RNA–Protein interactions for RNA: ENST00000457953.6

KCNMA1-216, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 3,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-216ENST00000457953 DNAH5Q8TE73 4624 aa7.06□□□□□ -1.28
KCNMA1-216ENST00000457953 KRTAP10-8P60410 259 aa7.05□□□□□ -1.28
KCNMA1-216ENST00000457953 A0A1B0GVY2 172 aa6.99□□□□□ -1.29
KCNMA1-216ENST00000457953 XP32Q5T750 250 aa6.97□□□□□ -1.29
KCNMA1-216ENST00000457953 LRP1BQ9NZR2 4599 aa6.93□□□□□ -1.3
KCNMA1-216ENST00000457953 PKD1P98161 4303 aa6.93□□□□□ -1.3
KCNMA1-216ENST00000457953 TNP1P09430 55 aa6.89□□□□□ -1.31
KCNMA1-216ENST00000457953 FAT2Q9NYQ8 4349 aa6.88□□□□□ -1.31
KCNMA1-216ENST00000457953 VPS13BQ7Z7G8 4022 aa6.85□□□□□ -1.31
KCNMA1-216ENST00000457953 FAT1Q14517 4588 aa6.84□□□□□ -1.31
KCNMA1-216ENST00000457953 TPRXLQ17RH7 258 aa6.83□□□□□ -1.32
KCNMA1-216ENST00000457953 SACSQ9NZJ4 4579 aa6.82□□□□□ -1.32
KCNMA1-216ENST00000457953 KRTAP3-1Q9BYR8 98 aa6.82□□□□□ -1.32
KCNMA1-216ENST00000457953 KRTAP12-2P59991 146 aa6.81□□□□□ -1.32
KCNMA1-216ENST00000457953 HYDINQ4G0P3 5121 aa6.77□□□□□ -1.33
KCNMA1-216ENST00000457953 KRTAP15-1Q3LI76 137 aa6.74□□□□□ -1.33
KCNMA1-216ENST00000457953 KRTAP13-4Q3LI77 160 aa6.7□□□□□ -1.34
KCNMA1-216ENST00000457953 KRTAP10-4P60372 401 aaPredicted RBP6.68□□□□□ -1.34
KCNMA1-216ENST00000457953 PKHD1L1Q86WI1 4243 aa6.67□□□□□ -1.34
KCNMA1-216ENST00000457953 PP632Q6XCG6 107 aa6.67□□□□□ -1.34
KCNMA1-216ENST00000457953 MYCBP2O75592 4640 aa6.65□□□□□ -1.34
KCNMA1-216ENST00000457953 KRTAP12-1P59990 96 aa6.65□□□□□ -1.34
KCNMA1-216ENST00000457953 KRTAP4-5Q9BYR2 181 aa6.65□□□□□ -1.34
KCNMA1-216ENST00000457953 DYNC1H1Q14204 4646 aaKnown RBP6.64□□□□□ -1.35
KCNMA1-216ENST00000457953 APOBP04114 4563 aaKnown RBP6.63□□□□□ -1.35
KCNMA1-216ENST00000457953 PKHD1P08F94 4074 aa6.6□□□□□ -1.35
KCNMA1-216ENST00000457953 KIAA1109Q2LD37 5005 aa6.6□□□□□ -1.35
KCNMA1-216ENST00000457953 KRTAP10-6P60371 365 aaPredicted RBP6.59□□□□□ -1.35
KCNMA1-216ENST00000457953 RYR1P21817 5038 aa6.57□□□□□ -1.36
KCNMA1-216ENST00000457953 MT1HL1P0DM35 61 aa6.55□□□□□ -1.36
KCNMA1-216ENST00000457953 FAT3Q8TDW7 4589 aa6.52□□□□□ -1.37
KCNMA1-216ENST00000457953 KRTAP3-2Q9BYR7 98 aa6.49□□□□□ -1.37
KCNMA1-216ENST00000457953 KRTAP10-10P60014 251 aa6.47□□□□□ -1.37
KCNMA1-216ENST00000457953 KRTAP3-3Q9BYR6 98 aa6.47□□□□□ -1.37
KCNMA1-216ENST00000457953 LRP1Q07954 4544 aaKnown RBP6.45□□□□□ -1.38
KCNMA1-216ENST00000457953 RYR3Q15413 4870 aa6.42□□□□□ -1.38
KCNMA1-216ENST00000457953 RYR2Q92736 4967 aa6.37□□□□□ -1.39
KCNMA1-216ENST00000457953 TNXBP22105 4242 aa6.37□□□□□ -1.39
KCNMA1-216ENST00000457953 KMT2CQ8NEZ4 4911 aaKnown RBP6.32□□□□□ -1.4
KCNMA1-216ENST00000457953 HSPG2P98160 4391 aa6.29□□□□□ -1.4
KCNMA1-216ENST00000457953 KRTAP17-1Q9BYP8 105 aa6.22□□□□□ -1.41
KCNMA1-216ENST00000457953 LRP2P98164 4655 aa6.18□□□□□ -1.42
KCNMA1-216ENST00000457953 LORP23490 312 aaPredicted RBP6.07□□□□□ -1.44
KCNMA1-216ENST00000457953 PRO2289Q9P1D8 64 aa6.06□□□□□ -1.44
KCNMA1-216ENST00000457953 HERC2O95714 4834 aa6.06□□□□□ -1.44
KCNMA1-216ENST00000457953 KRTAP4-1Q9BYQ7 146 aa6.04□□□□□ -1.44
KCNMA1-216ENST00000457953 EPPK1P58107 5090 aaKnown RBP5.93□□□□□ -1.46
KCNMA1-216ENST00000457953 LPAP08519 4548 aa5.91□□□□□ -1.46
KCNMA1-216ENST00000457953 PCLOQ9Y6V0 5065 aa5.83□□□□□ -1.48
KCNMA1-216ENST00000457953 MUC17Q685J3 4493 aa5.77□□□□□ -1.49
KCNMA1-216ENST00000457953 LCE3AQ5TA76 89 aa5.76□□□□□ -1.49
KCNMA1-216ENST00000457953 ABCA13Q86UQ4 5058 aa5.75□□□□□ -1.49
KCNMA1-216ENST00000457953 CRCT1Q9UGL9 99 aa5.74□□□□□ -1.49
KCNMA1-216ENST00000457953 KRTAP10-12P60413 245 aa5.72□□□□□ -1.49
KCNMA1-216ENST00000457953 MUC2Q02817 5179 aa5.7□□□□□ -1.5
KCNMA1-216ENST00000457953 KRTAP12-3P60328 96 aa5.7□□□□□ -1.5
KCNMA1-216ENST00000457953 KRTAP19-2Q3LHN2 52 aa5.69□□□□□ -1.5
KCNMA1-216ENST00000457953 INE1O15225 51 aa5.69□□□□□ -1.5
KCNMA1-216ENST00000457953 RNF213Q63HN8 5207 aa5.65□□□□□ -1.5
KCNMA1-216ENST00000457953 HERC1Q15751 4861 aa5.64□□□□□ -1.51
KCNMA1-216ENST00000457953 BIRC6Q9NR09 4857 aa5.62□□□□□ -1.51
KCNMA1-216ENST00000457953 SPRR5A0A1B0GTR4 108 aa5.6□□□□□ -1.51
KCNMA1-216ENST00000457953 MT1HP80294 61 aa5.58□□□□□ -1.52
KCNMA1-216ENST00000457953 FSIP2Q5CZC0 6907 aa5.57□□□□□ -1.52
KCNMA1-216ENST00000457953 FAT4Q6V0I7 4981 aa5.53□□□□□ -1.52
KCNMA1-216ENST00000457953 FLGP20930 4061 aaPredicted RBP5.51□□□□□ -1.53
KCNMA1-216ENST00000457953 MT2AP02795 61 aa5.5□□□□□ -1.53
KCNMA1-216ENST00000457953 MT1FP04733 61 aa5.49□□□□□ -1.53
KCNMA1-216ENST00000457953 UBR4Q5T4S7 5183 aa5.47□□□□□ -1.53
KCNMA1-216ENST00000457953 KRTAP23-1A1A580 65 aa5.47□□□□□ -1.53
KCNMA1-216ENST00000457953 SYNE1Q8NF91 8797 aaKnown RBP5.45□□□□□ -1.54
KCNMA1-216ENST00000457953 OBSCNQ5VST9 7968 aa5.38□□□□□ -1.55
KCNMA1-216ENST00000457953 KRTAP10-5P60370 271 aa5.35□□□□□ -1.55
KCNMA1-216ENST00000457953 SPRR2GQ9BYE4 73 aa5.33□□□□□ -1.56
KCNMA1-216ENST00000457953 LCE2CQ5TA81 110 aa5.31□□□□□ -1.56
KCNMA1-216ENST00000457953 KRTAP19-1Q8IUB9 90 aa5.31□□□□□ -1.56
KCNMA1-216ENST00000457953 HMCN2Q8NDA2 5059 aa5.23□□□□□ -1.57
KCNMA1-216ENST00000457953 KRTAP9-8Q9BYQ0 159 aa5.17□□□□□ -1.58
KCNMA1-216ENST00000457953 KRTAP8-1Q8IUC2 63 aa5.12□□□□□ -1.59
KCNMA1-216ENST00000457953 KRTAP10-7P60409 375 aaPredicted RBP5.11□□□□□ -1.59
KCNMA1-216ENST00000457953 KRTAP19-5Q3LI72 72 aa5.1□□□□□ -1.59
KCNMA1-216ENST00000457953 KRTAP19-8Q3LI54 63 aa5.1□□□□□ -1.59
KCNMA1-216ENST00000457953 MT1BP07438 61 aa5.06□□□□□ -1.6
KCNMA1-216ENST00000457953 MT1XP80297 61 aa5.03□□□□□ -1.6
KCNMA1-216ENST00000457953 KRTAP4-8A0A0G2JLE6 195 aa5.01□□□□□ -1.61
KCNMA1-216ENST00000457953 KRTAP4-8Q9BYQ9 185 aa5.01□□□□□ -1.61
KCNMA1-216ENST00000457953 LCE3CQ5T5A8 94 aa4.99□□□□□ -1.61
KCNMA1-216ENST00000457953 USH2AO75445 5202 aa4.99□□□□□ -1.61
KCNMA1-216ENST00000457953 KRTAP9-3Q9BYQ3 159 aa4.96□□□□□ -1.62
KCNMA1-216ENST00000457953 LCE2BO14633 110 aa4.9□□□□□ -1.62
KCNMA1-216ENST00000457953 SPRR2FQ96RM1 72 aa4.85□□□□□ -1.63
KCNMA1-216ENST00000457953 DSTQ03001 7570 aaKnown RBP4.82□□□□□ -1.64
KCNMA1-216ENST00000457953 KMT2DO14686 5537 aa4.79□□□□□ -1.64
KCNMA1-216ENST00000457953 KRTAP12-4P60329 112 aa4.76□□□□□ -1.65
KCNMA1-216ENST00000457953 KRTAP4-7Q9BYR0 210 aa4.74□□□□□ -1.65
KCNMA1-216ENST00000457953 LCE3BQ5TA77 95 aa4.7□□□□□ -1.66
KCNMA1-216ENST00000457953 FCGBPQ9Y6R7 5405 aaPredicted RBP4.7□□□□□ -1.66
KCNMA1-216ENST00000457953 MT1GP13640 62 aa4.68□□□□□ -1.66
KCNMA1-216ENST00000457953 LCE2AQ5TA79 106 aaPredicted RBP4.61□□□□□ -1.67
KCNMA1-216ENST00000457953 KRTAP9-6A8MVA2 160 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms