RNA–Protein interactions for RNA: ENST00000449193.6

SKIDA1-202, Transcript of SKI/DACH domain containing 1, humanhuman

APPRIS P2 TSL 3 BASIC

Gene SKIDA1, Length 6,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKIDA1-202ENST00000449193 MT1HP80294 61 aa7.17□□□□□ -1.26
SKIDA1-202ENST00000449193 KRTAP4-1Q9BYQ7 146 aa7.1□□□□□ -1.27
SKIDA1-202ENST00000449193 MT2AP02795 61 aa7.06□□□□□ -1.28
SKIDA1-202ENST00000449193 MUC3AQ02505 3323 aa7.02□□□□□ -1.29
SKIDA1-202ENST00000449193 DNAH5Q8TE73 4624 aa6.99□□□□□ -1.29
SKIDA1-202ENST00000449193 SPRR2GQ9BYE4 73 aa6.99□□□□□ -1.29
SKIDA1-202ENST00000449193 DNAH1Q9P2D7 4330 aa6.95□□□□□ -1.3
SKIDA1-202ENST00000449193 KRTAP10-7P60409 375 aaPredicted RBP6.94□□□□□ -1.3
SKIDA1-202ENST00000449193 SPRR2FQ96RM1 72 aa6.94□□□□□ -1.3
SKIDA1-202ENST00000449193 DNAH9Q9NYC9 4486 aa6.93□□□□□ -1.3
SKIDA1-202ENST00000449193 PLECQ15149 4684 aaKnown RBP6.9□□□□□ -1.31
SKIDA1-202ENST00000449193 CSMD3Q7Z407 3707 aa6.89□□□□□ -1.31
SKIDA1-202ENST00000449193 DNAH10Q8IVF4 4471 aa6.87□□□□□ -1.31
SKIDA1-202ENST00000449193 MT1FP04733 61 aa6.87□□□□□ -1.31
SKIDA1-202ENST00000449193 BSNQ9UPA5 3926 aa6.86□□□□□ -1.31
SKIDA1-202ENST00000449193 DNAH2Q9P225 4427 aa6.85□□□□□ -1.31
SKIDA1-202ENST00000449193 DNAH11Q96DT5 4516 aa6.84□□□□□ -1.31
SKIDA1-202ENST00000449193 KRTAP19-5Q3LI72 72 aa6.79□□□□□ -1.32
SKIDA1-202ENST00000449193 VPS13CQ709C8 3753 aa6.75□□□□□ -1.33
SKIDA1-202ENST00000449193 KRTAP19-4Q3LI73 84 aa6.71□□□□□ -1.34
SKIDA1-202ENST00000449193 LCE3CQ5T5A8 94 aa6.69□□□□□ -1.34
SKIDA1-202ENST00000449193 FAT1Q14517 4588 aa6.65□□□□□ -1.35
SKIDA1-202ENST00000449193 DNAH17Q9UFH2 4485 aa6.58□□□□□ -1.36
SKIDA1-202ENST00000449193 DYNC1H1Q14204 4646 aaKnown RBP6.56□□□□□ -1.36
SKIDA1-202ENST00000449193 SPRR2EP22531 72 aa6.56□□□□□ -1.36
SKIDA1-202ENST00000449193 SPRR2BP35325 72 aa6.56□□□□□ -1.36
SKIDA1-202ENST00000449193 SPRR2AP35326 72 aa6.56□□□□□ -1.36
SKIDA1-202ENST00000449193 VPS13DQ5THJ4 4388 aa6.55□□□□□ -1.36
SKIDA1-202ENST00000449193 LRP1BQ9NZR2 4599 aa6.5□□□□□ -1.37
SKIDA1-202ENST00000449193 FAT2Q9NYQ8 4349 aa6.49□□□□□ -1.37
SKIDA1-202ENST00000449193 DNHD1Q96M86 4753 aa6.48□□□□□ -1.37
SKIDA1-202ENST00000449193 KRTAP19-8Q3LI54 63 aa6.47□□□□□ -1.37
SKIDA1-202ENST00000449193 RYR1P21817 5038 aa6.46□□□□□ -1.37
SKIDA1-202ENST00000449193 SACSQ9NZJ4 4579 aa6.43□□□□□ -1.38
SKIDA1-202ENST00000449193 AKAP9Q99996 3911 aa6.43□□□□□ -1.38
SKIDA1-202ENST00000449193 DYNC2H1Q8NCM8 4307 aaKnown RBP6.4□□□□□ -1.38
SKIDA1-202ENST00000449193 SPRR2DP22532 72 aa6.36□□□□□ -1.39
SKIDA1-202ENST00000449193 KRTAP19-1Q8IUB9 90 aa6.36□□□□□ -1.39
SKIDA1-202ENST00000449193 DNAH8Q96JB1 4490 aa6.32□□□□□ -1.4
SKIDA1-202ENST00000449193 LCE2BO14633 110 aa6.31□□□□□ -1.4
SKIDA1-202ENST00000449193 DNAH3Q8TD57 4116 aa6.29□□□□□ -1.4
SKIDA1-202ENST00000449193 LCE3BQ5TA77 95 aa6.27□□□□□ -1.41
SKIDA1-202ENST00000449193 MT1XP80297 61 aa6.26□□□□□ -1.41
SKIDA1-202ENST00000449193 KRTAP12-4P60329 112 aa6.25□□□□□ -1.41
SKIDA1-202ENST00000449193 APOBP04114 4563 aaKnown RBP6.24□□□□□ -1.41
SKIDA1-202ENST00000449193 STARD9Q9P2P6 4700 aa6.24□□□□□ -1.41
SKIDA1-202ENST00000449193 ZNF469Q96JG9 3925 aaPredicted RBP6.23□□□□□ -1.41
SKIDA1-202ENST00000449193 LRP1Q07954 4544 aaKnown RBP6.22□□□□□ -1.41
SKIDA1-202ENST00000449193 MT1GP13640 62 aa6.2□□□□□ -1.42
SKIDA1-202ENST00000449193 MT1BP07438 61 aa6.19□□□□□ -1.42
SKIDA1-202ENST00000449193 RYR3Q15413 4870 aa6.18□□□□□ -1.42
SKIDA1-202ENST00000449193 KRTAP9-8Q9BYQ0 159 aa6.15□□□□□ -1.42
SKIDA1-202ENST00000449193 FAT3Q8TDW7 4589 aa6.14□□□□□ -1.43
SKIDA1-202ENST00000449193 KRTAP17-1Q9BYP8 105 aa6.14□□□□□ -1.43
SKIDA1-202ENST00000449193 VPS13BQ7Z7G8 4022 aa6.1□□□□□ -1.43
SKIDA1-202ENST00000449193 HERC1Q15751 4861 aa6.08□□□□□ -1.44
SKIDA1-202ENST00000449193 KRTAP9-3Q9BYQ3 159 aa6.05□□□□□ -1.44
SKIDA1-202ENST00000449193 ANK2Q01484 3957 aa6.05□□□□□ -1.44
SKIDA1-202ENST00000449193 KRTAP4-8A0A0G2JLE6 195 aa6.04□□□□□ -1.44
SKIDA1-202ENST00000449193 KRTAP4-8Q9BYQ9 185 aa6.04□□□□□ -1.44
SKIDA1-202ENST00000449193 PRKDCP78527 4128 aaKnown RBP6.03□□□□□ -1.44
SKIDA1-202ENST00000449193 DNAH6Q9C0G6 4158 aa5.98□□□□□ -1.45
SKIDA1-202ENST00000449193 DNAH7Q8WXX0 4024 aa5.97□□□□□ -1.45
SKIDA1-202ENST00000449193 LCE2CQ5TA81 110 aa5.96□□□□□ -1.46
SKIDA1-202ENST00000449193 LCE3DQ9BYE3 92 aa5.94□□□□□ -1.46
SKIDA1-202ENST00000449193 RYR2Q92736 4967 aa5.93□□□□□ -1.46
SKIDA1-202ENST00000449193 KMT2AQ03164 3969 aa5.91□□□□□ -1.46
SKIDA1-202ENST00000449193 HSPG2P98160 4391 aa5.9□□□□□ -1.46
SKIDA1-202ENST00000449193 FRAS1Q86XX4 4008 aa5.89□□□□□ -1.47
SKIDA1-202ENST00000449193 KRTAP19-3Q7Z4W3 81 aa5.88□□□□□ -1.47
SKIDA1-202ENST00000449193 CMYA5Q8N3K9 4069 aa5.88□□□□□ -1.47
SKIDA1-202ENST00000449193 KIAA1109Q2LD37 5005 aa5.86□□□□□ -1.47
SKIDA1-202ENST00000449193 LCE3EQ5T5B0 92 aa5.84□□□□□ -1.47
SKIDA1-202ENST00000449193 LCE2DQ5TA82 110 aaPredicted RBP5.83□□□□□ -1.48
SKIDA1-202ENST00000449193 PKD1P98161 4303 aa5.81□□□□□ -1.48
SKIDA1-202ENST00000449193 MYCBP2O75592 4640 aa5.8□□□□□ -1.48
SKIDA1-202ENST00000449193 LYSTQ99698 3801 aa5.8□□□□□ -1.48
SKIDA1-202ENST00000449193 SPRR5A0A1B0GTR4 108 aa5.76□□□□□ -1.49
SKIDA1-202ENST00000449193 MT1LQ93083 61 aa5.75□□□□□ -1.49
SKIDA1-202ENST00000449193 PKHD1L1Q86WI1 4243 aa5.73□□□□□ -1.49
SKIDA1-202ENST00000449193 BIRC6Q9NR09 4857 aa5.71□□□□□ -1.5
SKIDA1-202ENST00000449193 MT1EP04732 61 aa5.7□□□□□ -1.5
SKIDA1-202ENST00000449193 HERC2O95714 4834 aa5.67□□□□□ -1.5
SKIDA1-202ENST00000449193 PCLOQ9Y6V0 5065 aa5.63□□□□□ -1.51
SKIDA1-202ENST00000449193 KRTAP4-7Q9BYR0 210 aa5.62□□□□□ -1.51
SKIDA1-202ENST00000449193 MT3P25713 68 aa5.6□□□□□ -1.51
SKIDA1-202ENST00000449193 MT4P47944 62 aa5.59□□□□□ -1.51
SKIDA1-202ENST00000449193 KRTAP9-2Q9BYQ4 174 aa5.58□□□□□ -1.52
SKIDA1-202ENST00000449193 KRTAP19-6Q3LI70 58 aa5.57□□□□□ -1.52
SKIDA1-202ENST00000449193 MT1MQ8N339 61 aa5.56□□□□□ -1.52
SKIDA1-202ENST00000449193 KRTAP19-2Q3LHN2 52 aa5.55□□□□□ -1.52
SKIDA1-202ENST00000449193 HECTD4Q9Y4D8 3996 aa5.48□□□□□ -1.53
SKIDA1-202ENST00000449193 LRP2P98164 4655 aa5.46□□□□□ -1.54
SKIDA1-202ENST00000449193 EPPK1P58107 5090 aaKnown RBP5.41□□□□□ -1.54
SKIDA1-202ENST00000449193 LCE1BQ5T7P3 118 aa5.37□□□□□ -1.55
SKIDA1-202ENST00000449193 LCE1DQ5T752 114 aa5.34□□□□□ -1.55
SKIDA1-202ENST00000449193 KRTAP9-6A0A140TA67 174 aa5.34□□□□□ -1.55
SKIDA1-202ENST00000449193 LPAP08519 4548 aa5.33□□□□□ -1.56
SKIDA1-202ENST00000449193 LOC100996750A0A140TA64 210 aa5.32□□□□□ -1.56
SKIDA1-202ENST00000449193 PKHD1P08F94 4074 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms