RNA–Protein interactions for RNA: ENST00000449246.5

TRAK1-206, Transcript of trafficking kinesin protein 1, humanhuman

TSL 1 (best) BASIC

Gene TRAK1, Length 3,260 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-206ENST00000449246 KRTAP13-4Q3LI77 160 aa6.16□□□□□ -1.42
TRAK1-206ENST00000449246 MYCBP2O75592 4640 aa6.14□□□□□ -1.43
TRAK1-206ENST00000449246 KRTAP10-6P60371 365 aaPredicted RBP6.11□□□□□ -1.43
TRAK1-206ENST00000449246 LRP1Q07954 4544 aaKnown RBP6.11□□□□□ -1.43
TRAK1-206ENST00000449246 LCE2DQ5TA82 110 aaPredicted RBP6.1□□□□□ -1.43
TRAK1-206ENST00000449246 S4R3F8 94 aa6.08□□□□□ -1.44
TRAK1-206ENST00000449246 APOBP04114 4563 aaKnown RBP6.07□□□□□ -1.44
TRAK1-206ENST00000449246 KRTAP10-4P60372 401 aaPredicted RBP6.06□□□□□ -1.44
TRAK1-206ENST00000449246 KRTAP3-3Q9BYR6 98 aa6.04□□□□□ -1.44
TRAK1-206ENST00000449246 PKHD1L1Q86WI1 4243 aa6.03□□□□□ -1.44
TRAK1-206ENST00000449246 HSPG2P98160 4391 aa6.02□□□□□ -1.45
TRAK1-206ENST00000449246 KRTAP3-2Q9BYR7 98 aa6.02□□□□□ -1.45
TRAK1-206ENST00000449246 KRTAP12-2P59991 146 aa6.01□□□□□ -1.45
TRAK1-206ENST00000449246 KRTAP10-8P60410 259 aa5.99□□□□□ -1.45
TRAK1-206ENST00000449246 KMT2CQ8NEZ4 4911 aaKnown RBP5.98□□□□□ -1.45
TRAK1-206ENST00000449246 A0A1B0GVY2 172 aa5.98□□□□□ -1.45
TRAK1-206ENST00000449246 FAT3Q8TDW7 4589 aa5.97□□□□□ -1.45
TRAK1-206ENST00000449246 KRTAP15-1Q3LI76 137 aa5.96□□□□□ -1.46
TRAK1-206ENST00000449246 LPAP08519 4548 aa5.91□□□□□ -1.46
TRAK1-206ENST00000449246 KRTAP12-1P59990 96 aa5.9□□□□□ -1.46
TRAK1-206ENST00000449246 A0A0A0MQY5 61 aa5.89□□□□□ -1.47
TRAK1-206ENST00000449246 TNXBP22105 4242 aa5.88□□□□□ -1.47
TRAK1-206ENST00000449246 XP32Q5T750 250 aa5.87□□□□□ -1.47
TRAK1-206ENST00000449246 RYR2Q92736 4967 aa5.87□□□□□ -1.47
TRAK1-206ENST00000449246 KRTAP21-3Q3LHN1 58 aa5.84□□□□□ -1.47
TRAK1-206ENST00000449246 Q5VSD8 79 aa5.84□□□□□ -1.47
TRAK1-206ENST00000449246 KRTAP17-1Q9BYP8 105 aa5.82□□□□□ -1.48
TRAK1-206ENST00000449246 M0QZ58 72 aa5.8□□□□□ -1.48
TRAK1-206ENST00000449246 LRP2P98164 4655 aa5.8□□□□□ -1.48
TRAK1-206ENST00000449246 KIAA1109Q2LD37 5005 aa5.77□□□□□ -1.49
TRAK1-206ENST00000449246 R4GN34 69 aa5.76□□□□□ -1.49
TRAK1-206ENST00000449246 RYR3Q15413 4870 aa5.71□□□□□ -1.49
TRAK1-206ENST00000449246 PLAC4Q8WY50 150 aa5.7□□□□□ -1.5
TRAK1-206ENST00000449246 RYR1P21817 5038 aa5.68□□□□□ -1.5
TRAK1-206ENST00000449246 MT1HL1P0DM35 61 aa5.65□□□□□ -1.5
TRAK1-206ENST00000449246 LUZP6Q538Z0 58 aa5.64□□□□□ -1.51
TRAK1-206ENST00000449246 ABCA13Q86UQ4 5058 aa5.62□□□□□ -1.51
TRAK1-206ENST00000449246 EPPK1P58107 5090 aaKnown RBP5.6□□□□□ -1.51
TRAK1-206ENST00000449246 MUC2Q02817 5179 aa5.59□□□□□ -1.51
TRAK1-206ENST00000449246 CAMK2N1Q7Z7J9 78 aa5.58□□□□□ -1.52
TRAK1-206ENST00000449246 LORP23490 312 aaPredicted RBP5.52□□□□□ -1.53
TRAK1-206ENST00000449246 J3QL48 77 aa5.52□□□□□ -1.53
TRAK1-206ENST00000449246 KRTAP4-5Q9BYR2 181 aa5.49□□□□□ -1.53
TRAK1-206ENST00000449246 PP632Q6XCG6 107 aa5.4□□□□□ -1.55
TRAK1-206ENST00000449246 KRTAP4-1Q9BYQ7 146 aa5.4□□□□□ -1.55
TRAK1-206ENST00000449246 SEC61BP60468 96 aaKnown RBP5.36□□□□□ -1.55
TRAK1-206ENST00000449246 MUC17Q685J3 4493 aa5.35□□□□□ -1.55
TRAK1-206ENST00000449246 TNP1P09430 55 aa5.28□□□□□ -1.56
TRAK1-206ENST00000449246 RNF213Q63HN8 5207 aa5.27□□□□□ -1.57
TRAK1-206ENST00000449246 FAT4Q6V0I7 4981 aa5.27□□□□□ -1.57
TRAK1-206ENST00000449246 HERC2O95714 4834 aa5.23□□□□□ -1.57
TRAK1-206ENST00000449246 HERC1Q15751 4861 aa5.23□□□□□ -1.57
TRAK1-206ENST00000449246 KRTAP19-2Q3LHN2 52 aa5.18□□□□□ -1.58
TRAK1-206ENST00000449246 PCLOQ9Y6V0 5065 aa5.14□□□□□ -1.59
TRAK1-206ENST00000449246 LCE2BO14633 110 aa5.14□□□□□ -1.59
TRAK1-206ENST00000449246 UBR4Q5T4S7 5183 aa5.04□□□□□ -1.6
TRAK1-206ENST00000449246 FLGP20930 4061 aaPredicted RBP5.03□□□□□ -1.6
TRAK1-206ENST00000449246 SPRR5A0A1B0GTR4 108 aa4.99□□□□□ -1.61
TRAK1-206ENST00000449246 KRTAP23-1A1A580 65 aa4.97□□□□□ -1.61
TRAK1-206ENST00000449246 M0R2T5 61 aa4.97□□□□□ -1.61
TRAK1-206ENST00000449246 HMCN2Q8NDA2 5059 aa4.96□□□□□ -1.62
TRAK1-206ENST00000449246 BIRC6Q9NR09 4857 aa4.96□□□□□ -1.62
TRAK1-206ENST00000449246 LCE2CQ5TA81 110 aa4.95□□□□□ -1.62
TRAK1-206ENST00000449246 LCE3AQ5TA76 89 aa4.93□□□□□ -1.62
TRAK1-206ENST00000449246 LCE2AQ5TA79 106 aaPredicted RBP4.88□□□□□ -1.63
TRAK1-206ENST00000449246 PRO2289Q9P1D8 64 aa4.86□□□□□ -1.63
TRAK1-206ENST00000449246 FSIP2Q5CZC0 6907 aa4.85□□□□□ -1.63
TRAK1-206ENST00000449246 KRTAP19-1Q8IUB9 90 aa4.84□□□□□ -1.64
TRAK1-206ENST00000449246 KRTAP10-10P60014 251 aa4.8□□□□□ -1.64
TRAK1-206ENST00000449246 USH2AO75445 5202 aa4.79□□□□□ -1.64
TRAK1-206ENST00000449246 SPRR2GQ9BYE4 73 aa4.77□□□□□ -1.65
TRAK1-206ENST00000449246 INE1O15225 51 aa4.74□□□□□ -1.65
TRAK1-206ENST00000449246 MT1FP04733 61 aa4.73□□□□□ -1.65
TRAK1-206ENST00000449246 MT1HP80294 61 aa4.73□□□□□ -1.65
TRAK1-206ENST00000449246 MT2AP02795 61 aa4.7□□□□□ -1.66
TRAK1-206ENST00000449246 KRTAP12-3P60328 96 aa4.68□□□□□ -1.66
TRAK1-206ENST00000449246 KMT2DO14686 5537 aa4.67□□□□□ -1.66
TRAK1-206ENST00000449246 KRTAP8-1Q8IUC2 63 aa4.67□□□□□ -1.66
TRAK1-206ENST00000449246 KRTAP9-8Q9BYQ0 159 aa4.63□□□□□ -1.67
TRAK1-206ENST00000449246 KRTAP10-12P60413 245 aa4.63□□□□□ -1.67
TRAK1-206ENST00000449246 KRTAP10-5P60370 271 aa4.57□□□□□ -1.68
TRAK1-206ENST00000449246 MT1BP07438 61 aa4.56□□□□□ -1.68
TRAK1-206ENST00000449246 MT1XP80297 61 aa4.56□□□□□ -1.68
TRAK1-206ENST00000449246 KRTAP10-7P60409 375 aaPredicted RBP4.52□□□□□ -1.69
TRAK1-206ENST00000449246 KRTAP19-8Q3LI54 63 aa4.51□□□□□ -1.69
TRAK1-206ENST00000449246 OBSCNQ5VST9 7968 aa4.44□□□□□ -1.7
TRAK1-206ENST00000449246 KRTAP9-3Q9BYQ3 159 aa4.41□□□□□ -1.7
TRAK1-206ENST00000449246 KRTAP19-5Q3LI72 72 aa4.38□□□□□ -1.71
TRAK1-206ENST00000449246 DSTQ03001 7570 aaKnown RBP4.37□□□□□ -1.71
TRAK1-206ENST00000449246 LCE3CQ5T5A8 94 aa4.36□□□□□ -1.71
TRAK1-206ENST00000449246 KRTAP4-8A0A0G2JLE6 195 aa4.3□□□□□ -1.72
TRAK1-206ENST00000449246 KRTAP4-8Q9BYQ9 185 aa4.3□□□□□ -1.72
TRAK1-206ENST00000449246 KRTAP9-6A8MVA2 160 aa4.23□□□□□ -1.73
TRAK1-206ENST00000449246 KRTAP4-7Q9BYR0 210 aa4.21□□□□□ -1.74
TRAK1-206ENST00000449246 FCGBPQ9Y6R7 5405 aaPredicted RBP4.21□□□□□ -1.74
TRAK1-206ENST00000449246 SYNE1Q8NF91 8797 aaKnown RBP4.19□□□□□ -1.74
TRAK1-206ENST00000449246 MUC12Q9UKN1 5478 aa4.1□□□□□ -1.75
TRAK1-206ENST00000449246 KRTAP2-3P0C7H8 128 aa4.07□□□□□ -1.76
TRAK1-206ENST00000449246 KRTAP2-4Q9BYR9 128 aa4.07□□□□□ -1.76
TRAK1-206ENST00000449246 KRTAP2-1Q9BYU5 128 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms