RNA–Protein interactions for RNA: ENST00000452489.6

PTPA-223, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-223ENST00000452489 XP32Q5T750 250 aa9.49□□□□□ -0.89
PTPA-223ENST00000452489 FAT2Q9NYQ8 4349 aa9.49□□□□□ -0.89
PTPA-223ENST00000452489 RPS29P62273 56 aaKnown RBP9.45□□□□□ -0.9
PTPA-223ENST00000452489 KRTAP12-1P59990 96 aa9.45□□□□□ -0.9
PTPA-223ENST00000452489 PKD1P98161 4303 aa9.39□□□□□ -0.91
PTPA-223ENST00000452489 PKHD1P08F94 4074 aa9.28□□□□□ -0.92
PTPA-223ENST00000452489 PLAC4Q8WY50 150 aa9.26□□□□□ -0.93
PTPA-223ENST00000452489 KRTAP10-8P60410 259 aa9.25□□□□□ -0.93
PTPA-223ENST00000452489 SACSQ9NZJ4 4579 aa9.24□□□□□ -0.93
PTPA-223ENST00000452489 PKHD1L1Q86WI1 4243 aa9.17□□□□□ -0.94
PTPA-223ENST00000452489 HYDINQ4G0P3 5121 aa9.12□□□□□ -0.95
PTPA-223ENST00000452489 SMR3BP02814 79 aaPredicted RBP9.09□□□□□ -0.95
PTPA-223ENST00000452489 KRTAP21-3Q3LHN1 58 aa9.09□□□□□ -0.95
PTPA-223ENST00000452489 APOBP04114 4563 aaKnown RBP9.05□□□□□ -0.96
PTPA-223ENST00000452489 HSPG2P98160 4391 aa9.03□□□□□ -0.96
PTPA-223ENST00000452489 M0QZ58 72 aa9.03□□□□□ -0.96
PTPA-223ENST00000452489 LRP1Q07954 4544 aaKnown RBP9□□□□□ -0.97
PTPA-223ENST00000452489 MYCBP2O75592 4640 aa8.98□□□□□ -0.97
PTPA-223ENST00000452489 FAT1Q14517 4588 aa8.98□□□□□ -0.97
PTPA-223ENST00000452489 DYNC1H1Q14204 4646 aaKnown RBP8.94□□□□□ -0.98
PTPA-223ENST00000452489 FAT3Q8TDW7 4589 aa8.89□□□□□ -0.99
PTPA-223ENST00000452489 KRTAP10-4P60372 401 aaPredicted RBP8.83□□□□□ -1
PTPA-223ENST00000452489 TNXBP22105 4242 aa8.8□□□□□ -1
PTPA-223ENST00000452489 SEC61BP60468 96 aaKnown RBP8.77□□□□□ -1.01
PTPA-223ENST00000452489 LPAP08519 4548 aa8.74□□□□□ -1.01
PTPA-223ENST00000452489 R4GN34 69 aa8.73□□□□□ -1.01
PTPA-223ENST00000452489 KMT2CQ8NEZ4 4911 aaKnown RBP8.62□□□□□ -1.03
PTPA-223ENST00000452489 PP632Q6XCG6 107 aa8.61□□□□□ -1.03
PTPA-223ENST00000452489 LORP23490 312 aaPredicted RBP8.59□□□□□ -1.03
PTPA-223ENST00000452489 RYR2Q92736 4967 aa8.52□□□□□ -1.05
PTPA-223ENST00000452489 RYR3Q15413 4870 aa8.46□□□□□ -1.05
PTPA-223ENST00000452489 SPRR5A0A1B0GTR4 108 aa8.42□□□□□ -1.06
PTPA-223ENST00000452489 LRP2P98164 4655 aa8.41□□□□□ -1.06
PTPA-223ENST00000452489 CAMK2N1Q7Z7J9 78 aa8.41□□□□□ -1.06
PTPA-223ENST00000452489 A0A1B0GVY2 172 aa8.35□□□□□ -1.07
PTPA-223ENST00000452489 PRO2289Q9P1D8 64 aa8.35□□□□□ -1.07
PTPA-223ENST00000452489 EPPK1P58107 5090 aaKnown RBP8.17□□□□□ -1.1
PTPA-223ENST00000452489 TNP1P09430 55 aa8.13□□□□□ -1.11
PTPA-223ENST00000452489 Q5VSD8 79 aa8.12□□□□□ -1.11
PTPA-223ENST00000452489 KIAA1109Q2LD37 5005 aa8.07□□□□□ -1.12
PTPA-223ENST00000452489 KRTAP23-1A1A580 65 aa8.04□□□□□ -1.12
PTPA-223ENST00000452489 MT1HL1P0DM35 61 aa8.04□□□□□ -1.12
PTPA-223ENST00000452489 INE1O15225 51 aa8.02□□□□□ -1.13
PTPA-223ENST00000452489 RYR1P21817 5038 aa8□□□□□ -1.13
PTPA-223ENST00000452489 KRTAP17-1Q9BYP8 105 aa7.99□□□□□ -1.13
PTPA-223ENST00000452489 MUC17Q685J3 4493 aa7.95□□□□□ -1.14
PTPA-223ENST00000452489 KRTAP4-1Q9BYQ7 146 aa7.84□□□□□ -1.15
PTPA-223ENST00000452489 ABCA13Q86UQ4 5058 aa7.82□□□□□ -1.16
PTPA-223ENST00000452489 BIRC6Q9NR09 4857 aa7.77□□□□□ -1.16
PTPA-223ENST00000452489 KRTAP4-5Q9BYR2 181 aa7.74□□□□□ -1.17
PTPA-223ENST00000452489 KRTAP19-2Q3LHN2 52 aa7.73□□□□□ -1.17
PTPA-223ENST00000452489 LCE3AQ5TA76 89 aa7.71□□□□□ -1.18
PTPA-223ENST00000452489 HERC2O95714 4834 aa7.61□□□□□ -1.19
PTPA-223ENST00000452489 PCLOQ9Y6V0 5065 aa7.59□□□□□ -1.19
PTPA-223ENST00000452489 FLGP20930 4061 aaPredicted RBP7.55□□□□□ -1.2
PTPA-223ENST00000452489 MUC2Q02817 5179 aa7.52□□□□□ -1.21
PTPA-223ENST00000452489 HERC1Q15751 4861 aa7.45□□□□□ -1.22
PTPA-223ENST00000452489 KRTAP8-1Q8IUC2 63 aa7.4□□□□□ -1.23
PTPA-223ENST00000452489 J3QL48 77 aa7.35□□□□□ -1.23
PTPA-223ENST00000452489 KRTAP10-12P60413 245 aa7.32□□□□□ -1.24
PTPA-223ENST00000452489 KRTAP19-1Q8IUB9 90 aa7.3□□□□□ -1.24
PTPA-223ENST00000452489 SPRR2GQ9BYE4 73 aa7.29□□□□□ -1.24
PTPA-223ENST00000452489 KRTAP12-3P60328 96 aa7.24□□□□□ -1.25
PTPA-223ENST00000452489 KRTAP10-10P60014 251 aa7.2□□□□□ -1.26
PTPA-223ENST00000452489 HMCN2Q8NDA2 5059 aa7.11□□□□□ -1.27
PTPA-223ENST00000452489 FAT4Q6V0I7 4981 aa7.09□□□□□ -1.28
PTPA-223ENST00000452489 KRTAP10-5P60370 271 aa7.03□□□□□ -1.28
PTPA-223ENST00000452489 UBR4Q5T4S7 5183 aa6.97□□□□□ -1.29
PTPA-223ENST00000452489 MT1XP80297 61 aa6.95□□□□□ -1.3
PTPA-223ENST00000452489 LCE2CQ5TA81 110 aa6.92□□□□□ -1.3
PTPA-223ENST00000452489 RNF213Q63HN8 5207 aa6.91□□□□□ -1.3
PTPA-223ENST00000452489 KRTAP10-7P60409 375 aaPredicted RBP6.9□□□□□ -1.31
PTPA-223ENST00000452489 MT1FP04733 61 aa6.87□□□□□ -1.31
PTPA-223ENST00000452489 LCE3CQ5T5A8 94 aa6.86□□□□□ -1.31
PTPA-223ENST00000452489 M0R2T5 61 aa6.85□□□□□ -1.31
PTPA-223ENST00000452489 KRTAP9-6A8MVA2 160 aa6.81□□□□□ -1.32
PTPA-223ENST00000452489 KRTAP19-8Q3LI54 63 aa6.8□□□□□ -1.32
PTPA-223ENST00000452489 MT2AP02795 61 aa6.79□□□□□ -1.32
PTPA-223ENST00000452489 MT1BP07438 61 aa6.79□□□□□ -1.32
PTPA-223ENST00000452489 KRTAP2-3P0C7H8 128 aa6.74□□□□□ -1.33
PTPA-223ENST00000452489 KRTAP2-4Q9BYR9 128 aa6.74□□□□□ -1.33
PTPA-223ENST00000452489 KRTAP2-1Q9BYU5 128 aa6.74□□□□□ -1.33
PTPA-223ENST00000452489 KRTAP19-5Q3LI72 72 aa6.72□□□□□ -1.33
PTPA-223ENST00000452489 MT1HP80294 61 aa6.67□□□□□ -1.34
PTPA-223ENST00000452489 KRTAP9-8Q9BYQ0 159 aa6.64□□□□□ -1.35
PTPA-223ENST00000452489 KMT2DO14686 5537 aa6.52□□□□□ -1.37
PTPA-223ENST00000452489 KRTAP4-7Q9BYR0 210 aa6.49□□□□□ -1.37
PTPA-223ENST00000452489 KRTAP4-8A0A0G2JLE6 195 aa6.34□□□□□ -1.39
PTPA-223ENST00000452489 KRTAP4-8Q9BYQ9 185 aa6.34□□□□□ -1.39
PTPA-223ENST00000452489 KRTAP9-3Q9BYQ3 159 aa6.29□□□□□ -1.4
PTPA-223ENST00000452489 KRTAP12-4P60329 112 aa6.22□□□□□ -1.41
PTPA-223ENST00000452489 KRTAP19-7Q3SYF9 63 aa6.19□□□□□ -1.42
PTPA-223ENST00000452489 USH2AO75445 5202 aa6.15□□□□□ -1.42
PTPA-223ENST00000452489 LCE2AQ5TA79 106 aaPredicted RBP6.07□□□□□ -1.44
PTPA-223ENST00000452489 MT1LQ93083 61 aa6.05□□□□□ -1.44
PTPA-223ENST00000452489 LOC100996750A0A140TA64 210 aa6□□□□□ -1.45
PTPA-223ENST00000452489 LCE2BO14633 110 aa5.99□□□□□ -1.45
PTPA-223ENST00000452489 FSIP2Q5CZC0 6907 aa5.95□□□□□ -1.46
PTPA-223ENST00000452489 MT1EP04732 61 aa5.91□□□□□ -1.46
PTPA-223ENST00000452489 KRTAP19-4Q3LI73 84 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms