RNA–Protein interactions for RNA: ENST00000449246.5

TRAK1-206, Transcript of trafficking kinesin protein 1, humanhuman

TSL 1 (best) BASIC

Gene TRAK1, Length 3,260 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-206ENST00000449246 NISCHQ9Y2I1 1504 aa22.86■■□□□ 1.25
TRAK1-206ENST00000449246 SHROOM4Q9ULL8 1493 aa20.31■□□□□ 0.84
TRAK1-206ENST00000449246 SUPT5HO00267 1087 aaKnown RBP20.05■□□□□ 0.8
TRAK1-206ENST00000449246 HRCP23327 699 aa19.77■□□□□ 0.75
TRAK1-206ENST00000449246 PCGF6Q9BYE7 350 aa19.67■□□□□ 0.74
TRAK1-206ENST00000449246 DCAF8L2P0C7V8 631 aa19.63■□□□□ 0.73
TRAK1-206ENST00000449246 PPARGC1BQ86YN6 1023 aaKnown RBP19.56■□□□□ 0.72
TRAK1-206ENST00000449246 CHIC1Q5VXU3 224 aa19.37■□□□□ 0.69
TRAK1-206ENST00000449246 MYO15BQ96JP2 1530 aa19.34■□□□□ 0.69
TRAK1-206ENST00000449246 ZCCHC6Q5VYS8 1495 aaKnown RBP19.33■□□□□ 0.69
TRAK1-206ENST00000449246 LOC105371045A0A1W2PR82 267 aa19.06■□□□□ 0.64
TRAK1-206ENST00000449246 CCDC180Q9P1Z9 1646 aa18.99■□□□□ 0.63
TRAK1-206ENST00000449246 PELP1Q8IZL8 1130 aaKnown RBP18.91■□□□□ 0.62
TRAK1-206ENST00000449246 TRIM26Q12899 539 aaPredicted RBP18.87■□□□□ 0.61
TRAK1-206ENST00000449246 DCAF1Q9Y4B6 1507 aa18.72■□□□□ 0.59
TRAK1-206ENST00000449246 EHMT2Q96KQ7 1210 aa18.69■□□□□ 0.58
TRAK1-206ENST00000449246 SCAF1Q9H7N4 1312 aaKnown RBP18.68■□□□□ 0.58
TRAK1-206ENST00000449246 ZEB1P37275 1124 aaPredicted RBP18.67■□□□□ 0.58
TRAK1-206ENST00000449246 FAM9AQ8IZU1 332 aaPredicted RBP18.62■□□□□ 0.57
TRAK1-206ENST00000449246 TRIM41Q8WV44 630 aa18.47■□□□□ 0.55
TRAK1-206ENST00000449246 RSF1Q96T23 1441 aaPredicted RBP18.33■□□□□ 0.52
TRAK1-206ENST00000449246 SCRIBQ14160 1630 aa18.32■□□□□ 0.52
TRAK1-206ENST00000449246 ACIN1Q9UKV3 1341 aaKnown RBP18.27■□□□□ 0.52
TRAK1-206ENST00000449246 NEUROD1Q13562 356 aa18.27■□□□□ 0.52
TRAK1-206ENST00000449246 CCER1Q8TC90 406 aaPredicted RBP18.27■□□□□ 0.51
TRAK1-206ENST00000449246 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.26■□□□□ 0.51
TRAK1-206ENST00000449246 ABCC9O60706 1549 aa18.25■□□□□ 0.51
TRAK1-206ENST00000449246 GTF3C3Q9Y5Q9 886 aa18.24■□□□□ 0.51
TRAK1-206ENST00000449246 CENPBP07199 599 aaPredicted RBP18.2■□□□□ 0.5
TRAK1-206ENST00000449246 RB1CC1Q8TDY2 1594 aa18.18■□□□□ 0.5
TRAK1-206ENST00000449246 TTBK1Q5TCY1 1321 aaPredicted RBP18.16■□□□□ 0.5
TRAK1-206ENST00000449246 DIEXFQ68CQ4 756 aaKnown RBP18.12■□□□□ 0.49
TRAK1-206ENST00000449246 MYT1Q01538 1121 aa18.11■□□□□ 0.49
TRAK1-206ENST00000449246 CECR2Q9BXF3 1484 aa18.06■□□□□ 0.48
TRAK1-206ENST00000449246 YTHDC1Q96MU7 727 aaKnown RBP18.05■□□□□ 0.48
TRAK1-206ENST00000449246 MROH2BQ7Z745 1585 aa17.93■□□□□ 0.46
TRAK1-206ENST00000449246 WIZO95785 1651 aa17.83■□□□□ 0.44
TRAK1-206ENST00000449246 ZNF316A6NFI3 1004 aaPredicted RBP17.73■□□□□ 0.43
TRAK1-206ENST00000449246 ABCC8Q09428 1581 aa17.65■□□□□ 0.42
TRAK1-206ENST00000449246 MIER1Q8N108 512 aa17.64■□□□□ 0.41
TRAK1-206ENST00000449246 NACADO15069 1562 aa17.64■□□□□ 0.41
TRAK1-206ENST00000449246 UBTFP17480 764 aaKnown RBP17.64■□□□□ 0.41
TRAK1-206ENST00000449246 CCDC88BA6NC98 1476 aa17.63■□□□□ 0.41
TRAK1-206ENST00000449246 SOGA1O94964 1423 aa17.58■□□□□ 0.41
TRAK1-206ENST00000449246 HNRNPUL2Q1KMD3 747 aaKnown RBP17.58■□□□□ 0.41
TRAK1-206ENST00000449246 CEP162Q5TB80 1403 aa17.53■□□□□ 0.4
TRAK1-206ENST00000449246 RANGAP1P46060 587 aaPredicted RBP17.53■□□□□ 0.4
TRAK1-206ENST00000449246 BAZ1AQ9NRL2 1556 aaPredicted RBP17.52■□□□□ 0.4
TRAK1-206ENST00000449246 RUSC2Q8N2Y8 1516 aa17.51■□□□□ 0.39
TRAK1-206ENST00000449246 PABPN1Q86U42 306 aaKnown RBP eCLIP17.49■□□□□ 0.39
TRAK1-206ENST00000449246 CSRNP3Q8WYN3 585 aa17.49■□□□□ 0.39
TRAK1-206ENST00000449246 EIF4G1Q04637 1599 aaKnown RBP17.45■□□□□ 0.38
TRAK1-206ENST00000449246 TNIKQ9UKE5 1360 aa17.38■□□□□ 0.37
TRAK1-206ENST00000449246 TOP2AP11388 1531 aaKnown RBP17.37■□□□□ 0.37
TRAK1-206ENST00000449246 WRNQ14191 1432 aaPredicted RBP eCLIP17.37■□□□□ 0.37
TRAK1-206ENST00000449246 SMARCA2P51531 1590 aa17.35■□□□□ 0.37
TRAK1-206ENST00000449246 APLP2Q06481 763 aa17.33■□□□□ 0.36
TRAK1-206ENST00000449246 SMARCA4P51532 1647 aa17.32■□□□□ 0.36
TRAK1-206ENST00000449246 SUPT16HQ9Y5B9 1047 aaKnown RBP17.27■□□□□ 0.36
TRAK1-206ENST00000449246 GOLGA3Q08378 1498 aa17.22■□□□□ 0.35
TRAK1-206ENST00000449246 BCANQ96GW7 911 aa17.22■□□□□ 0.35
TRAK1-206ENST00000449246 EEA1Q15075 1411 aa17.17■□□□□ 0.34
TRAK1-206ENST00000449246 ANP32EQ9BTT0 268 aa17.16■□□□□ 0.34
TRAK1-206ENST00000449246 CLIP1P30622 1438 aa17.16■□□□□ 0.34
TRAK1-206ENST00000449246 TSHZ2Q9NRE2 1034 aa17.15■□□□□ 0.34
TRAK1-206ENST00000449246 UNC13AQ9UPW8 1703 aa17.09■□□□□ 0.33
TRAK1-206ENST00000449246 BCL11AQ9H165 835 aa17.08■□□□□ 0.32
TRAK1-206ENST00000449246 CLSPNQ9HAW4 1339 aa17.08■□□□□ 0.32
TRAK1-206ENST00000449246 SYNJ1O43426 1573 aa17.08■□□□□ 0.32
TRAK1-206ENST00000449246 CEP164Q9UPV0 1460 aa17.07■□□□□ 0.32
TRAK1-206ENST00000449246 RAPGEF2Q9Y4G8 1499 aa17.07■□□□□ 0.32
TRAK1-206ENST00000449246 ITGAEP38570 1179 aa17.02■□□□□ 0.32
TRAK1-206ENST00000449246 VPS8Q8N3P4 1428 aa17.02■□□□□ 0.32
TRAK1-206ENST00000449246 FKBP8Q14318 412 aa17.01■□□□□ 0.31
TRAK1-206ENST00000449246 KANK4Q5T7N3 995 aaPredicted RBP17■□□□□ 0.31
TRAK1-206ENST00000449246 KCNH8Q96L42 1107 aa16.99■□□□□ 0.31
TRAK1-206ENST00000449246 BICRAQ9NZM4 1560 aa16.96■□□□□ 0.3
TRAK1-206ENST00000449246 NEFLP07196 543 aa16.95■□□□□ 0.3
TRAK1-206ENST00000449246 KIF21BO75037 1637 aa16.92■□□□□ 0.3
TRAK1-206ENST00000449246 ATAD2BQ9ULI0 1458 aa16.91■□□□□ 0.3
TRAK1-206ENST00000449246 BAZ1BQ9UIG0 1483 aaKnown RBP16.91■□□□□ 0.3
TRAK1-206ENST00000449246 DHX57Q6P158 1386 aaKnown RBP16.87■□□□□ 0.29
TRAK1-206ENST00000449246 DDX10Q13206 875 aaKnown RBP16.86■□□□□ 0.29
TRAK1-206ENST00000449246 TRIM52Q96A61 297 aa16.83■□□□□ 0.29
TRAK1-206ENST00000449246 RBM19Q9Y4C8 960 aaKnown RBP16.83■□□□□ 0.28
TRAK1-206ENST00000449246 ERICH6Q7L0X2 663 aa16.8■□□□□ 0.28
TRAK1-206ENST00000449246 PEG3Q9GZU2 1588 aa16.79■□□□□ 0.28
TRAK1-206ENST00000449246 HIRIP3Q9BW71 556 aaPredicted RBP16.78■□□□□ 0.28
TRAK1-206ENST00000449246 ARAP1Q96P48 1450 aa16.77■□□□□ 0.27
TRAK1-206ENST00000449246 ATP1B4Q9UN42 357 aaPredicted RBP16.74■□□□□ 0.27
TRAK1-206ENST00000449246 TOP2BQ02880 1626 aa16.7■□□□□ 0.26
TRAK1-206ENST00000449246 PRXQ9BXM0 1461 aa16.7■□□□□ 0.26
TRAK1-206ENST00000449246 P3H3Q8IVL6 736 aa16.7■□□□□ 0.26
TRAK1-206ENST00000449246 SIN3AQ96ST3 1273 aa16.67■□□□□ 0.26
TRAK1-206ENST00000449246 CCNB3Q8WWL7 1395 aa16.67■□□□□ 0.26
TRAK1-206ENST00000449246 IRX6P78412 446 aaPredicted RBP16.67■□□□□ 0.26
TRAK1-206ENST00000449246 ANP32CO43423 234 aa16.66■□□□□ 0.26
TRAK1-206ENST00000449246 FAM50AQ14320 339 aaKnown RBP16.66■□□□□ 0.26
TRAK1-206ENST00000449246 KIF27Q86VH2 1401 aa16.63■□□□□ 0.25
TRAK1-206ENST00000449246 CUX1P39880 1505 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms