RNA–Protein interactions for RNA: ENST00000453246.5

ABCA13-205, Transcript of ATP binding cassette subfamily A member 13, humanhuman

TSL 2

Gene ABCA13, Length 4,275 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA13-205ENST00000453246 DNAH17Q9UFH2 4485 aa4.88□□□□□ -1.63
ABCA13-205ENST00000453246 KRTAP12-2P59991 146 aa4.88□□□□□ -1.63
ABCA13-205ENST00000453246 KRTAP10-6P60371 365 aaPredicted RBP4.88□□□□□ -1.63
ABCA13-205ENST00000453246 KMT2AQ03164 3969 aa4.88□□□□□ -1.63
ABCA13-205ENST00000453246 LRP1BQ9NZR2 4599 aa4.88□□□□□ -1.63
ABCA13-205ENST00000453246 FAT1Q14517 4588 aa4.83□□□□□ -1.64
ABCA13-205ENST00000453246 DNAH3Q8TD57 4116 aa4.82□□□□□ -1.64
ABCA13-205ENST00000453246 DNAH2Q9P225 4427 aa4.82□□□□□ -1.64
ABCA13-205ENST00000453246 CMYA5Q8N3K9 4069 aa4.81□□□□□ -1.64
ABCA13-205ENST00000453246 KRTAP3-3Q9BYR6 98 aa4.81□□□□□ -1.64
ABCA13-205ENST00000453246 KRTAP12-1P59990 96 aa4.8□□□□□ -1.64
ABCA13-205ENST00000453246 DNAH7Q8WXX0 4024 aa4.8□□□□□ -1.64
ABCA13-205ENST00000453246 FRAS1Q86XX4 4008 aa4.79□□□□□ -1.64
ABCA13-205ENST00000453246 KRTAP3-2Q9BYR7 98 aa4.77□□□□□ -1.65
ABCA13-205ENST00000453246 MT1HL1P0DM35 61 aa4.77□□□□□ -1.65
ABCA13-205ENST00000453246 DYNC1H1Q14204 4646 aaKnown RBP4.74□□□□□ -1.65
ABCA13-205ENST00000453246 DNAH6Q9C0G6 4158 aa4.71□□□□□ -1.66
ABCA13-205ENST00000453246 VPS13BQ7Z7G8 4022 aa4.69□□□□□ -1.66
ABCA13-205ENST00000453246 DYNC2H1Q8NCM8 4307 aaKnown RBP4.69□□□□□ -1.66
ABCA13-205ENST00000453246 PRO2289Q9P1D8 64 aa4.68□□□□□ -1.66
ABCA13-205ENST00000453246 ALMS1Q8TCU4 4167 aa4.68□□□□□ -1.66
ABCA13-205ENST00000453246 KRTAP15-1Q3LI76 137 aa4.67□□□□□ -1.66
ABCA13-205ENST00000453246 HECTD4Q9Y4D8 3996 aa4.67□□□□□ -1.66
ABCA13-205ENST00000453246 MYCBP2O75592 4640 aa4.65□□□□□ -1.67
ABCA13-205ENST00000453246 PP632Q6XCG6 107 aa4.65□□□□□ -1.67
ABCA13-205ENST00000453246 KRTAP4-5Q9BYR2 181 aa4.64□□□□□ -1.67
ABCA13-205ENST00000453246 SACSQ9NZJ4 4579 aa4.6□□□□□ -1.67
ABCA13-205ENST00000453246 HYDINQ4G0P3 5121 aa4.58□□□□□ -1.68
ABCA13-205ENST00000453246 LRP1Q07954 4544 aaKnown RBP4.55□□□□□ -1.68
ABCA13-205ENST00000453246 FAT2Q9NYQ8 4349 aa4.55□□□□□ -1.68
ABCA13-205ENST00000453246 KIAA1109Q2LD37 5005 aa4.55□□□□□ -1.68
ABCA13-205ENST00000453246 RYR1P21817 5038 aa4.54□□□□□ -1.68
ABCA13-205ENST00000453246 PKHD1P08F94 4074 aa4.52□□□□□ -1.69
ABCA13-205ENST00000453246 APOBP04114 4563 aaKnown RBP4.51□□□□□ -1.69
ABCA13-205ENST00000453246 LORP23490 312 aaPredicted RBP4.5□□□□□ -1.69
ABCA13-205ENST00000453246 FAT3Q8TDW7 4589 aa4.5□□□□□ -1.69
ABCA13-205ENST00000453246 RYR3Q15413 4870 aa4.43□□□□□ -1.7
ABCA13-205ENST00000453246 KRTAP17-1Q9BYP8 105 aa4.42□□□□□ -1.7
ABCA13-205ENST00000453246 KRTAP4-1Q9BYQ7 146 aa4.39□□□□□ -1.71
ABCA13-205ENST00000453246 PKD1P98161 4303 aa4.36□□□□□ -1.71
ABCA13-205ENST00000453246 LRP2P98164 4655 aa4.35□□□□□ -1.71
ABCA13-205ENST00000453246 RYR2Q92736 4967 aa4.34□□□□□ -1.71
ABCA13-205ENST00000453246 CRCT1Q9UGL9 99 aa4.34□□□□□ -1.72
ABCA13-205ENST00000453246 KMT2CQ8NEZ4 4911 aaKnown RBP4.32□□□□□ -1.72
ABCA13-205ENST00000453246 HSPG2P98160 4391 aa4.23□□□□□ -1.73
ABCA13-205ENST00000453246 LPAP08519 4548 aa4.17□□□□□ -1.74
ABCA13-205ENST00000453246 HERC2O95714 4834 aa4.15□□□□□ -1.75
ABCA13-205ENST00000453246 INE1O15225 51 aa4.14□□□□□ -1.75
ABCA13-205ENST00000453246 LCE3AQ5TA76 89 aa4.14□□□□□ -1.75
ABCA13-205ENST00000453246 PKHD1L1Q86WI1 4243 aa4.13□□□□□ -1.75
ABCA13-205ENST00000453246 KRTAP10-12P60413 245 aa4.12□□□□□ -1.75
ABCA13-205ENST00000453246 TNXBP22105 4242 aa4.09□□□□□ -1.75
ABCA13-205ENST00000453246 KRTAP23-1A1A580 65 aa4.08□□□□□ -1.76
ABCA13-205ENST00000453246 SYNE1Q8NF91 8797 aaKnown RBP4.05□□□□□ -1.76
ABCA13-205ENST00000453246 KRTAP12-3P60328 96 aa4.04□□□□□ -1.76
ABCA13-205ENST00000453246 EPPK1P58107 5090 aaKnown RBP4.04□□□□□ -1.76
ABCA13-205ENST00000453246 MT1HP80294 61 aa4.04□□□□□ -1.76
ABCA13-205ENST00000453246 SPRR2GQ9BYE4 73 aa4.02□□□□□ -1.77
ABCA13-205ENST00000453246 MT2AP02795 61 aa4.01□□□□□ -1.77
ABCA13-205ENST00000453246 MT1FP04733 61 aa4□□□□□ -1.77
ABCA13-205ENST00000453246 ABCA13Q86UQ4 5058 aa3.97□□□□□ -1.77
ABCA13-205ENST00000453246 KRTAP19-1Q8IUB9 90 aa3.95□□□□□ -1.78
ABCA13-205ENST00000453246 KRTAP8-1Q8IUC2 63 aa3.93□□□□□ -1.78
ABCA13-205ENST00000453246 KRTAP19-2Q3LHN2 52 aa3.91□□□□□ -1.78
ABCA13-205ENST00000453246 MUC2Q02817 5179 aa3.89□□□□□ -1.79
ABCA13-205ENST00000453246 PCLOQ9Y6V0 5065 aa3.87□□□□□ -1.79
ABCA13-205ENST00000453246 LCE2CQ5TA81 110 aa3.87□□□□□ -1.79
ABCA13-205ENST00000453246 KRTAP10-5P60370 271 aa3.86□□□□□ -1.79
ABCA13-205ENST00000453246 BIRC6Q9NR09 4857 aa3.85□□□□□ -1.79
ABCA13-205ENST00000453246 MUC17Q685J3 4493 aa3.85□□□□□ -1.79
ABCA13-205ENST00000453246 HERC1Q15751 4861 aa3.85□□□□□ -1.79
ABCA13-205ENST00000453246 OBSCNQ5VST9 7968 aa3.79□□□□□ -1.8
ABCA13-205ENST00000453246 FSIP2Q5CZC0 6907 aa3.79□□□□□ -1.8
ABCA13-205ENST00000453246 KRTAP9-8Q9BYQ0 159 aa3.78□□□□□ -1.8
ABCA13-205ENST00000453246 FAT4Q6V0I7 4981 aa3.78□□□□□ -1.8
ABCA13-205ENST00000453246 KRTAP19-8Q3LI54 63 aa3.78□□□□□ -1.8
ABCA13-205ENST00000453246 FLGP20930 4061 aaPredicted RBP3.77□□□□□ -1.81
ABCA13-205ENST00000453246 KRTAP10-7P60409 375 aaPredicted RBP3.77□□□□□ -1.81
ABCA13-205ENST00000453246 MT1XP80297 61 aa3.75□□□□□ -1.81
ABCA13-205ENST00000453246 RNF213Q63HN8 5207 aa3.75□□□□□ -1.81
ABCA13-205ENST00000453246 MT1BP07438 61 aa3.75□□□□□ -1.81
ABCA13-205ENST00000453246 SPRR5A0A1B0GTR4 108 aa3.75□□□□□ -1.81
ABCA13-205ENST00000453246 SPRR2FQ96RM1 72 aa3.75□□□□□ -1.81
ABCA13-205ENST00000453246 KRTAP19-5Q3LI72 72 aa3.73□□□□□ -1.81
ABCA13-205ENST00000453246 UBR4Q5T4S7 5183 aa3.67□□□□□ -1.82
ABCA13-205ENST00000453246 HMCN2Q8NDA2 5059 aa3.64□□□□□ -1.83
ABCA13-205ENST00000453246 LCE3CQ5T5A8 94 aa3.64□□□□□ -1.83
ABCA13-205ENST00000453246 KRTAP9-3Q9BYQ3 159 aa3.64□□□□□ -1.83
ABCA13-205ENST00000453246 KRTAP4-8A0A0G2JLE6 195 aa3.6□□□□□ -1.83
ABCA13-205ENST00000453246 KRTAP4-8Q9BYQ9 185 aa3.6□□□□□ -1.83
ABCA13-205ENST00000453246 LCE2BO14633 110 aa3.53□□□□□ -1.85
ABCA13-205ENST00000453246 KRTAP4-7Q9BYR0 210 aa3.45□□□□□ -1.86
ABCA13-205ENST00000453246 SPRR2EP22531 72 aa3.44□□□□□ -1.86
ABCA13-205ENST00000453246 SPRR2BP35325 72 aa3.44□□□□□ -1.86
ABCA13-205ENST00000453246 SPRR2AP35326 72 aa3.44□□□□□ -1.86
ABCA13-205ENST00000453246 DSTQ03001 7570 aaKnown RBP3.42□□□□□ -1.86
ABCA13-205ENST00000453246 MACF1Q9UPN3 7388 aaKnown RBP3.38□□□□□ -1.87
ABCA13-205ENST00000453246 LCE3BQ5TA77 95 aa3.36□□□□□ -1.87
ABCA13-205ENST00000453246 USH2AO75445 5202 aa3.35□□□□□ -1.87
ABCA13-205ENST00000453246 MT1GP13640 62 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms