RNA–Protein interactions for RNA: ENST00000466425.1

PSMB4-202, Transcript of proteasome subunit beta 4, humanhuman

TSL 2

Gene PSMB4, Length 665 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB4-202ENST00000466425 DNAH5Q8TE73 4624 aa3.7□□□□□ -1.82
PSMB4-202ENST00000466425 KRTAP10-4P60372 401 aaPredicted RBP3.69□□□□□ -1.82
PSMB4-202ENST00000466425 DYNC1H1Q14204 4646 aaKnown RBP3.69□□□□□ -1.82
PSMB4-202ENST00000466425 HSPG2P98160 4391 aa3.68□□□□□ -1.82
PSMB4-202ENST00000466425 KIAA1109Q2LD37 5005 aa3.68□□□□□ -1.82
PSMB4-202ENST00000466425 DNAH8Q96JB1 4490 aa3.68□□□□□ -1.82
PSMB4-202ENST00000466425 LRP1BQ9NZR2 4599 aa3.67□□□□□ -1.82
PSMB4-202ENST00000466425 VPS13BQ7Z7G8 4022 aa3.66□□□□□ -1.82
PSMB4-202ENST00000466425 CHKB-CPT1BH3BT56 60 aa3.66□□□□□ -1.82
PSMB4-202ENST00000466425 HRES1P13985 223 aa3.66□□□□□ -1.82
PSMB4-202ENST00000466425 DMAC1Q96GE9 116 aa3.66□□□□□ -1.82
PSMB4-202ENST00000466425 RYR1P21817 5038 aa3.66□□□□□ -1.82
PSMB4-202ENST00000466425 C7orf65Q6ZTY9 151 aa3.65□□□□□ -1.83
PSMB4-202ENST00000466425 APOBP04114 4563 aaKnown RBP3.64□□□□□ -1.83
PSMB4-202ENST00000466425 IGKV2D-30A0A075B6S6 120 aa3.64□□□□□ -1.83
PSMB4-202ENST00000466425 BRK1Q8WUW1 75 aa3.64□□□□□ -1.83
PSMB4-202ENST00000466425 C20orf166-AS1Q96NR2 134 aa3.64□□□□□ -1.83
PSMB4-202ENST00000466425 RETNLBQ9BQ08 111 aa3.64□□□□□ -1.83
PSMB4-202ENST00000466425 LINC01558Q9Y6Z2 57 aa3.64□□□□□ -1.83
PSMB4-202ENST00000466425 FLG2Q5D862 2391 aaPredicted RBP3.64□□□□□ -1.83
PSMB4-202ENST00000466425 A8MUN3 132 aa3.63□□□□□ -1.83
PSMB4-202ENST00000466425 A8MUU9 505 aa3.63□□□□□ -1.83
PSMB4-202ENST00000466425 PSPHP1O15172 72 aa3.63□□□□□ -1.83
PSMB4-202ENST00000466425 PRR15LQ9BU68 103 aa3.63□□□□□ -1.83
PSMB4-202ENST00000466425 PCLOQ9Y6V0 5065 aa3.63□□□□□ -1.83
PSMB4-202ENST00000466425 HERC2O95714 4834 aa3.62□□□□□ -1.83
PSMB4-202ENST00000466425 Q5VSD8 79 aa3.62□□□□□ -1.83
PSMB4-202ENST00000466425 KRTAP10-8P60410 259 aa3.6□□□□□ -1.83
PSMB4-202ENST00000466425 Q5VV11 94 aa3.6□□□□□ -1.83
PSMB4-202ENST00000466425 PKHD1L1Q86WI1 4243 aa3.59□□□□□ -1.83
PSMB4-202ENST00000466425 C9orf92A6NGG3 77 aa3.59□□□□□ -1.83
PSMB4-202ENST00000466425 SPTSSBQ8NFR3 76 aa3.59□□□□□ -1.83
PSMB4-202ENST00000466425 DMBT1Q9UGM3 2413 aaPredicted RBP3.59□□□□□ -1.84
PSMB4-202ENST00000466425 LCE1AQ5T7P2 110 aa3.58□□□□□ -1.84
PSMB4-202ENST00000466425 A6NED7 52 aa3.56□□□□□ -1.84
PSMB4-202ENST00000466425 ABCA13Q86UQ4 5058 aa3.56□□□□□ -1.84
PSMB4-202ENST00000466425 ATP11AUNQ6ZP68 121 aa3.55□□□□□ -1.84
PSMB4-202ENST00000466425 A0A1B0GU69 56 aa3.54□□□□□ -1.84
PSMB4-202ENST00000466425 SPINK7P58062 85 aa3.53□□□□□ -1.84
PSMB4-202ENST00000466425 CDC42SE1Q9NRR8 79 aa3.53□□□□□ -1.84
PSMB4-202ENST00000466425 FAT1Q14517 4588 aa3.52□□□□□ -1.85
PSMB4-202ENST00000466425 RPL37P61927 97 aaKnown RBP3.5□□□□□ -1.85
PSMB4-202ENST00000466425 MYCBP2O75592 4640 aa3.5□□□□□ -1.85
PSMB4-202ENST00000466425 PMAIP1Q13794 54 aa3.49□□□□□ -1.85
PSMB4-202ENST00000466425 COX6B2Q6YFQ2 88 aa3.49□□□□□ -1.85
PSMB4-202ENST00000466425 UQCR11O14957 56 aa3.48□□□□□ -1.85
PSMB4-202ENST00000466425 MT1HL1P0DM35 61 aa3.47□□□□□ -1.85
PSMB4-202ENST00000466425 LCA10Q71F78 164 aa3.47□□□□□ -1.85
PSMB4-202ENST00000466425 TPRXLQ17RH7 258 aa3.45□□□□□ -1.86
PSMB4-202ENST00000466425 MIR22HGQ0VDD5 57 aa3.44□□□□□ -1.86
PSMB4-202ENST00000466425 SPATA8Q6RVD6 105 aa3.44□□□□□ -1.86
PSMB4-202ENST00000466425 FAT3Q8TDW7 4589 aa3.44□□□□□ -1.86
PSMB4-202ENST00000466425 TNXBP22105 4242 aa3.43□□□□□ -1.86
PSMB4-202ENST00000466425 KRTAP2-2Q9BYT5 123 aa3.43□□□□□ -1.86
PSMB4-202ENST00000466425 LRP1Q07954 4544 aaKnown RBP3.43□□□□□ -1.86
PSMB4-202ENST00000466425 KTN1-AS1Q86SY8 53 aa3.41□□□□□ -1.86
PSMB4-202ENST00000466425 A8MU10 97 aa3.39□□□□□ -1.87
PSMB4-202ENST00000466425 A0A1B0GU33 70 aa3.38□□□□□ -1.87
PSMB4-202ENST00000466425 A6NN06 94 aa3.38□□□□□ -1.87
PSMB4-202ENST00000466425 RBM12B-AS1Q9P1G2 102 aa3.38□□□□□ -1.87
PSMB4-202ENST00000466425 HERC1Q15751 4861 aa3.37□□□□□ -1.87
PSMB4-202ENST00000466425 H1FX-AS1Q4G0G2 97 aa3.37□□□□□ -1.87
PSMB4-202ENST00000466425 S4R3F8 94 aa3.37□□□□□ -1.87
PSMB4-202ENST00000466425 OBSCNQ5VST9 7968 aa3.36□□□□□ -1.87
PSMB4-202ENST00000466425 K7ERS5 55 aa3.33□□□□□ -1.88
PSMB4-202ENST00000466425 CSAG1Q6PB30 78 aa3.3□□□□□ -1.88
PSMB4-202ENST00000466425 KRTAP5-2Q701N4 177 aa3.3□□□□□ -1.88
PSMB4-202ENST00000466425 H0YAA0 97 aa3.29□□□□□ -1.88
PSMB4-202ENST00000466425 NDUFAF8A1L188 74 aa3.28□□□□□ -1.88
PSMB4-202ENST00000466425 KRTAP4-3Q9BYR4 195 aa3.28□□□□□ -1.88
PSMB4-202ENST00000466425 HMCN2Q8NDA2 5059 aa3.27□□□□□ -1.89
PSMB4-202ENST00000466425 MT3P25713 68 aa3.24□□□□□ -1.89
PSMB4-202ENST00000466425 ADM2Q7Z4H4 148 aa3.23□□□□□ -1.89
PSMB4-202ENST00000466425 M0QZ58 72 aa3.22□□□□□ -1.89
PSMB4-202ENST00000466425 LRP2P98164 4655 aa3.22□□□□□ -1.89
PSMB4-202ENST00000466425 UBR4Q5T4S7 5183 aa3.21□□□□□ -1.9
PSMB4-202ENST00000466425 P0C880 135 aa3.19□□□□□ -1.9
PSMB4-202ENST00000466425 LPAP08519 4548 aa3.18□□□□□ -1.9
PSMB4-202ENST00000466425 A0A0D9SG42 100 aa3.17□□□□□ -1.9
PSMB4-202ENST00000466425 CAMK2N1Q7Z7J9 78 aa3.16□□□□□ -1.9
PSMB4-202ENST00000466425 ROMO1P60602 79 aa3.15□□□□□ -1.91
PSMB4-202ENST00000466425 KRTAP13-4Q3LI77 160 aa3.15□□□□□ -1.91
PSMB4-202ENST00000466425 LINC01554Q52M75 96 aa3.15□□□□□ -1.91
PSMB4-202ENST00000466425 RNF213Q63HN8 5207 aa3.15□□□□□ -1.91
PSMB4-202ENST00000466425 KRTAP4-1Q9BYQ7 146 aa3.13□□□□□ -1.91
PSMB4-202ENST00000466425 R4GN34 69 aa3.13□□□□□ -1.91
PSMB4-202ENST00000466425 KRTAP9-6A8MVA2 160 aa3.12□□□□□ -1.91
PSMB4-202ENST00000466425 KRTAP25-1Q3LHN0 102 aa3.1□□□□□ -1.91
PSMB4-202ENST00000466425 SPINT4Q6UDR6 99 aa3.1□□□□□ -1.91
PSMB4-202ENST00000466425 KRTAP12-1P59990 96 aa3.09□□□□□ -1.91
PSMB4-202ENST00000466425 KRTAP19-2Q3LHN2 52 aa3.08□□□□□ -1.92
PSMB4-202ENST00000466425 MUC17Q685J3 4493 aa3.07□□□□□ -1.92
PSMB4-202ENST00000466425 KRTAP12-2P59991 146 aa3.07□□□□□ -1.92
PSMB4-202ENST00000466425 CRIPTQ9P021 101 aa3.07□□□□□ -1.92
PSMB4-202ENST00000466425 MUC2Q02817 5179 aa3.06□□□□□ -1.92
PSMB4-202ENST00000466425 KRTAP10-5P60370 271 aa3.03□□□□□ -1.92
PSMB4-202ENST00000466425 LUZP6Q538Z0 58 aa3.03□□□□□ -1.92
PSMB4-202ENST00000466425 FLGP20930 4061 aaPredicted RBP2.97□□□□□ -1.93
PSMB4-202ENST00000466425 FAT4Q6V0I7 4981 aa2.97□□□□□ -1.93
PSMB4-202ENST00000466425 M0R2T5 61 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 111.9 ms