RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 SMIM5Q71RC9 77 aa-0.87□□□□□ -2.55
HMGN3P1-201ENST00000453847 PLECQ15149 4684 aaKnown RBP-0.87□□□□□ -2.55
HMGN3P1-201ENST00000453847 LMO7Q8WWI1 1683 aa-0.88□□□□□ -2.55
HMGN3P1-201ENST00000453847 USP9YO00507 2555 aaPredicted RBP-0.88□□□□□ -2.55
HMGN3P1-201ENST00000453847 TLN2Q9Y4G6 2542 aa-0.88□□□□□ -2.55
HMGN3P1-201ENST00000453847 KIF21BO75037 1637 aa-0.89□□□□□ -2.55
HMGN3P1-201ENST00000453847 MT4P47944 62 aa-0.89□□□□□ -2.55
HMGN3P1-201ENST00000453847 KAAG1Q9UBP8 84 aa-0.9□□□□□ -2.55
HMGN3P1-201ENST00000453847 RYR1P21817 5038 aa-0.91□□□□□ -2.55
HMGN3P1-201ENST00000453847 EPPK1P58107 5090 aaKnown RBP-0.91□□□□□ -2.56
HMGN3P1-201ENST00000453847 CELSR3Q9NYQ7 3312 aa-0.92□□□□□ -2.56
HMGN3P1-201ENST00000453847 SYCP2Q9BX26 1530 aa-0.92□□□□□ -2.56
HMGN3P1-201ENST00000453847 SMR3BP02814 79 aaPredicted RBP-0.93□□□□□ -2.56
HMGN3P1-201ENST00000453847 NRXN3Q9Y4C0 1643 aa-0.93□□□□□ -2.56
HMGN3P1-201ENST00000453847 CMYA5Q8N3K9 4069 aa-0.94□□□□□ -2.56
HMGN3P1-201ENST00000453847 M0QY20 66 aa-0.94□□□□□ -2.56
HMGN3P1-201ENST00000453847 KRTAP8-1Q8IUC2 63 aa-0.94□□□□□ -2.56
HMGN3P1-201ENST00000453847 PREX2Q70Z35 1606 aa-0.95□□□□□ -2.56
HMGN3P1-201ENST00000453847 USP9XQ93008 2570 aaPredicted RBP-0.96□□□□□ -2.56
HMGN3P1-201ENST00000453847 ABRACLQ9P1F3 81 aa-0.96□□□□□ -2.56
HMGN3P1-201ENST00000453847 H0YGX0 51 aa-0.97□□□□□ -2.56
HMGN3P1-201ENST00000453847 MT1HP80294 61 aa-0.97□□□□□ -2.56
HMGN3P1-201ENST00000453847 C5orf42Q9H799 3197 aa-0.98□□□□□ -2.57
HMGN3P1-201ENST00000453847 ABCA5Q8WWZ7 1642 aa-0.99□□□□□ -2.57
HMGN3P1-201ENST00000453847 SMIM27A0A1W2PRY6 76 aa-0.99□□□□□ -2.57
HMGN3P1-201ENST00000453847 DEFB1P60022 68 aa-0.99□□□□□ -2.57
HMGN3P1-201ENST00000453847 CLPSL2Q6UWE3 100 aa-0.99□□□□□ -2.57
HMGN3P1-201ENST00000453847 WFDC10BQ8IUB3 73 aa-0.99□□□□□ -2.57
HMGN3P1-201ENST00000453847 FRYQ5TBA9 3013 aa-0.99□□□□□ -2.57
HMGN3P1-201ENST00000453847 LAMA3Q16787 3333 aa-0.99□□□□□ -2.57
HMGN3P1-201ENST00000453847 ADCY10Q96PN6 1610 aa-1□□□□□ -2.57
HMGN3P1-201ENST00000453847 COL6A5A8TX70 2615 aa-1.01□□□□□ -2.57
HMGN3P1-201ENST00000453847 IQGAP1P46940 1657 aa-1.01□□□□□ -2.57
HMGN3P1-201ENST00000453847 M0QZ58 72 aa-1.03□□□□□ -2.57
HMGN3P1-201ENST00000453847 DNAH10Q8IVF4 4471 aa-1.03□□□□□ -2.57
HMGN3P1-201ENST00000453847 DYNC1H1Q14204 4646 aaKnown RBP-1.04□□□□□ -2.58
HMGN3P1-201ENST00000453847 TEX15Q9BXT5 2789 aa-1.04□□□□□ -2.58
HMGN3P1-201ENST00000453847 A8MTW9 85 aa-1.04□□□□□ -2.58
HMGN3P1-201ENST00000453847 DNAH17Q9UFH2 4485 aa-1.04□□□□□ -2.58
HMGN3P1-201ENST00000453847 DNHD1Q96M86 4753 aa-1.04□□□□□ -2.58
HMGN3P1-201ENST00000453847 ITPR1Q14643 2758 aa-1.05□□□□□ -2.58
HMGN3P1-201ENST00000453847 PLNP26678 52 aa-1.06□□□□□ -2.58
HMGN3P1-201ENST00000453847 ABCC8Q09428 1581 aa-1.06□□□□□ -2.58
HMGN3P1-201ENST00000453847 TFF3Q07654 80 aa-1.07□□□□□ -2.58
HMGN3P1-201ENST00000453847 FANCD2Q9BXW9 1451 aa-1.07□□□□□ -2.58
HMGN3P1-201ENST00000453847 DDX60Q8IY21 1712 aaKnown RBP-1.08□□□□□ -2.58
HMGN3P1-201ENST00000453847 BIRC6Q9NR09 4857 aa-1.09□□□□□ -2.58
HMGN3P1-201ENST00000453847 RNF213Q63HN8 5207 aa-1.11□□□□□ -2.59
HMGN3P1-201ENST00000453847 MGAQ8IWI9 3026 aa-1.11□□□□□ -2.59
HMGN3P1-201ENST00000453847 SRCAPQ6ZRS2 3230 aa-1.11□□□□□ -2.59
HMGN3P1-201ENST00000453847 NFAT5O94916 1531 aa-1.12□□□□□ -2.59
HMGN3P1-201ENST00000453847 ADGRG4Q8IZF6 3080 aa-1.12□□□□□ -2.59
HMGN3P1-201ENST00000453847 CHD7Q9P2D1 2997 aa-1.14□□□□□ -2.59
HMGN3P1-201ENST00000453847 CSMD1Q96PZ7 3565 aa-1.14□□□□□ -2.59
HMGN3P1-201ENST00000453847 NEBP20929 6669 aa-1.16□□□□□ -2.6
HMGN3P1-201ENST00000453847 SPTAN1Q13813 2472 aaKnown RBP-1.16□□□□□ -2.6
HMGN3P1-201ENST00000453847 CMC2Q9NRP2 79 aa-1.17□□□□□ -2.6
HMGN3P1-201ENST00000453847 HYDINQ4G0P3 5121 aa-1.2□□□□□ -2.6
HMGN3P1-201ENST00000453847 LAMA2P24043 3122 aaKnown RBP-1.21□□□□□ -2.6
HMGN3P1-201ENST00000453847 DEFB131AP59861 70 aa-1.21□□□□□ -2.6
HMGN3P1-201ENST00000453847 MT1XP80297 61 aa-1.21□□□□□ -2.6
HMGN3P1-201ENST00000453847 LINC01546A6NGU7 62 aa-1.22□□□□□ -2.6
HMGN3P1-201ENST00000453847 MT1EP04732 61 aa-1.22□□□□□ -2.6
HMGN3P1-201ENST00000453847 SMIM2Q9BVW6 85 aa-1.23□□□□□ -2.61
HMGN3P1-201ENST00000453847 NIPBLQ6KC79 2804 aaeCLIP-1.23□□□□□ -2.61
HMGN3P1-201ENST00000453847 LRBAP50851 2863 aa-1.25□□□□□ -2.61
HMGN3P1-201ENST00000453847 TRRAPQ9Y4A5 3859 aa-1.25□□□□□ -2.61
HMGN3P1-201ENST00000453847 POLR2KP53803 58 aaKnown RBP-1.25□□□□□ -2.61
HMGN3P1-201ENST00000453847 CLTCL1P53675 1640 aa-1.26□□□□□ -2.61
HMGN3P1-201ENST00000453847 SPART-AS1P0CW21 52 aa-1.26□□□□□ -2.61
HMGN3P1-201ENST00000453847 ZFHX4Q86UP3 3567 aa-1.26□□□□□ -2.61
HMGN3P1-201ENST00000453847 DOPEY1Q5JWR5 2465 aa-1.28□□□□□ -2.61
HMGN3P1-201ENST00000453847 TRPM2O94759 1503 aa-1.3□□□□□ -2.62
HMGN3P1-201ENST00000453847 RYR2Q92736 4967 aa-1.3□□□□□ -2.62
HMGN3P1-201ENST00000453847 EYSQ5T1H1 3165 aa-1.3□□□□□ -2.62
HMGN3P1-201ENST00000453847 MYO9AB2RTY4 2548 aa-1.31□□□□□ -2.62
HMGN3P1-201ENST00000453847 MT1LQ93083 61 aa-1.31□□□□□ -2.62
HMGN3P1-201ENST00000453847 DNAH5Q8TE73 4624 aa-1.31□□□□□ -2.62
HMGN3P1-201ENST00000453847 CRYBG3Q68DQ2 2970 aa-1.32□□□□□ -2.62
HMGN3P1-201ENST00000453847 RYR3Q15413 4870 aa-1.36□□□□□ -2.63
HMGN3P1-201ENST00000453847 SNRPGP15A8MWD9 76 aa-1.37□□□□□ -2.63
HMGN3P1-201ENST00000453847 CFAP46Q8IYW2 2715 aa-1.38□□□□□ -2.63
HMGN3P1-201ENST00000453847 KIAA1109Q2LD37 5005 aa-1.4□□□□□ -2.63
HMGN3P1-201ENST00000453847 NDUFA1O15239 70 aa-1.4□□□□□ -2.63
HMGN3P1-201ENST00000453847 DMXL2Q8TDJ6 3036 aa-1.43□□□□□ -2.64
HMGN3P1-201ENST00000453847 LEAP2Q969E1 77 aa-1.45□□□□□ -2.64
HMGN3P1-201ENST00000453847 CSMD2Q7Z408 3487 aa-1.46□□□□□ -2.64
HMGN3P1-201ENST00000453847 MT1GP13640 62 aa-1.48□□□□□ -2.65
HMGN3P1-201ENST00000453847 SMG1Q96Q15 3661 aaKnown RBP-1.49□□□□□ -2.65
HMGN3P1-201ENST00000453847 IQGAP2Q13576 1575 aa-1.49□□□□□ -2.65
HMGN3P1-201ENST00000453847 CEP295Q9C0D2 2601 aa-1.49□□□□□ -2.65
HMGN3P1-201ENST00000453847 MT1HL1P0DM35 61 aa-1.56□□□□□ -2.66
HMGN3P1-201ENST00000453847 VPS13CQ709C8 3753 aa-1.57□□□□□ -2.66
HMGN3P1-201ENST00000453847 TLN1Q9Y490 2541 aaKnown RBP-1.59□□□□□ -2.66
HMGN3P1-201ENST00000453847 DEFB4AO15263 64 aa-1.59□□□□□ -2.66
HMGN3P1-201ENST00000453847 PRUNE2Q8WUY3 3088 aa-1.61□□□□□ -2.67
HMGN3P1-201ENST00000453847 MYO15AQ9UKN7 3530 aa-1.61□□□□□ -2.67
HMGN3P1-201ENST00000453847 DEFB136Q30KP8 78 aa-1.62□□□□□ -2.67
HMGN3P1-201ENST00000453847 MT1MQ8N339 61 aa-1.62□□□□□ -2.67
HMGN3P1-201ENST00000453847 CFAP54Q96N23 3096 aa-1.63□□□□□ -2.67
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms