RNA–Protein interactions for RNA: ENST00000469043.1

SCFD1-205, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-205ENST00000469043 RPL39P62891 51 aaKnown RBP1.71□□□□□ -2.14
SCFD1-205ENST00000469043 LELP1Q5T871 98 aa1.71□□□□□ -2.14
SCFD1-205ENST00000469043 Q6ZSA8 131 aa1.71□□□□□ -2.14
SCFD1-205ENST00000469043 DEFB131BA0A096LNP1 70 aa1.7□□□□□ -2.14
SCFD1-205ENST00000469043 A0A096LPF7 62 aa1.7□□□□□ -2.14
SCFD1-205ENST00000469043 DEFB4AO15263 64 aa1.7□□□□□ -2.14
SCFD1-205ENST00000469043 COL7A1Q02388 2944 aa1.7□□□□□ -2.14
SCFD1-205ENST00000469043 SSBP3-AS1Q7Z2R9 100 aa1.7□□□□□ -2.14
SCFD1-205ENST00000469043 DNHD1Q96M86 4753 aa1.69□□□□□ -2.14
SCFD1-205ENST00000469043 HTN3P15516 51 aa1.69□□□□□ -2.14
SCFD1-205ENST00000469043 LINC01556Q5JQF7 62 aa1.69□□□□□ -2.14
SCFD1-205ENST00000469043 DNAH7Q8WXX0 4024 aa1.69□□□□□ -2.14
SCFD1-205ENST00000469043 FBN3Q75N90 2809 aa1.69□□□□□ -2.14
SCFD1-205ENST00000469043 TGP01266 2768 aa1.69□□□□□ -2.14
SCFD1-205ENST00000469043 DYNC2H1Q8NCM8 4307 aaKnown RBP1.68□□□□□ -2.14
SCFD1-205ENST00000469043 LINC00959A0A1B0GUT2 108 aa1.68□□□□□ -2.14
SCFD1-205ENST00000469043 NDUFA1O15239 70 aa1.68□□□□□ -2.14
SCFD1-205ENST00000469043 DEFB104AQ8WTQ1 72 aa1.68□□□□□ -2.14
SCFD1-205ENST00000469043 CDKN2A-AS1Q9UH64 79 aa1.68□□□□□ -2.14
SCFD1-205ENST00000469043 NDUFB1O75438 58 aa1.67□□□□□ -2.14
SCFD1-205ENST00000469043 Q8IZM0 81 aa1.67□□□□□ -2.14
SCFD1-205ENST00000469043 TENM2Q9NT68 2774 aa1.67□□□□□ -2.14
SCFD1-205ENST00000469043 DNAH6Q9C0G6 4158 aa1.66□□□□□ -2.14
SCFD1-205ENST00000469043 COX6A2Q02221 97 aa1.66□□□□□ -2.14
SCFD1-205ENST00000469043 ENHOQ6UWT2 76 aa1.66□□□□□ -2.14
SCFD1-205ENST00000469043 WFDC10BQ8IUB3 73 aa1.66□□□□□ -2.14
SCFD1-205ENST00000469043 APLNQ9ULZ1 77 aa1.66□□□□□ -2.14
SCFD1-205ENST00000469043 CSMD3Q7Z407 3707 aa1.66□□□□□ -2.14
SCFD1-205ENST00000469043 STARD9Q9P2P6 4700 aa1.65□□□□□ -2.15
SCFD1-205ENST00000469043 PLECQ15149 4684 aaKnown RBP1.65□□□□□ -2.15
SCFD1-205ENST00000469043 VPS13DQ5THJ4 4388 aa1.64□□□□□ -2.15
SCFD1-205ENST00000469043 CLPSL2Q6UWE3 100 aa1.64□□□□□ -2.15
SCFD1-205ENST00000469043 LINC00308Q8TCZ7 52 aa1.64□□□□□ -2.15
SCFD1-205ENST00000469043 TOMM7Q9P0U1 55 aa1.64□□□□□ -2.15
SCFD1-205ENST00000469043 DNAH1Q9P2D7 4330 aa1.64□□□□□ -2.15
SCFD1-205ENST00000469043 MEGF8Q7Z7M0 2845 aa1.63□□□□□ -2.15
SCFD1-205ENST00000469043 LYSTQ99698 3801 aa1.63□□□□□ -2.15
SCFD1-205ENST00000469043 LINC00158P58513 81 aa1.63□□□□□ -2.15
SCFD1-205ENST00000469043 KMT2AQ03164 3969 aa1.63□□□□□ -2.15
SCFD1-205ENST00000469043 ALMS1Q8TCU4 4167 aa1.62□□□□□ -2.15
SCFD1-205ENST00000469043 C6orf48Q9UBA6 75 aa1.62□□□□□ -2.15
SCFD1-205ENST00000469043 H0YGX0 51 aa1.61□□□□□ -2.15
SCFD1-205ENST00000469043 ATXN8Q156A1 80 aa1.6□□□□□ -2.15
SCFD1-205ENST00000469043 NREPQ16612 68 aa1.6□□□□□ -2.15
SCFD1-205ENST00000469043 DNAH10Q8IVF4 4471 aa1.6□□□□□ -2.15
SCFD1-205ENST00000469043 FRAS1Q86XX4 4008 aa1.59□□□□□ -2.15
SCFD1-205ENST00000469043 DNAH2Q9P225 4427 aa1.59□□□□□ -2.15
SCFD1-205ENST00000469043 COX7BP24311 80 aa1.59□□□□□ -2.15
SCFD1-205ENST00000469043 HECTD4Q9Y4D8 3996 aa1.59□□□□□ -2.16
SCFD1-205ENST00000469043 DNAH17Q9UFH2 4485 aa1.59□□□□□ -2.16
SCFD1-205ENST00000469043 KCNQ1DNQ9H478 68 aa1.58□□□□□ -2.16
SCFD1-205ENST00000469043 HYDINQ4G0P3 5121 aa1.57□□□□□ -2.16
SCFD1-205ENST00000469043 SACSQ9NZJ4 4579 aa1.57□□□□□ -2.16
SCFD1-205ENST00000469043 A0A096LNI7 61 aa1.57□□□□□ -2.16
SCFD1-205ENST00000469043 SPRR1AP35321 89 aa1.57□□□□□ -2.16
SCFD1-205ENST00000469043 TP53AIP1Q9HCN2 124 aa1.57□□□□□ -2.16
SCFD1-205ENST00000469043 LCE6AA0A183 80 aa1.56□□□□□ -2.16
SCFD1-205ENST00000469043 C10orf95Q9H7T3 257 aa1.56□□□□□ -2.16
SCFD1-205ENST00000469043 DNAH5Q8TE73 4624 aa1.56□□□□□ -2.16
SCFD1-205ENST00000469043 FAT2Q9NYQ8 4349 aa1.55□□□□□ -2.16
SCFD1-205ENST00000469043 ETDCA0A1B0GVM5 59 aa1.55□□□□□ -2.16
SCFD1-205ENST00000469043 DNAH8Q96JB1 4490 aa1.55□□□□□ -2.16
SCFD1-205ENST00000469043 RYR2Q92736 4967 aa1.55□□□□□ -2.16
SCFD1-205ENST00000469043 DNAH11Q96DT5 4516 aa1.54□□□□□ -2.16
SCFD1-205ENST00000469043 PKHD1P08F94 4074 aa1.54□□□□□ -2.16
SCFD1-205ENST00000469043 IGLV5-48A0A075B6I7 105 aa1.54□□□□□ -2.16
SCFD1-205ENST00000469043 KRTAP10-4P60372 401 aaPredicted RBP1.54□□□□□ -2.16
SCFD1-205ENST00000469043 A0A0D9SG42 100 aa1.53□□□□□ -2.16
SCFD1-205ENST00000469043 PKD1P98161 4303 aa1.53□□□□□ -2.16
SCFD1-205ENST00000469043 VPS13BQ7Z7G8 4022 aa1.53□□□□□ -2.16
SCFD1-205ENST00000469043 KMT2CQ8NEZ4 4911 aaKnown RBP1.53□□□□□ -2.16
SCFD1-205ENST00000469043 FCGBPQ9Y6R7 5405 aaPredicted RBP1.53□□□□□ -2.17
SCFD1-205ENST00000469043 SPRR1BP22528 89 aa1.52□□□□□ -2.17
SCFD1-205ENST00000469043 LRP1BQ9NZR2 4599 aa1.51□□□□□ -2.17
SCFD1-205ENST00000469043 PRLHP81277 87 aa1.51□□□□□ -2.17
SCFD1-205ENST00000469043 DYNC1H1Q14204 4646 aaKnown RBP1.5□□□□□ -2.17
SCFD1-205ENST00000469043 SRRM2Q9UQ35 2752 aaKnown RBP1.5□□□□□ -2.17
SCFD1-205ENST00000469043 UBL5Q9BZL1 73 aa1.5□□□□□ -2.17
SCFD1-205ENST00000469043 CRIPTQ9P021 101 aa1.5□□□□□ -2.17
SCFD1-205ENST00000469043 SPINK6Q6UWN8 80 aa1.49□□□□□ -2.17
SCFD1-205ENST00000469043 DEFB105AQ8NG35 78 aa1.49□□□□□ -2.17
SCFD1-205ENST00000469043 APOBP04114 4563 aaKnown RBP1.49□□□□□ -2.17
SCFD1-205ENST00000469043 RYR3Q15413 4870 aa1.48□□□□□ -2.17
SCFD1-205ENST00000469043 BIRC6Q9NR09 4857 aa1.48□□□□□ -2.17
SCFD1-205ENST00000469043 HMCN1Q96RW7 5635 aa1.48□□□□□ -2.17
SCFD1-205ENST00000469043 DMBT1Q9UGM3 2413 aaPredicted RBP1.48□□□□□ -2.17
SCFD1-205ENST00000469043 RYR1P21817 5038 aa1.48□□□□□ -2.17
SCFD1-205ENST00000469043 K7EQZ3 153 aa1.47□□□□□ -2.17
SCFD1-205ENST00000469043 PKHD1L1Q86WI1 4243 aa1.47□□□□□ -2.17
SCFD1-205ENST00000469043 RPS29P62273 56 aaKnown RBP1.46□□□□□ -2.18
SCFD1-205ENST00000469043 HSPG2P98160 4391 aa1.46□□□□□ -2.18
SCFD1-205ENST00000469043 FAT1Q14517 4588 aa1.45□□□□□ -2.18
SCFD1-205ENST00000469043 SPINK1P00995 79 aa1.45□□□□□ -2.18
SCFD1-205ENST00000469043 KIAA1109Q2LD37 5005 aa1.44□□□□□ -2.18
SCFD1-205ENST00000469043 PCLOQ9Y6V0 5065 aa1.43□□□□□ -2.18
SCFD1-205ENST00000469043 SMR3BP02814 79 aaPredicted RBP1.43□□□□□ -2.18
SCFD1-205ENST00000469043 Q5VSD8 79 aa1.43□□□□□ -2.18
SCFD1-205ENST00000469043 EPPK1P58107 5090 aaKnown RBP1.43□□□□□ -2.18
SCFD1-205ENST00000469043 TNXBP22105 4242 aa1.42□□□□□ -2.18
SCFD1-205ENST00000469043 MRPL34Q9BQ48 92 aaKnown RBP1.41□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms