RNA–Protein interactions for RNA: ENST00000454516.6

CNOT10-206, Transcript of CCR4-NOT transcription complex subunit 10, humanhuman

TSL 2 BASIC

Gene CNOT10, Length 2,760 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT10-206ENST00000454516 NBDYA0A0U1RRE5 68 aa2.33□□□□□ -2.04
CNOT10-206ENST00000454516 LRP1BQ9NZR2 4599 aa2.33□□□□□ -2.04
CNOT10-206ENST00000454516 GVQW2A0A096LPI5 108 aaPredicted RBP2.33□□□□□ -2.04
CNOT10-206ENST00000454516 MMP24-AS1A0A0U1RRL7 71 aa2.33□□□□□ -2.04
CNOT10-206ENST00000454516 UQCR11O14957 56 aa2.33□□□□□ -2.04
CNOT10-206ENST00000454516 KRTAP9-3Q9BYQ3 159 aa2.33□□□□□ -2.04
CNOT10-206ENST00000454516 KRTAP10-2P60368 255 aa2.32□□□□□ -2.04
CNOT10-206ENST00000454516 SMR3BP02814 79 aaPredicted RBP2.32□□□□□ -2.04
CNOT10-206ENST00000454516 PRLHP81277 87 aa2.32□□□□□ -2.04
CNOT10-206ENST00000454516 DYNC1H1Q14204 4646 aaKnown RBP2.32□□□□□ -2.04
CNOT10-206ENST00000454516 KRTAP11-1Q8IUC1 163 aa2.32□□□□□ -2.04
CNOT10-206ENST00000454516 TYMSOSQ8TAI1 123 aa2.32□□□□□ -2.04
CNOT10-206ENST00000454516 ANAPC11Q9NYG5 84 aa2.32□□□□□ -2.04
CNOT10-206ENST00000454516 DMBT1Q9UGM3 2413 aaPredicted RBP2.31□□□□□ -2.04
CNOT10-206ENST00000454516 LCE5AQ5TCM9 118 aa2.31□□□□□ -2.04
CNOT10-206ENST00000454516 SPINT4Q6UDR6 99 aa2.31□□□□□ -2.04
CNOT10-206ENST00000454516 SSBP3-AS1Q7Z2R9 100 aa2.31□□□□□ -2.04
CNOT10-206ENST00000454516 VPS13BQ7Z7G8 4022 aa2.31□□□□□ -2.04
CNOT10-206ENST00000454516 ALMS1Q8TCU4 4167 aa2.31□□□□□ -2.04
CNOT10-206ENST00000454516 MUC2Q02817 5179 aa2.31□□□□□ -2.04
CNOT10-206ENST00000454516 PKD1P98161 4303 aa2.3□□□□□ -2.04
CNOT10-206ENST00000454516 KRTAP7-1Q8IUC3 87 aa2.3□□□□□ -2.04
CNOT10-206ENST00000454516 LINC00472Q9H8W2 130 aa2.3□□□□□ -2.04
CNOT10-206ENST00000454516 MYCBP2O75592 4640 aa2.3□□□□□ -2.04
CNOT10-206ENST00000454516 Q6ZRN7 208 aaPredicted RBP2.29□□□□□ -2.04
CNOT10-206ENST00000454516 LINC00304Q8N9R0 145 aa2.29□□□□□ -2.04
CNOT10-206ENST00000454516 DMAC1Q96GE9 116 aa2.29□□□□□ -2.04
CNOT10-206ENST00000454516 APOBP04114 4563 aaKnown RBP2.29□□□□□ -2.04
CNOT10-206ENST00000454516 A0A087WTM6 91 aa2.29□□□□□ -2.04
CNOT10-206ENST00000454516 SPINK1P00995 79 aa2.29□□□□□ -2.04
CNOT10-206ENST00000454516 ACYP2P14621 99 aa2.29□□□□□ -2.04
CNOT10-206ENST00000454516 LRP1Q07954 4544 aaKnown RBP2.28□□□□□ -2.04
CNOT10-206ENST00000454516 KRTAP10-1P60331 282 aa2.27□□□□□ -2.05
CNOT10-206ENST00000454516 C14orf177Q52M58 125 aa2.27□□□□□ -2.05
CNOT10-206ENST00000454516 FAT3Q8TDW7 4589 aa2.26□□□□□ -2.05
CNOT10-206ENST00000454516 KRTAP15-1Q3LI76 137 aa2.26□□□□□ -2.05
CNOT10-206ENST00000454516 TP53AIP1Q9HCN2 124 aa2.26□□□□□ -2.05
CNOT10-206ENST00000454516 SPRR1AP35321 89 aa2.25□□□□□ -2.05
CNOT10-206ENST00000454516 SPINK6Q6UWN8 80 aa2.24□□□□□ -2.05
CNOT10-206ENST00000454516 MRPL34Q9BQ48 92 aaKnown RBP2.24□□□□□ -2.05
CNOT10-206ENST00000454516 H0YAA0 97 aa2.23□□□□□ -2.05
CNOT10-206ENST00000454516 C10orf95Q9H7T3 257 aa2.23□□□□□ -2.05
CNOT10-206ENST00000454516 Q96NJ1 140 aa2.23□□□□□ -2.05
CNOT10-206ENST00000454516 PSORS1C2Q9UIG4 136 aa2.23□□□□□ -2.05
CNOT10-206ENST00000454516 FAT4Q6V0I7 4981 aa2.22□□□□□ -2.05
CNOT10-206ENST00000454516 PRO2289Q9P1D8 64 aa2.22□□□□□ -2.05
CNOT10-206ENST00000454516 HSPG2P98160 4391 aa2.22□□□□□ -2.05
CNOT10-206ENST00000454516 CRCT1Q9UGL9 99 aa2.21□□□□□ -2.05
CNOT10-206ENST00000454516 Q6ZSA8 131 aa2.21□□□□□ -2.06
CNOT10-206ENST00000454516 SPACA4Q8TDM5 124 aa2.21□□□□□ -2.06
CNOT10-206ENST00000454516 R4GN34 69 aa2.21□□□□□ -2.06
CNOT10-206ENST00000454516 TPRXLQ17RH7 258 aa2.21□□□□□ -2.06
CNOT10-206ENST00000454516 IGKV2D-30A0A075B6S6 120 aa2.2□□□□□ -2.06
CNOT10-206ENST00000454516 IGKV2-30P06310 120 aa2.2□□□□□ -2.06
CNOT10-206ENST00000454516 KRTAP13-3Q3SY46 172 aa2.19□□□□□ -2.06
CNOT10-206ENST00000454516 KRTAP13-1Q8IUC0 172 aa2.18□□□□□ -2.06
CNOT10-206ENST00000454516 A0A1B0GVY2 172 aa2.16□□□□□ -2.06
CNOT10-206ENST00000454516 HMCN2Q8NDA2 5059 aa2.16□□□□□ -2.06
CNOT10-206ENST00000454516 RNF213Q63HN8 5207 aa2.15□□□□□ -2.06
CNOT10-206ENST00000454516 PKHD1L1Q86WI1 4243 aa2.15□□□□□ -2.06
CNOT10-206ENST00000454516 SPRR1BP22528 89 aa2.15□□□□□ -2.07
CNOT10-206ENST00000454516 LPAP08519 4548 aa2.15□□□□□ -2.07
CNOT10-206ENST00000454516 A0A0D9SG42 100 aa2.14□□□□□ -2.07
CNOT10-206ENST00000454516 LRP2P98164 4655 aa2.14□□□□□ -2.07
CNOT10-206ENST00000454516 H1FX-AS1Q4G0G2 97 aa2.12□□□□□ -2.07
CNOT10-206ENST00000454516 KRTAP13-2Q52LG2 175 aa2.12□□□□□ -2.07
CNOT10-206ENST00000454516 Q5VSD8 79 aa2.12□□□□□ -2.07
CNOT10-206ENST00000454516 C9orf92A6NGG3 77 aa2.1□□□□□ -2.07
CNOT10-206ENST00000454516 KRTAP10-4P60372 401 aaPredicted RBP2.09□□□□□ -2.07
CNOT10-206ENST00000454516 KRTAP1-4P0C5Y4 121 aa2.09□□□□□ -2.08
CNOT10-206ENST00000454516 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.09□□□□□ -2.08
CNOT10-206ENST00000454516 TNXBP22105 4242 aa2.09□□□□□ -2.08
CNOT10-206ENST00000454516 COX6B2Q6YFQ2 88 aa2.08□□□□□ -2.08
CNOT10-206ENST00000454516 FSIP2Q5CZC0 6907 aa2.07□□□□□ -2.08
CNOT10-206ENST00000454516 GPR98Q8WXG9 6306 aa2.07□□□□□ -2.08
CNOT10-206ENST00000454516 KRTAP13-4Q3LI77 160 aa2.05□□□□□ -2.08
CNOT10-206ENST00000454516 RPL37P61927 97 aaKnown RBP2.05□□□□□ -2.08
CNOT10-206ENST00000454516 KRTAP10-8P60410 259 aa2.04□□□□□ -2.08
CNOT10-206ENST00000454516 INE1O15225 51 aa2.02□□□□□ -2.09
CNOT10-206ENST00000454516 RPS29P62273 56 aaKnown RBP2.02□□□□□ -2.09
CNOT10-206ENST00000454516 KRTAP12-2P59991 146 aa2□□□□□ -2.09
CNOT10-206ENST00000454516 SSPOA2VEC9 5147 aa2□□□□□ -2.09
CNOT10-206ENST00000454516 S4R3F8 94 aa2□□□□□ -2.09
CNOT10-206ENST00000454516 MT1HL1P0DM35 61 aa1.99□□□□□ -2.09
CNOT10-206ENST00000454516 MUC5BQ9HC84 5762 aaPredicted RBP1.99□□□□□ -2.09
CNOT10-206ENST00000454516 NEBP20929 6669 aa1.99□□□□□ -2.09
CNOT10-206ENST00000454516 KRTAP5-9P26371 169 aa1.99□□□□□ -2.09
CNOT10-206ENST00000454516 PLAC4Q8WY50 150 aa1.99□□□□□ -2.09
CNOT10-206ENST00000454516 KRTAP10-6P60371 365 aaPredicted RBP1.97□□□□□ -2.09
CNOT10-206ENST00000454516 KRTAP12-1P59990 96 aa1.93□□□□□ -2.1
CNOT10-206ENST00000454516 KRTAP20-1Q3LI63 56 aa1.93□□□□□ -2.1
CNOT10-206ENST00000454516 SYNE2Q8WXH0 6885 aaKnown RBP1.92□□□□□ -2.1
CNOT10-206ENST00000454516 KRTAP4-1Q9BYQ7 146 aa1.89□□□□□ -2.11
CNOT10-206ENST00000454516 MUC17Q685J3 4493 aa1.86□□□□□ -2.11
CNOT10-206ENST00000454516 KRTAP2-2Q9BYT5 123 aa1.86□□□□□ -2.11
CNOT10-206ENST00000454516 PP632Q6XCG6 107 aa1.86□□□□□ -2.11
CNOT10-206ENST00000454516 USH2AO75445 5202 aa1.85□□□□□ -2.11
CNOT10-206ENST00000454516 KRTAP6-3Q3LI67 103 aa1.81□□□□□ -2.12
CNOT10-206ENST00000454516 LCE1AQ5T7P2 110 aa1.81□□□□□ -2.12
CNOT10-206ENST00000454516 KRTAP5-4Q6L8H1 288 aa1.81□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms