RNA–Protein interactions for RNA: ENST00000451107.3

FGD6-202, Transcript of FYVE, RhoGEF and PH domain containing 6, humanhuman

TSL 1 (best)

Gene FGD6, Length 2,232 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD6-202ENST00000451107 NISCHQ9Y2I1 1504 aa47.38■■■■■ 5.18
FGD6-202ENST00000451107 CCDC180Q9P1Z9 1646 aa41.08■■■■■ 4.17
FGD6-202ENST00000451107 ZCCHC6Q5VYS8 1495 aaKnown RBP39.92■■■■□ 3.98
FGD6-202ENST00000451107 DCAF1Q9Y4B6 1507 aa39.19■■■■□ 3.86
FGD6-202ENST00000451107 SHROOM4Q9ULL8 1493 aa39.02■■■■□ 3.84
FGD6-202ENST00000451107 DCAF8L2P0C7V8 631 aa38.93■■■■□ 3.82
FGD6-202ENST00000451107 MYO15BQ96JP2 1530 aa38.52■■■■□ 3.76
FGD6-202ENST00000451107 ABCC9O60706 1549 aa38.34■■■■□ 3.73
FGD6-202ENST00000451107 NACADO15069 1562 aa38.13■■■■□ 3.69
FGD6-202ENST00000451107 SCRIBQ14160 1630 aa37.85■■■■□ 3.65
FGD6-202ENST00000451107 SUPT5HO00267 1087 aaKnown RBP37.81■■■■□ 3.64
FGD6-202ENST00000451107 RB1CC1Q8TDY2 1594 aa37.68■■■■□ 3.62
FGD6-202ENST00000451107 RSF1Q96T23 1441 aaPredicted RBP36.96■■■■□ 3.51
FGD6-202ENST00000451107 UNC13AQ9UPW8 1703 aa36.93■■■■□ 3.5
FGD6-202ENST00000451107 CECR2Q9BXF3 1484 aa36.76■■■■□ 3.48
FGD6-202ENST00000451107 MROH2BQ7Z745 1585 aa36.62■■■■□ 3.45
FGD6-202ENST00000451107 BAZ1AQ9NRL2 1556 aaPredicted RBP36.56■■■■□ 3.44
FGD6-202ENST00000451107 BICRAQ9NZM4 1560 aa36.51■■■■□ 3.43
FGD6-202ENST00000451107 CHIC1Q5VXU3 224 aa36.49■■■■□ 3.43
FGD6-202ENST00000451107 WIZO95785 1651 aa36.36■■■■□ 3.41
FGD6-202ENST00000451107 SMARCA4P51532 1647 aa36.32■■■■□ 3.4
FGD6-202ENST00000451107 PABPN1Q86U42 306 aaKnown RBP eCLIP36.25■■■■□ 3.39
FGD6-202ENST00000451107 TOP2AP11388 1531 aaKnown RBP36.01■■■■□ 3.36
FGD6-202ENST00000451107 PEG3Q9GZU2 1588 aa35.85■■■■□ 3.33
FGD6-202ENST00000451107 SMARCA2P51531 1590 aa35.68■■■■□ 3.3
FGD6-202ENST00000451107 CCDC88BA6NC98 1476 aa35.63■■■■□ 3.3
FGD6-202ENST00000451107 EIF4G1Q04637 1599 aaKnown RBP35.62■■■■□ 3.29
FGD6-202ENST00000451107 ATAD2BQ9ULI0 1458 aa35.57■■■■□ 3.29
FGD6-202ENST00000451107 TRIM41Q8WV44 630 aa35.53■■■■□ 3.28
FGD6-202ENST00000451107 BAZ1BQ9UIG0 1483 aaKnown RBP35.42■■■■□ 3.26
FGD6-202ENST00000451107 HMGXB3Q12766 1538 aa35.19■■■■□ 3.22
FGD6-202ENST00000451107 NCAPD3P42695 1498 aa35.17■■■■□ 3.22
FGD6-202ENST00000451107 LOC105371045A0A1W2PR82 267 aa35.09■■■■□ 3.21
FGD6-202ENST00000451107 ABCC8Q09428 1581 aa35.06■■■■□ 3.2
FGD6-202ENST00000451107 FAM9AQ8IZU1 332 aaPredicted RBP34.87■■■■□ 3.17
FGD6-202ENST00000451107 WRNQ14191 1432 aaPredicted RBP eCLIP34.79■■■■□ 3.16
FGD6-202ENST00000451107 CC2D2AQ9P2K1 1620 aa34.71■■■■□ 3.15
FGD6-202ENST00000451107 SYNJ1O43426 1573 aa34.62■■■■□ 3.13
FGD6-202ENST00000451107 EEA1Q15075 1411 aa34.61■■■■□ 3.13
FGD6-202ENST00000451107 CFTRP13569 1480 aa34.55■■■■□ 3.12
FGD6-202ENST00000451107 SOGA1O94964 1423 aa34.51■■■■□ 3.12
FGD6-202ENST00000451107 TOP2BQ02880 1626 aa34.45■■■■□ 3.11
FGD6-202ENST00000451107 PRDM2Q13029 1718 aa34.44■■■■□ 3.1
FGD6-202ENST00000451107 BIVM-ERCC5R4GMW8 1640 aa34.41■■■■□ 3.1
FGD6-202ENST00000451107 EHMT2Q96KQ7 1210 aa34.35■■■■□ 3.09
FGD6-202ENST00000451107 RUSC2Q8N2Y8 1516 aa34.34■■■■□ 3.09
FGD6-202ENST00000451107 CSRNP3Q8WYN3 585 aa34.33■■■■□ 3.09
FGD6-202ENST00000451107 CADPSQ9ULU8 1353 aa34.32■■■■□ 3.08
FGD6-202ENST00000451107 CUX1P39880 1505 aa34.21■■■■□ 3.07
FGD6-202ENST00000451107 GOLGA3Q08378 1498 aa34.14■■■■□ 3.06
FGD6-202ENST00000451107 TNIKQ9UKE5 1360 aa34.13■■■■□ 3.05
FGD6-202ENST00000451107 KIF21BO75037 1637 aa34.12■■■■□ 3.05
FGD6-202ENST00000451107 CEP164Q9UPV0 1460 aa34.09■■■■□ 3.05
FGD6-202ENST00000451107 PCGF6Q9BYE7 350 aa34.08■■■■□ 3.05
FGD6-202ENST00000451107 CEP162Q5TB80 1403 aa33.98■■■■□ 3.03
FGD6-202ENST00000451107 TRIM26Q12899 539 aaPredicted RBP33.98■■■■□ 3.03
FGD6-202ENST00000451107 FANCD2Q9BXW9 1451 aa33.95■■■■□ 3.02
FGD6-202ENST00000451107 UBTFP17480 764 aaKnown RBP33.94■■■■□ 3.02
FGD6-202ENST00000451107 LAMC3Q9Y6N6 1575 aa33.91■■■■□ 3.02
FGD6-202ENST00000451107 KIF27Q86VH2 1401 aa33.87■■■■□ 3.01
FGD6-202ENST00000451107 NESP48681 1621 aa33.82■■■■□ 3
FGD6-202ENST00000451107 RAPGEF2Q9Y4G8 1499 aa33.8■■■■□ 3
FGD6-202ENST00000451107 ERICH3Q5RHP9 1530 aa33.8■■■■□ 3
FGD6-202ENST00000451107 PRXQ9BXM0 1461 aa33.77■■■■□ 3
FGD6-202ENST00000451107 FGD5Q6ZNL6 1462 aa33.76■■■□□ 2.99
FGD6-202ENST00000451107 DNMBPQ6XZF7 1577 aa33.76■■■□□ 2.99
FGD6-202ENST00000451107 CUX2O14529 1486 aa33.65■■■□□ 2.98
FGD6-202ENST00000451107 TOPBP1Q92547 1522 aa33.64■■■□□ 2.98
FGD6-202ENST00000451107 PDS5BQ9NTI5 1447 aa33.63■■■□□ 2.97
FGD6-202ENST00000451107 DNAJC5BQ9UF47 199 aa33.6■■■□□ 2.97
FGD6-202ENST00000451107 CLIP1P30622 1438 aa33.6■■■□□ 2.97
FGD6-202ENST00000451107 HRCP23327 699 aa33.57■■■□□ 2.96
FGD6-202ENST00000451107 POLA1P09884 1462 aaPredicted RBP33.51■■■□□ 2.96
FGD6-202ENST00000451107 URB2Q14146 1524 aaKnown RBP33.48■■■□□ 2.95
FGD6-202ENST00000451107 IGF1RP08069 1367 aa33.48■■■□□ 2.95
FGD6-202ENST00000451107 ABCA10Q8WWZ4 1543 aa33.48■■■□□ 2.95
FGD6-202ENST00000451107 KIF21AQ7Z4S6 1674 aa33.44■■■□□ 2.94
FGD6-202ENST00000451107 RAD54L2Q9Y4B4 1467 aa33.4■■■□□ 2.94
FGD6-202ENST00000451107 VPS8Q8N3P4 1428 aa33.39■■■□□ 2.94
FGD6-202ENST00000451107 PPARGC1BQ86YN6 1023 aaKnown RBP33.39■■■□□ 2.94
FGD6-202ENST00000451107 CARMIL1Q5VZK9 1371 aa33.34■■■□□ 2.93
FGD6-202ENST00000451107 WDR97A6NE52 1622 aa33.33■■■□□ 2.93
FGD6-202ENST00000451107 CUL7Q14999 1698 aa33.22■■■□□ 2.91
FGD6-202ENST00000451107 RANGAP1P46060 587 aaPredicted RBP33.2■■■□□ 2.91
FGD6-202ENST00000451107 ARAP1Q96P48 1450 aa33.2■■■□□ 2.9
FGD6-202ENST00000451107 ABCA5Q8WWZ7 1642 aa33.17■■■□□ 2.9
FGD6-202ENST00000451107 MRC2Q9UBG0 1479 aa33.17■■■□□ 2.9
FGD6-202ENST00000451107 TARBP1Q13395 1621 aaKnown RBP33.09■■■□□ 2.89
FGD6-202ENST00000451107 ARHGAP35Q9NRY4 1499 aa33.09■■■□□ 2.89
FGD6-202ENST00000451107 APLP2Q06481 763 aa33.08■■■□□ 2.89
FGD6-202ENST00000451107 GAPVD1Q14C86 1478 aa33.06■■■□□ 2.88
FGD6-202ENST00000451107 TTBK1Q5TCY1 1321 aaPredicted RBP33.04■■■□□ 2.88
FGD6-202ENST00000451107 TDRD9Q8NDG6 1382 aaKnown RBP33.02■■■□□ 2.88
FGD6-202ENST00000451107 WDR62O43379 1518 aa32.97■■■□□ 2.87
FGD6-202ENST00000451107 ZEB1P37275 1124 aaPredicted RBP32.94■■■□□ 2.86
FGD6-202ENST00000451107 CTTNBP2Q8WZ74 1663 aa32.93■■■□□ 2.86
FGD6-202ENST00000451107 PBRM1Q86U86 1689 aa32.85■■■□□ 2.85
FGD6-202ENST00000451107 IFT140Q96RY7 1462 aa32.85■■■□□ 2.85
FGD6-202ENST00000451107 EFCAB5A4FU69 1503 aa32.84■■■□□ 2.85
FGD6-202ENST00000451107 ERCC6Q03468 1493 aa32.84■■■□□ 2.85
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms