19
OPN3-204ENST00000469376 ABCA13Q86UQ4 5058 aa13.89□□□□□ -0.19
OPN3-204ENST00000469376 PCLOQ9Y6V0 5065 aa13.83□□□□□ -0.19
OPN3-204ENST00000469376 KRTAP3-1Q9BYR8 98 aa13.83□□□□□ -0.19
OPN3-204ENST00000469376 MT1HL1P0DM35 61 aa13.8□□□□□ -0.2
OPN3-204ENST00000469376 PRAC1Q96KF2 57 aa13.72□□□□□ -0.21
OPN3-204ENST00000469376 COX6B2Q6YFQ2 88 aa13.69□□□□□ -0.22
OPN3-204ENST00000469376 ADM2Q7Z4H4 148 aa13.68□□□□□ -0.22
OPN3-204ENST00000469376 H0YAA0 97 aa13.63□□□□□ -0.23
OPN3-204ENST00000469376 A0A1B0GU33 70 aa13.63□□□□□ -0.23
OPN3-204ENST00000469376 DMBT1Q9UGM3 2413 aaPredicted RBP13.62□□□□□ -0.23
OPN3-204ENST00000469376 H1FX-AS1Q4G0G2 97 aa13.6□□□□□ -0.23
OPN3-204ENST00000469376 J3QL48 77 aa13.57□□□□□ -0.24
OPN3-204ENST00000469376 RPL37P61927 97 aaKnown RBP13.44□□□□□ -0.26
OPN3-204ENST00000469376 LINC01554Q52M75 96 aa13.39□□□□□ -0.27
OPN3-204ENST00000469376 CSAG1Q6PB30 78 aa13.38□□□□□ -0.27
OPN3-204ENST00000469376 XP32Q5T750 250 aa13.32□□□□□ -0.28
OPN3-204ENST00000469376 HERC1Q15751 4861 aa13.28□□□□□ -0.28
OPN3-204ENST00000469376 K7ERS5 55 aa13.27□□□□□ -0.29
OPN3-204ENST00000469376 KRTAP3-3Q9BYR6 98 aa13.27□□□□□ -0.29
OPN3-204ENST00000469376 S4R3F8 94 aa13.19□□□□□ -0.3
OPN3-204ENST00000469376 KRTAP10-6P60371 365 aaPredicted RBP13.18□□□□□ -0.3
OPN3-204ENST00000469376 TPRXLQ17RH7 258 aa13.11□□□□□ -0.31
OPN3-204ENST00000469376 KRTAP25-1Q3LHN0 102 aa13.1□□□□□ -0.31
OPN3-204ENST00000469376 KRTAP3-2Q9BYR7 98 aa13.09□□□□□ -0.31
OPN3-204ENST00000469376 LPAP08519 4548 aa13□□□□□ -0.33
OPN3-204ENST00000469376 KRTAP13-4Q3LI77 160 aa12.99□□□□□ -0.33
OPN3-204ENST00000469376 ROMO1P60602 79 aa12.92□□□□□ -0.34
OPN3-204ENST00000469376 HMCN2Q8NDA2 5059 aa12.89□□□□□ -0.35
OPN3-204ENST00000469376 A0A0D9SG42 100 aa12.87□□□□□ -0.35
OPN3-204ENST00000469376 P0C880 135 aa12.87□□□□□ -0.35
OPN3-204ENST00000469376 LRP2P98164 4655 aa12.85□□□□□ -0.35
OPN3-204ENST00000469376 CRIPTQ9P021 101 aa12.71□□□□□ -0.37
OPN3-204ENST00000469376 SEC61BP60468 96 aaKnown RBP12.67□□□□□ -0.38
OPN3-204ENST00000469376 M0QZ58 72 aa12.6□□□□□ -0.39
OPN3-204ENST00000469376 KRTAP12-2P59991 146 aa12.59□□□□□ -0.39
OPN3-204ENST00000469376 MUC17Q685J3 4493 aa12.57□□□□□ -0.4
OPN3-204ENST00000469376 KRTAP12-1P59990 96 aa12.54□□□□□ -0.4
OPN3-204ENST00000469376 UBR4Q5T4S7 5183 aa12.51□□□□□ -0.41
OPN3-204ENST00000469376 SPINT4Q6UDR6 99 aa12.47□□□□□ -0.41
OPN3-204ENST00000469376 KRTAP4-1Q9BYQ7 146 aa12.41□□□□□ -0.42
OPN3-204ENST00000469376 C10orf95Q9H7T3 257 aa12.32□□□□□ -0.44
OPN3-204ENST00000469376 MUC2Q02817 5179 aa12.25□□□□□ -0.45
OPN3-204ENST00000469376 RNF213Q63HN8 5207 aa12.22□□□□□ -0.45
OPN3-204ENST00000469376 R4GN34 69 aa12.21□□□□□ -0.45
OPN3-204ENST00000469376 H3BS24 57 aa12.09□□□□□ -0.47
OPN3-204ENST00000469376 KRTAP19-2Q3LHN2 52 aa12.02□□□□□ -0.49
OPN3-204ENST00000469376 LORP23490 312 aaPredicted RBP11.96□□□□□ -0.49
OPN3-204ENST00000469376 KRTAP15-1Q3LI76 137 aa11.92□□□□□ -0.5
OPN3-204ENST00000469376 LCE2CQ5TA81 110 aa11.85□□□□□ -0.51
OPN3-204ENST00000469376 FLGP20930 4061 aaPredicted RBP11.8□□□□□ -0.52
OPN3-204ENST00000469376 FAT4Q6V0I7 4981 aa11.77□□□□□ -0.53
OPN3-204ENST00000469376 MT1HP80294 61 aa11.64□□□□□ -0.55
OPN3-204ENST00000469376 CAMK2N1Q7Z7J9 78 aa11.59□□□□□ -0.55
OPN3-204ENST00000469376 NDUFAF8A1L188 74 aa11.54□□□□□ -0.56
OPN3-204ENST00000469376 M0R2T5 61 aa11.53□□□□□ -0.56
OPN3-204ENST00000469376 PP632Q6XCG6 107 aa11.52□□□□□ -0.56
OPN3-204ENST00000469376 PLAC4Q8WY50 150 aa11.42□□□□□ -0.58
OPN3-204ENST00000469376 LCE2AQ5TA79 106 aaPredicted RBP11.37□□□□□ -0.59
OPN3-204ENST00000469376 TNP1P09430 55 aa11.21□□□□□ -0.61
OPN3-204ENST00000469376 KRTAP23-1A1A580 65 aa11.2□□□□□ -0.62
OPN3-204ENST00000469376 KRTAP9-8Q9BYQ0 159 aa11.17□□□□□ -0.62
OPN3-204ENST00000469376 MT2AP02795 61 aa11.12□□□□□ -0.63
OPN3-204ENST00000469376 SPRR2GQ9BYE4 73 aa11.1□□□□□ -0.63
OPN3-204ENST00000469376 MT1FP04733 61 aa11.05□□□□□ -0.64
OPN3-204ENST00000469376 KRTAP10-10P60014 251 aa11.03□□□□□ -0.64
OPN3-204ENST00000469376 KRTAP19-1Q8IUB9 90 aa10.97□□□□□ -0.65
OPN3-204ENST00000469376 LUZP6Q538Z0 58 aa10.92□□□□□ -0.66
OPN3-204ENST00000469376 KRTAP9-2Q9BYQ4 174 aa10.8□□□□□ -0.68
OPN3-204ENST00000469376 KRTAP9-3Q9BYQ3 159 aa10.78□□□□□ -0.68
OPN3-204ENST00000469376 SPRR5A0A1B0GTR4 108 aa10.71□□□□□ -0.69
OPN3-204ENST00000469376 KRTAP19-8Q3LI54 63 aa10.63□□□□□ -0.71
OPN3-204ENST00000469376 LCE2DQ5TA82 110 aaPredicted RBP10.61□□□□□ -0.71
OPN3-204ENST00000469376 LCE3AQ5TA76 89 aa10.55□□□□□ -0.72
OPN3-204ENST00000469376 FSIP2Q5CZC0 6907 aa10.53□□□□□ -0.72
OPN3-204ENST00000469376 LCE2BO14633 110 aa10.52□□□□□ -0.72
OPN3-204ENST00000469376 MT1BP07438 61 aa10.41□□□□□ -0.74
OPN3-204ENST00000469376 A0A0A0MQY5 61 aa10.38□□□□□ -0.75
OPN3-204ENST00000469376 KRTAP8-1Q8IUC2 63 aa10.37□□□□□ -0.75
OPN3-204ENST00000469376 KRTAP10-5P60370 271 aa10.35□□□□□ -0.75
OPN3-204ENST00000469376 MT1XP80297 61 aa10.34□□□□□ -0.75
OPN3-204ENST00000469376 USH2AO75445 5202 aa10.31□□□□□ -0.76
OPN3-204ENST00000469376 KRTAP9-6A0A140TA67 174 aa10.29□□□□□ -0.76
OPN3-204ENST00000469376 CRCT1Q9UGL9 99 aa10.25□□□□□ -0.77
OPN3-204ENST00000469376 KRTAP10-12P60413 245 aa10.17□□□□□ -0.78
OPN3-204ENST00000469376 KRTAP12-3P60328 96 aa10.08□□□□□ -0.8
OPN3-204ENST00000469376 SSPOA2VEC9 5147 aa10.05□□□□□ -0.8
OPN3-204ENST00000469376 PRO2289Q9P1D8 64 aa10.05□□□□□ -0.8
OPN3-204ENST00000469376 KRTAP10-7P60409 375 aaPredicted RBP10□□□□□ -0.81
OPN3-204ENST00000469376 KRTAP19-6Q3LI70 58 aa9.94□□□□□ -0.82
OPN3-204ENST00000469376 FCGBPQ9Y6R7 5405 aaPredicted RBP9.75□□□□□ -0.85
OPN3-204ENST00000469376 KRTAP19-5Q3LI72 72 aa9.62□□□□□ -0.87
OPN3-204ENST00000469376 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.53□□□□□ -0.88
OPN3-204ENST00000469376 LCE3CQ5T5A8 94 aa9.5□□□□□ -0.89
OPN3-204ENST00000469376 INE1O15225 51 aa9.47□□□□□ -0.89
OPN3-204ENST00000469376 MACF1Q9UPN3 7388 aaKnown RBP9.45□□□□□ -0.9
OPN3-204ENST00000469376 SYNE2Q8WXH0 6885 aaKnown RBP9.34□□□□□ -0.91
OPN3-204ENST00000469376 KRTAP4-8A0A0G2JLE6 195 aa9.32□□□□□ -0.92
OPN3-204ENST00000469376 KRTAP4-8Q9BYQ9 185 aa9.32□□□□□ -0.92
OPN3-204ENST00000469376 KMT2DO14686 5537 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms