RNA–Protein interactions for RNA: ENST00000455394.5

KIF3C-204, Transcript of kinesin family member 3C, humanhuman

TSL 1 (best)

Gene KIF3C, Length 5,462 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIF3C-204ENST00000455394 DNAH5Q8TE73 4624 aa6.4□□□□□ -1.38
KIF3C-204ENST00000455394 TRRAPQ9Y4A5 3859 aa6.4□□□□□ -1.39
KIF3C-204ENST00000455394 COL7A1Q02388 2944 aa6.4□□□□□ -1.39
KIF3C-204ENST00000455394 DYNC2H1Q8NCM8 4307 aaKnown RBP6.39□□□□□ -1.39
KIF3C-204ENST00000455394 LORP23490 312 aaPredicted RBP6.36□□□□□ -1.39
KIF3C-204ENST00000455394 DYNC1H1Q14204 4646 aaKnown RBP6.36□□□□□ -1.39
KIF3C-204ENST00000455394 PLECQ15149 4684 aaKnown RBP6.36□□□□□ -1.39
KIF3C-204ENST00000455394 BIRC6Q9NR09 4857 aa6.36□□□□□ -1.39
KIF3C-204ENST00000455394 KRTAP17-1Q9BYP8 105 aa6.35□□□□□ -1.39
KIF3C-204ENST00000455394 DNAH2Q9P225 4427 aa6.35□□□□□ -1.39
KIF3C-204ENST00000455394 VPS13CQ709C8 3753 aa6.35□□□□□ -1.39
KIF3C-204ENST00000455394 ANK2Q01484 3957 aa6.3□□□□□ -1.4
KIF3C-204ENST00000455394 CRCT1Q9UGL9 99 aa6.29□□□□□ -1.4
KIF3C-204ENST00000455394 VPS13DQ5THJ4 4388 aa6.28□□□□□ -1.4
KIF3C-204ENST00000455394 DNAH6Q9C0G6 4158 aa6.28□□□□□ -1.4
KIF3C-204ENST00000455394 SRRM2Q9UQ35 2752 aaKnown RBP6.26□□□□□ -1.41
KIF3C-204ENST00000455394 LRP1BQ9NZR2 4599 aa6.26□□□□□ -1.41
KIF3C-204ENST00000455394 MT2AP02795 61 aa6.25□□□□□ -1.41
KIF3C-204ENST00000455394 KRTAP4-1Q9BYQ7 146 aa6.22□□□□□ -1.41
KIF3C-204ENST00000455394 HERC1Q15751 4861 aa6.21□□□□□ -1.41
KIF3C-204ENST00000455394 FAT2Q9NYQ8 4349 aa6.2□□□□□ -1.42
KIF3C-204ENST00000455394 KRTAP12-3P60328 96 aa6.19□□□□□ -1.42
KIF3C-204ENST00000455394 KRTAP3-3Q9BYR6 98 aa6.17□□□□□ -1.42
KIF3C-204ENST00000455394 DNAH17Q9UFH2 4485 aa6.15□□□□□ -1.42
KIF3C-204ENST00000455394 RYR1P21817 5038 aa6.15□□□□□ -1.42
KIF3C-204ENST00000455394 KRTAP3-2Q9BYR7 98 aa6.15□□□□□ -1.42
KIF3C-204ENST00000455394 DNAH3Q8TD57 4116 aa6.13□□□□□ -1.43
KIF3C-204ENST00000455394 ZNF469Q96JG9 3925 aaPredicted RBP6.09□□□□□ -1.44
KIF3C-204ENST00000455394 SPRR2GQ9BYE4 73 aa6.05□□□□□ -1.44
KIF3C-204ENST00000455394 SPRR2FQ96RM1 72 aa6.04□□□□□ -1.44
KIF3C-204ENST00000455394 MT1FP04733 61 aa6.03□□□□□ -1.44
KIF3C-204ENST00000455394 RYR3Q15413 4870 aa6.02□□□□□ -1.45
KIF3C-204ENST00000455394 DNAH8Q96JB1 4490 aa6.02□□□□□ -1.45
KIF3C-204ENST00000455394 LCE3AQ5TA76 89 aa6.01□□□□□ -1.45
KIF3C-204ENST00000455394 RYR2Q92736 4967 aa6.01□□□□□ -1.45
KIF3C-204ENST00000455394 KRTAP10-5P60370 271 aa5.99□□□□□ -1.45
KIF3C-204ENST00000455394 PRKDCP78527 4128 aaKnown RBP5.94□□□□□ -1.46
KIF3C-204ENST00000455394 MYCBP2O75592 4640 aa5.93□□□□□ -1.46
KIF3C-204ENST00000455394 SACSQ9NZJ4 4579 aa5.92□□□□□ -1.46
KIF3C-204ENST00000455394 HERC2O95714 4834 aa5.92□□□□□ -1.46
KIF3C-204ENST00000455394 SPRR2EP22531 72 aa5.92□□□□□ -1.46
KIF3C-204ENST00000455394 SPRR2BP35325 72 aa5.92□□□□□ -1.46
KIF3C-204ENST00000455394 SPRR2AP35326 72 aa5.92□□□□□ -1.46
KIF3C-204ENST00000455394 STARD9Q9P2P6 4700 aa5.92□□□□□ -1.46
KIF3C-204ENST00000455394 KRTAP10-7P60409 375 aaPredicted RBP5.91□□□□□ -1.46
KIF3C-204ENST00000455394 HSPG2P98160 4391 aa5.89□□□□□ -1.47
KIF3C-204ENST00000455394 KRTAP19-4Q3LI73 84 aa5.89□□□□□ -1.47
KIF3C-204ENST00000455394 KRTAP9-2Q9BYQ4 174 aa5.89□□□□□ -1.47
KIF3C-204ENST00000455394 PKHD1L1Q86WI1 4243 aa5.88□□□□□ -1.47
KIF3C-204ENST00000455394 KRTAP9-6A0A140TA67 174 aa5.87□□□□□ -1.47
KIF3C-204ENST00000455394 LCE2DQ5TA82 110 aaPredicted RBP5.85□□□□□ -1.47
KIF3C-204ENST00000455394 PCLOQ9Y6V0 5065 aa5.85□□□□□ -1.47
KIF3C-204ENST00000455394 FAT1Q14517 4588 aa5.85□□□□□ -1.47
KIF3C-204ENST00000455394 APOBP04114 4563 aaKnown RBP5.82□□□□□ -1.48
KIF3C-204ENST00000455394 FAT3Q8TDW7 4589 aa5.8□□□□□ -1.48
KIF3C-204ENST00000455394 SPRR2DP22532 72 aa5.78□□□□□ -1.48
KIF3C-204ENST00000455394 CSMD3Q7Z407 3707 aa5.78□□□□□ -1.48
KIF3C-204ENST00000455394 KRTAP19-8Q3LI54 63 aa5.77□□□□□ -1.49
KIF3C-204ENST00000455394 DNAH7Q8WXX0 4024 aa5.75□□□□□ -1.49
KIF3C-204ENST00000455394 KRTAP19-1Q8IUB9 90 aa5.73□□□□□ -1.49
KIF3C-204ENST00000455394 KIAA1109Q2LD37 5005 aa5.7□□□□□ -1.5
KIF3C-204ENST00000455394 LCE2BO14633 110 aa5.66□□□□□ -1.5
KIF3C-204ENST00000455394 CMYA5Q8N3K9 4069 aa5.63□□□□□ -1.51
KIF3C-204ENST00000455394 KRTAP9-8Q9BYQ0 159 aa5.62□□□□□ -1.51
KIF3C-204ENST00000455394 LCE2CQ5TA81 110 aa5.59□□□□□ -1.51
KIF3C-204ENST00000455394 KRTAP9-3Q9BYQ3 159 aa5.57□□□□□ -1.52
KIF3C-204ENST00000455394 LRP1Q07954 4544 aaKnown RBP5.57□□□□□ -1.52
KIF3C-204ENST00000455394 FRAS1Q86XX4 4008 aa5.5□□□□□ -1.53
KIF3C-204ENST00000455394 VPS13BQ7Z7G8 4022 aa5.5□□□□□ -1.53
KIF3C-204ENST00000455394 KMT2CQ8NEZ4 4911 aaKnown RBP5.49□□□□□ -1.53
KIF3C-204ENST00000455394 KRTAP19-5Q3LI72 72 aa5.48□□□□□ -1.53
KIF3C-204ENST00000455394 KRTAP19-6Q3LI70 58 aa5.46□□□□□ -1.54
KIF3C-204ENST00000455394 LCE2AQ5TA79 106 aaPredicted RBP5.45□□□□□ -1.54
KIF3C-204ENST00000455394 PKD1P98161 4303 aa5.44□□□□□ -1.54
KIF3C-204ENST00000455394 KRTAP12-4P60329 112 aa5.44□□□□□ -1.54
KIF3C-204ENST00000455394 MT1BP07438 61 aa5.42□□□□□ -1.54
KIF3C-204ENST00000455394 KMT2AQ03164 3969 aa5.41□□□□□ -1.54
KIF3C-204ENST00000455394 KRTAP9-7A8MTY7 169 aa5.37□□□□□ -1.55
KIF3C-204ENST00000455394 MT1GP13640 62 aa5.36□□□□□ -1.55
KIF3C-204ENST00000455394 KRTAP20-1Q3LI63 56 aa5.36□□□□□ -1.55
KIF3C-204ENST00000455394 LCE3CQ5T5A8 94 aa5.34□□□□□ -1.55
KIF3C-204ENST00000455394 MUC17Q685J3 4493 aa5.33□□□□□ -1.56
KIF3C-204ENST00000455394 MT1XP80297 61 aa5.32□□□□□ -1.56
KIF3C-204ENST00000455394 ABCA13Q86UQ4 5058 aa5.29□□□□□ -1.56
KIF3C-204ENST00000455394 KRTAP6-3Q3LI67 103 aa5.26□□□□□ -1.57
KIF3C-204ENST00000455394 LYSTQ99698 3801 aa5.26□□□□□ -1.57
KIF3C-204ENST00000455394 KRTAP19-2Q3LHN2 52 aa5.25□□□□□ -1.57
KIF3C-204ENST00000455394 HECTD4Q9Y4D8 3996 aa5.23□□□□□ -1.57
KIF3C-204ENST00000455394 PKHD1P08F94 4074 aa5.23□□□□□ -1.57
KIF3C-204ENST00000455394 LCE3BQ5TA77 95 aa5.18□□□□□ -1.58
KIF3C-204ENST00000455394 HYDINQ4G0P3 5121 aa5.17□□□□□ -1.58
KIF3C-204ENST00000455394 LRP2P98164 4655 aa5.16□□□□□ -1.58
KIF3C-204ENST00000455394 KRTAP19-3Q7Z4W3 81 aa5.14□□□□□ -1.59
KIF3C-204ENST00000455394 KRTAP2-3P0C7H8 128 aa5.13□□□□□ -1.59
KIF3C-204ENST00000455394 KRTAP2-4Q9BYR9 128 aa5.13□□□□□ -1.59
KIF3C-204ENST00000455394 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.12□□□□□ -1.59
KIF3C-204ENST00000455394 EPPK1P58107 5090 aaKnown RBP5.09□□□□□ -1.59
KIF3C-204ENST00000455394 LCE1AQ5T7P2 110 aa4.98□□□□□ -1.61
KIF3C-204ENST00000455394 KRTAP4-8A0A0G2JLE6 195 aa4.97□□□□□ -1.61
KIF3C-204ENST00000455394 KRTAP4-8Q9BYQ9 185 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms