RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 KMT2AQ03164 3969 aa5.13□□□□□ -1.59
UFD1-205ENST00000459854 DNAH5Q8TE73 4624 aa5.11□□□□□ -1.59
UFD1-205ENST00000459854 DNAH2Q9P225 4427 aa5.1□□□□□ -1.59
UFD1-205ENST00000459854 DYNC1H1Q14204 4646 aaKnown RBP5.09□□□□□ -1.59
UFD1-205ENST00000459854 KRTAP4-5Q9BYR2 181 aa5.08□□□□□ -1.6
UFD1-205ENST00000459854 KRTAP13-3Q3SY46 172 aa5.08□□□□□ -1.6
UFD1-205ENST00000459854 KMT2CQ8NEZ4 4911 aaKnown RBP5.07□□□□□ -1.6
UFD1-205ENST00000459854 HYDINQ4G0P3 5121 aa5.05□□□□□ -1.6
UFD1-205ENST00000459854 LRP1BQ9NZR2 4599 aa5.05□□□□□ -1.6
UFD1-205ENST00000459854 MT1HL1P0DM35 61 aa5.02□□□□□ -1.61
UFD1-205ENST00000459854 LYSTQ99698 3801 aa5.01□□□□□ -1.61
UFD1-205ENST00000459854 TPRXLQ17RH7 258 aa5□□□□□ -1.61
UFD1-205ENST00000459854 FAT2Q9NYQ8 4349 aa5□□□□□ -1.61
UFD1-205ENST00000459854 BIRC6Q9NR09 4857 aa5□□□□□ -1.61
UFD1-205ENST00000459854 RYR3Q15413 4870 aa4.99□□□□□ -1.61
UFD1-205ENST00000459854 XP32Q5T750 250 aa4.97□□□□□ -1.61
UFD1-205ENST00000459854 KIAA1109Q2LD37 5005 aa4.95□□□□□ -1.62
UFD1-205ENST00000459854 RYR1P21817 5038 aa4.94□□□□□ -1.62
UFD1-205ENST00000459854 DNAH8Q96JB1 4490 aa4.94□□□□□ -1.62
UFD1-205ENST00000459854 SRRM2Q9UQ35 2752 aaKnown RBP4.94□□□□□ -1.62
UFD1-205ENST00000459854 INE1O15225 51 aa4.93□□□□□ -1.62
UFD1-205ENST00000459854 KRTAP13-4Q3LI77 160 aa4.93□□□□□ -1.62
UFD1-205ENST00000459854 PKD1P98161 4303 aa4.9□□□□□ -1.63
UFD1-205ENST00000459854 APOBP04114 4563 aaKnown RBP4.9□□□□□ -1.63
UFD1-205ENST00000459854 FAT1Q14517 4588 aa4.89□□□□□ -1.63
UFD1-205ENST00000459854 HECTD4Q9Y4D8 3996 aa4.88□□□□□ -1.63
UFD1-205ENST00000459854 FRAS1Q86XX4 4008 aa4.88□□□□□ -1.63
UFD1-205ENST00000459854 PRO2289Q9P1D8 64 aa4.88□□□□□ -1.63
UFD1-205ENST00000459854 KRTAP12-2P59991 146 aa4.86□□□□□ -1.63
UFD1-205ENST00000459854 KRTAP17-1Q9BYP8 105 aa4.86□□□□□ -1.63
UFD1-205ENST00000459854 EPPK1P58107 5090 aaKnown RBP4.85□□□□□ -1.63
UFD1-205ENST00000459854 PKHD1P08F94 4074 aa4.85□□□□□ -1.63
UFD1-205ENST00000459854 KRTAP12-1P59990 96 aa4.84□□□□□ -1.63
UFD1-205ENST00000459854 HSPG2P98160 4391 aa4.82□□□□□ -1.64
UFD1-205ENST00000459854 KRTAP15-1Q3LI76 137 aa4.82□□□□□ -1.64
UFD1-205ENST00000459854 HERC2O95714 4834 aa4.78□□□□□ -1.64
UFD1-205ENST00000459854 VPS13BQ7Z7G8 4022 aa4.77□□□□□ -1.65
UFD1-205ENST00000459854 KRTAP3-1Q9BYR8 98 aa4.67□□□□□ -1.66
UFD1-205ENST00000459854 KRTAP10-6P60371 365 aaPredicted RBP4.65□□□□□ -1.66
UFD1-205ENST00000459854 KRTAP10-10P60014 251 aa4.65□□□□□ -1.67
UFD1-205ENST00000459854 LRP1Q07954 4544 aaKnown RBP4.62□□□□□ -1.67
UFD1-205ENST00000459854 ABCA13Q86UQ4 5058 aa4.62□□□□□ -1.67
UFD1-205ENST00000459854 KRTAP23-1A1A580 65 aa4.62□□□□□ -1.67
UFD1-205ENST00000459854 FAT3Q8TDW7 4589 aa4.6□□□□□ -1.67
UFD1-205ENST00000459854 MYCBP2O75592 4640 aa4.58□□□□□ -1.68
UFD1-205ENST00000459854 PCLOQ9Y6V0 5065 aa4.58□□□□□ -1.68
UFD1-205ENST00000459854 PKHD1L1Q86WI1 4243 aa4.56□□□□□ -1.68
UFD1-205ENST00000459854 TNXBP22105 4242 aa4.47□□□□□ -1.69
UFD1-205ENST00000459854 KRTAP3-2Q9BYR7 98 aa4.46□□□□□ -1.7
UFD1-205ENST00000459854 HERC1Q15751 4861 aa4.43□□□□□ -1.7
UFD1-205ENST00000459854 KRTAP4-1Q9BYQ7 146 aa4.4□□□□□ -1.71
UFD1-205ENST00000459854 KRTAP3-3Q9BYR6 98 aa4.37□□□□□ -1.71
UFD1-205ENST00000459854 LRP2P98164 4655 aa4.32□□□□□ -1.72
UFD1-205ENST00000459854 HMCN2Q8NDA2 5059 aa4.31□□□□□ -1.72
UFD1-205ENST00000459854 KRTAP10-12P60413 245 aa4.28□□□□□ -1.73
UFD1-205ENST00000459854 MT1HP80294 61 aa4.28□□□□□ -1.73
UFD1-205ENST00000459854 LPAP08519 4548 aa4.25□□□□□ -1.73
UFD1-205ENST00000459854 KRTAP12-3P60328 96 aa4.23□□□□□ -1.73
UFD1-205ENST00000459854 MUC17Q685J3 4493 aa4.19□□□□□ -1.74
UFD1-205ENST00000459854 LCE2CQ5TA81 110 aa4.15□□□□□ -1.74
UFD1-205ENST00000459854 RNF213Q63HN8 5207 aa4.15□□□□□ -1.75
UFD1-205ENST00000459854 UBR4Q5T4S7 5183 aa4.12□□□□□ -1.75
UFD1-205ENST00000459854 KRTAP19-2Q3LHN2 52 aa4.12□□□□□ -1.75
UFD1-205ENST00000459854 LCE3AQ5TA76 89 aa4.11□□□□□ -1.75
UFD1-205ENST00000459854 MT2AP02795 61 aa4.08□□□□□ -1.76
UFD1-205ENST00000459854 LORP23490 312 aaPredicted RBP4.05□□□□□ -1.76
UFD1-205ENST00000459854 LCE2AQ5TA79 106 aaPredicted RBP4.05□□□□□ -1.76
UFD1-205ENST00000459854 MT1FP04733 61 aa4.02□□□□□ -1.77
UFD1-205ENST00000459854 FAT4Q6V0I7 4981 aa4.02□□□□□ -1.77
UFD1-205ENST00000459854 KRTAP19-4Q3LI73 84 aa4□□□□□ -1.77
UFD1-205ENST00000459854 KRTAP9-8Q9BYQ0 159 aa3.98□□□□□ -1.77
UFD1-205ENST00000459854 FLGP20930 4061 aaPredicted RBP3.96□□□□□ -1.78
UFD1-205ENST00000459854 SPRR2GQ9BYE4 73 aa3.94□□□□□ -1.78
UFD1-205ENST00000459854 MUC2Q02817 5179 aa3.91□□□□□ -1.78
UFD1-205ENST00000459854 KRTAP10-5P60370 271 aa3.9□□□□□ -1.78
UFD1-205ENST00000459854 LCE2DQ5TA82 110 aaPredicted RBP3.88□□□□□ -1.79
UFD1-205ENST00000459854 CRCT1Q9UGL9 99 aa3.88□□□□□ -1.79
UFD1-205ENST00000459854 KRTAP9-3Q9BYQ3 159 aa3.87□□□□□ -1.79
UFD1-205ENST00000459854 KRTAP9-2Q9BYQ4 174 aa3.85□□□□□ -1.79
UFD1-205ENST00000459854 KRTAP19-1Q8IUB9 90 aa3.83□□□□□ -1.8
UFD1-205ENST00000459854 KRTAP19-8Q3LI54 63 aa3.83□□□□□ -1.8
UFD1-205ENST00000459854 KRTAP8-1Q8IUC2 63 aa3.79□□□□□ -1.8
UFD1-205ENST00000459854 LCE2BO14633 110 aa3.75□□□□□ -1.81
UFD1-205ENST00000459854 LCE3CQ5T5A8 94 aa3.73□□□□□ -1.81
UFD1-205ENST00000459854 MT1BP07438 61 aa3.72□□□□□ -1.81
UFD1-205ENST00000459854 SPRR5A0A1B0GTR4 108 aa3.72□□□□□ -1.81
UFD1-205ENST00000459854 KRTAP9-6A0A140TA67 174 aa3.68□□□□□ -1.82
UFD1-205ENST00000459854 KRTAP19-6Q3LI70 58 aa3.65□□□□□ -1.82
UFD1-205ENST00000459854 MT1XP80297 61 aa3.59□□□□□ -1.83
UFD1-205ENST00000459854 KRTAP19-5Q3LI72 72 aa3.59□□□□□ -1.84
UFD1-205ENST00000459854 FSIP2Q5CZC0 6907 aa3.56□□□□□ -1.84
UFD1-205ENST00000459854 KRTAP10-7P60409 375 aaPredicted RBP3.51□□□□□ -1.85
UFD1-205ENST00000459854 SPRR2FQ96RM1 72 aa3.5□□□□□ -1.85
UFD1-205ENST00000459854 USH2AO75445 5202 aa3.48□□□□□ -1.85
UFD1-205ENST00000459854 KRTAP12-4P60329 112 aa3.47□□□□□ -1.85
UFD1-205ENST00000459854 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.4□□□□□ -1.86
UFD1-205ENST00000459854 SPRR2EP22531 72 aa3.39□□□□□ -1.87
UFD1-205ENST00000459854 SPRR2BP35325 72 aa3.39□□□□□ -1.87
UFD1-205ENST00000459854 SPRR2AP35326 72 aa3.39□□□□□ -1.87
UFD1-205ENST00000459854 KRTAP9-7A8MTY7 169 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 114.3 ms