RNA–Protein interactions for RNA: ENST00000451107.3

FGD6-202, Transcript of FYVE, RhoGEF and PH domain containing 6, humanhuman

TSL 1 (best)

Gene FGD6, Length 2,232 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD6-202ENST00000451107 CDC42SE1Q9NRR8 79 aa11.05□□□□□ -0.64
FGD6-202ENST00000451107 HERC2O95714 4834 aa11.04□□□□□ -0.64
FGD6-202ENST00000451107 SEC61GP60059 68 aa10.98□□□□□ -0.65
FGD6-202ENST00000451107 LRP2P98164 4655 aa10.92□□□□□ -0.66
FGD6-202ENST00000451107 LPAP08519 4548 aa10.89□□□□□ -0.67
FGD6-202ENST00000451107 UQCR11O14957 56 aa10.88□□□□□ -0.67
FGD6-202ENST00000451107 SEC61BP60468 96 aaKnown RBP10.88□□□□□ -0.67
FGD6-202ENST00000451107 PMAIP1Q13794 54 aa10.85□□□□□ -0.67
FGD6-202ENST00000451107 S4R3F8 94 aa10.85□□□□□ -0.67
FGD6-202ENST00000451107 H1FX-AS1Q4G0G2 97 aa10.84□□□□□ -0.67
FGD6-202ENST00000451107 RBM12B-AS1Q9P1G2 102 aa10.84□□□□□ -0.67
FGD6-202ENST00000451107 KRTAP3-3Q9BYR6 98 aa10.81□□□□□ -0.68
FGD6-202ENST00000451107 SPATA8Q6RVD6 105 aa10.8□□□□□ -0.68
FGD6-202ENST00000451107 MIR22HGQ0VDD5 57 aa10.78□□□□□ -0.68
FGD6-202ENST00000451107 A6NN06 94 aa10.72□□□□□ -0.69
FGD6-202ENST00000451107 A0A1B0GU33 70 aa10.68□□□□□ -0.7
FGD6-202ENST00000451107 MUC17Q685J3 4493 aa10.6□□□□□ -0.71
FGD6-202ENST00000451107 H0YAA0 97 aa10.58□□□□□ -0.72
FGD6-202ENST00000451107 KRTAP4-1Q9BYQ7 146 aa10.57□□□□□ -0.72
FGD6-202ENST00000451107 CSAG1Q6PB30 78 aa10.56□□□□□ -0.72
FGD6-202ENST00000451107 KRTAP10-6P60371 365 aaPredicted RBP10.54□□□□□ -0.72
FGD6-202ENST00000451107 KTN1-AS1Q86SY8 53 aa10.53□□□□□ -0.72
FGD6-202ENST00000451107 KRTAP3-2Q9BYR7 98 aa10.52□□□□□ -0.73
FGD6-202ENST00000451107 PCLOQ9Y6V0 5065 aa10.5□□□□□ -0.73
FGD6-202ENST00000451107 ADM2Q7Z4H4 148 aa10.42□□□□□ -0.74
FGD6-202ENST00000451107 P0C880 135 aa10.39□□□□□ -0.75
FGD6-202ENST00000451107 HMCN2Q8NDA2 5059 aa10.37□□□□□ -0.75
FGD6-202ENST00000451107 KRTAP19-2Q3LHN2 52 aa10.36□□□□□ -0.75
FGD6-202ENST00000451107 HERC1Q15751 4861 aa10.35□□□□□ -0.75
FGD6-202ENST00000451107 KRTAP13-4Q3LI77 160 aa10.31□□□□□ -0.76
FGD6-202ENST00000451107 K7ERS5 55 aa10.25□□□□□ -0.77
FGD6-202ENST00000451107 M0QZ58 72 aa10.19□□□□□ -0.78
FGD6-202ENST00000451107 PRAC1Q96KF2 57 aa10.18□□□□□ -0.78
FGD6-202ENST00000451107 A0A0D9SG42 100 aa10.17□□□□□ -0.78
FGD6-202ENST00000451107 MUC2Q02817 5179 aa10.07□□□□□ -0.8
FGD6-202ENST00000451107 FLGP20930 4061 aaPredicted RBP10.07□□□□□ -0.8
FGD6-202ENST00000451107 R4GN34 69 aa10.02□□□□□ -0.81
FGD6-202ENST00000451107 LCE2CQ5TA81 110 aa9.96□□□□□ -0.82
FGD6-202ENST00000451107 KRTAP12-1P59990 96 aa9.95□□□□□ -0.82
FGD6-202ENST00000451107 KRTAP12-2P59991 146 aa9.94□□□□□ -0.82
FGD6-202ENST00000451107 SPINT4Q6UDR6 99 aa9.91□□□□□ -0.82
FGD6-202ENST00000451107 LORP23490 312 aaPredicted RBP9.91□□□□□ -0.82
FGD6-202ENST00000451107 ROMO1P60602 79 aa9.87□□□□□ -0.83
FGD6-202ENST00000451107 LINC01554Q52M75 96 aa9.85□□□□□ -0.83
FGD6-202ENST00000451107 RNF213Q63HN8 5207 aa9.84□□□□□ -0.83
FGD6-202ENST00000451107 UBR4Q5T4S7 5183 aa9.8□□□□□ -0.84
FGD6-202ENST00000451107 CRIPTQ9P021 101 aa9.79□□□□□ -0.84
FGD6-202ENST00000451107 MT1HP80294 61 aa9.75□□□□□ -0.85
FGD6-202ENST00000451107 KRTAP25-1Q3LHN0 102 aa9.74□□□□□ -0.85
FGD6-202ENST00000451107 M0R2T5 61 aa9.71□□□□□ -0.85
FGD6-202ENST00000451107 FAT4Q6V0I7 4981 aa9.67□□□□□ -0.86
FGD6-202ENST00000451107 SPRR2GQ9BYE4 73 aa9.47□□□□□ -0.89
FGD6-202ENST00000451107 C10orf95Q9H7T3 257 aa9.47□□□□□ -0.89
FGD6-202ENST00000451107 MT2AP02795 61 aa9.46□□□□□ -0.9
FGD6-202ENST00000451107 CAMK2N1Q7Z7J9 78 aa9.44□□□□□ -0.9
FGD6-202ENST00000451107 KRTAP9-8Q9BYQ0 159 aa9.44□□□□□ -0.9
FGD6-202ENST00000451107 MT1FP04733 61 aa9.41□□□□□ -0.9
FGD6-202ENST00000451107 KRTAP10-10P60014 251 aa9.4□□□□□ -0.9
FGD6-202ENST00000451107 KRTAP19-1Q8IUB9 90 aa9.39□□□□□ -0.91
FGD6-202ENST00000451107 PLAC4Q8WY50 150 aa9.27□□□□□ -0.93
FGD6-202ENST00000451107 KRTAP19-8Q3LI54 63 aa9.16□□□□□ -0.94
FGD6-202ENST00000451107 KRTAP9-3Q9BYQ3 159 aa9.08□□□□□ -0.96
FGD6-202ENST00000451107 LCE2AQ5TA79 106 aaPredicted RBP9.07□□□□□ -0.96
FGD6-202ENST00000451107 TNP1P09430 55 aa9.05□□□□□ -0.96
FGD6-202ENST00000451107 PP632Q6XCG6 107 aa9.01□□□□□ -0.97
FGD6-202ENST00000451107 MT1BP07438 61 aa8.99□□□□□ -0.97
FGD6-202ENST00000451107 KRTAP23-1A1A580 65 aa8.9□□□□□ -0.98
FGD6-202ENST00000451107 KRTAP10-5P60370 271 aa8.8□□□□□ -1
FGD6-202ENST00000451107 MT1XP80297 61 aa8.79□□□□□ -1
FGD6-202ENST00000451107 KRTAP15-1Q3LI76 137 aa8.78□□□□□ -1
FGD6-202ENST00000451107 LCE2BO14633 110 aa8.76□□□□□ -1.01
FGD6-202ENST00000451107 PRO2289Q9P1D8 64 aa8.68□□□□□ -1.02
FGD6-202ENST00000451107 LCE3AQ5TA76 89 aa8.57□□□□□ -1.04
FGD6-202ENST00000451107 KRTAP10-12P60413 245 aa8.49□□□□□ -1.05
FGD6-202ENST00000451107 KRTAP10-7P60409 375 aaPredicted RBP8.46□□□□□ -1.05
FGD6-202ENST00000451107 KRTAP8-1Q8IUC2 63 aa8.43□□□□□ -1.06
FGD6-202ENST00000451107 USH2AO75445 5202 aa8.4□□□□□ -1.06
FGD6-202ENST00000451107 NDUFAF8A1L188 74 aa8.36□□□□□ -1.07
FGD6-202ENST00000451107 KRTAP12-3P60328 96 aa8.23□□□□□ -1.09
FGD6-202ENST00000451107 H3BS24 57 aa8.19□□□□□ -1.1
FGD6-202ENST00000451107 KRTAP19-6Q3LI70 58 aa8.14□□□□□ -1.11
FGD6-202ENST00000451107 SPRR5A0A1B0GTR4 108 aa8.13□□□□□ -1.11
FGD6-202ENST00000451107 SSPOA2VEC9 5147 aa8.12□□□□□ -1.11
FGD6-202ENST00000451107 LCE2DQ5TA82 110 aaPredicted RBP8.1□□□□□ -1.11
FGD6-202ENST00000451107 LUZP6Q538Z0 58 aa8.07□□□□□ -1.12
FGD6-202ENST00000451107 KRTAP19-5Q3LI72 72 aa8.04□□□□□ -1.12
FGD6-202ENST00000451107 KRTAP4-8A0A0G2JLE6 195 aa8.02□□□□□ -1.13
FGD6-202ENST00000451107 KRTAP4-8Q9BYQ9 185 aa8.02□□□□□ -1.13
FGD6-202ENST00000451107 KMT2DO14686 5537 aa7.97□□□□□ -1.13
FGD6-202ENST00000451107 KRTAP19-7Q3SYF9 63 aa7.84□□□□□ -1.15
FGD6-202ENST00000451107 FSIP2Q5CZC0 6907 aa7.81□□□□□ -1.16
FGD6-202ENST00000451107 LCE3CQ5T5A8 94 aa7.72□□□□□ -1.17
FGD6-202ENST00000451107 MT1EP04732 61 aa7.69□□□□□ -1.18
FGD6-202ENST00000451107 KRTAP19-4Q3LI73 84 aa7.67□□□□□ -1.18
FGD6-202ENST00000451107 FCGBPQ9Y6R7 5405 aaPredicted RBP7.64□□□□□ -1.19
FGD6-202ENST00000451107 MT1LQ93083 61 aa7.59□□□□□ -1.19
FGD6-202ENST00000451107 KRTAP9-2Q9BYQ4 174 aa7.55□□□□□ -1.2
FGD6-202ENST00000451107 KRTAP4-7Q9BYR0 210 aa7.39□□□□□ -1.23
FGD6-202ENST00000451107 CRCT1Q9UGL9 99 aa7.36□□□□□ -1.23
FGD6-202ENST00000451107 A0A0A0MQY5 61 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms