RNA–Protein interactions for RNA: ENST00000447510.6

PROM1-201, Transcript of prominin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PROM1, Length 3,977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-201ENST00000447510 KRTAP25-1Q3LHN0 102 aa3.35□□□□□ -1.87
PROM1-201ENST00000447510 C9orf92A6NGG3 77 aa3.35□□□□□ -1.87
PROM1-201ENST00000447510 VPS13BQ7Z7G8 4022 aa3.34□□□□□ -1.87
PROM1-201ENST00000447510 K7ERS5 55 aa3.33□□□□□ -1.88
PROM1-201ENST00000447510 A8MUU9 505 aa3.32□□□□□ -1.88
PROM1-201ENST00000447510 MT1HL1P0DM35 61 aa3.32□□□□□ -1.88
PROM1-201ENST00000447510 RPS29P62273 56 aaKnown RBP3.32□□□□□ -1.88
PROM1-201ENST00000447510 HERC2O95714 4834 aa3.3□□□□□ -1.88
PROM1-201ENST00000447510 NDUFAF8A1L188 74 aa3.28□□□□□ -1.88
PROM1-201ENST00000447510 A0A1B0GU33 70 aa3.28□□□□□ -1.88
PROM1-201ENST00000447510 A0A0A0MQY5 61 aa3.27□□□□□ -1.89
PROM1-201ENST00000447510 P0C880 135 aa3.27□□□□□ -1.89
PROM1-201ENST00000447510 KRTAP13-3Q3SY46 172 aa3.27□□□□□ -1.89
PROM1-201ENST00000447510 LRP1Q07954 4544 aaKnown RBP3.26□□□□□ -1.89
PROM1-201ENST00000447510 H0YAA0 97 aa3.26□□□□□ -1.89
PROM1-201ENST00000447510 ABCA13Q86UQ4 5058 aa3.26□□□□□ -1.89
PROM1-201ENST00000447510 A0A0D9SG42 100 aa3.25□□□□□ -1.89
PROM1-201ENST00000447510 MYCBP2O75592 4640 aa3.25□□□□□ -1.89
PROM1-201ENST00000447510 SEC61BP60468 96 aaKnown RBP3.22□□□□□ -1.89
PROM1-201ENST00000447510 TPRXLQ17RH7 258 aa3.21□□□□□ -1.9
PROM1-201ENST00000447510 C10orf95Q9H7T3 257 aa3.21□□□□□ -1.9
PROM1-201ENST00000447510 H1FX-AS1Q4G0G2 97 aa3.2□□□□□ -1.9
PROM1-201ENST00000447510 FAT3Q8TDW7 4589 aa3.2□□□□□ -1.9
PROM1-201ENST00000447510 KRTAP16-1A8MUX0 517 aa3.19□□□□□ -1.9
PROM1-201ENST00000447510 PCLOQ9Y6V0 5065 aa3.19□□□□□ -1.9
PROM1-201ENST00000447510 XP32Q5T750 250 aa3.19□□□□□ -1.9
PROM1-201ENST00000447510 C20orf166-AS1Q96NR2 134 aa3.19□□□□□ -1.9
PROM1-201ENST00000447510 RPL37P61927 97 aaKnown RBP3.16□□□□□ -1.9
PROM1-201ENST00000447510 COX6B2Q6YFQ2 88 aa3.16□□□□□ -1.9
PROM1-201ENST00000447510 PKHD1L1Q86WI1 4243 aa3.15□□□□□ -1.91
PROM1-201ENST00000447510 TNXBP22105 4242 aa3.12□□□□□ -1.91
PROM1-201ENST00000447510 HERC1Q15751 4861 aa3.1□□□□□ -1.91
PROM1-201ENST00000447510 LUZP6Q538Z0 58 aa3.1□□□□□ -1.91
PROM1-201ENST00000447510 M0R2T5 61 aa3.05□□□□□ -1.92
PROM1-201ENST00000447510 KRTAP15-1Q3LI76 137 aa3.04□□□□□ -1.92
PROM1-201ENST00000447510 LRP2P98164 4655 aa3.04□□□□□ -1.92
PROM1-201ENST00000447510 KRTAP3-1Q9BYR8 98 aa3.04□□□□□ -1.92
PROM1-201ENST00000447510 LCE2BO14633 110 aa3.04□□□□□ -1.92
PROM1-201ENST00000447510 KRTAP13-4Q3LI77 160 aa3.02□□□□□ -1.93
PROM1-201ENST00000447510 HMCN2Q8NDA2 5059 aa3.01□□□□□ -1.93
PROM1-201ENST00000447510 LPAP08519 4548 aa3.01□□□□□ -1.93
PROM1-201ENST00000447510 S4R3F8 94 aa3.01□□□□□ -1.93
PROM1-201ENST00000447510 KRTAP12-2P59991 146 aa2.97□□□□□ -1.93
PROM1-201ENST00000447510 KRTAP4-1Q9BYQ7 146 aa2.96□□□□□ -1.93
PROM1-201ENST00000447510 KRTAP10-6P60371 365 aaPredicted RBP2.95□□□□□ -1.94
PROM1-201ENST00000447510 UBR4Q5T4S7 5183 aa2.94□□□□□ -1.94
PROM1-201ENST00000447510 LCE2CQ5TA81 110 aa2.93□□□□□ -1.94
PROM1-201ENST00000447510 RNF213Q63HN8 5207 aa2.92□□□□□ -1.94
PROM1-201ENST00000447510 LCE2AQ5TA79 106 aaPredicted RBP2.92□□□□□ -1.94
PROM1-201ENST00000447510 PLAC4Q8WY50 150 aa2.92□□□□□ -1.94
PROM1-201ENST00000447510 KRTAP23-1A1A580 65 aa2.89□□□□□ -1.95
PROM1-201ENST00000447510 KRTAP12-1P59990 96 aa2.88□□□□□ -1.95
PROM1-201ENST00000447510 M0QZ58 72 aa2.85□□□□□ -1.95
PROM1-201ENST00000447510 MUC2Q02817 5179 aa2.85□□□□□ -1.95
PROM1-201ENST00000447510 MUC17Q685J3 4493 aa2.84□□□□□ -1.95
PROM1-201ENST00000447510 R4GN34 69 aa2.83□□□□□ -1.96
PROM1-201ENST00000447510 KRTAP10-10P60014 251 aa2.82□□□□□ -1.96
PROM1-201ENST00000447510 MT1HP80294 61 aa2.82□□□□□ -1.96
PROM1-201ENST00000447510 FAT4Q6V0I7 4981 aa2.79□□□□□ -1.96
PROM1-201ENST00000447510 CAMK2N1Q7Z7J9 78 aa2.79□□□□□ -1.96
PROM1-201ENST00000447510 KRTAP19-2Q3LHN2 52 aa2.78□□□□□ -1.96
PROM1-201ENST00000447510 FLGP20930 4061 aaPredicted RBP2.73□□□□□ -1.97
PROM1-201ENST00000447510 LORP23490 312 aaPredicted RBP2.72□□□□□ -1.97
PROM1-201ENST00000447510 MT2AP02795 61 aa2.69□□□□□ -1.98
PROM1-201ENST00000447510 MT1FP04733 61 aa2.67□□□□□ -1.98
PROM1-201ENST00000447510 PP632Q6XCG6 107 aa2.65□□□□□ -1.98
PROM1-201ENST00000447510 KRTAP9-8Q9BYQ0 159 aa2.65□□□□□ -1.98
PROM1-201ENST00000447510 KRTAP19-4Q3LI73 84 aa2.64□□□□□ -1.99
PROM1-201ENST00000447510 TNP1P09430 55 aa2.6□□□□□ -1.99
PROM1-201ENST00000447510 PRO2289Q9P1D8 64 aa2.57□□□□□ -2
PROM1-201ENST00000447510 KRTAP9-3Q9BYQ3 159 aa2.57□□□□□ -2
PROM1-201ENST00000447510 KRTAP9-2Q9BYQ4 174 aa2.57□□□□□ -2
PROM1-201ENST00000447510 FSIP2Q5CZC0 6907 aa2.56□□□□□ -2
PROM1-201ENST00000447510 SPRR2GQ9BYE4 73 aa2.56□□□□□ -2
PROM1-201ENST00000447510 KRTAP19-1Q8IUB9 90 aa2.54□□□□□ -2
PROM1-201ENST00000447510 KRTAP19-8Q3LI54 63 aa2.49□□□□□ -2.01
PROM1-201ENST00000447510 CRCT1Q9UGL9 99 aa2.48□□□□□ -2.01
PROM1-201ENST00000447510 MT1BP07438 61 aa2.47□□□□□ -2.01
PROM1-201ENST00000447510 USH2AO75445 5202 aa2.46□□□□□ -2.02
PROM1-201ENST00000447510 INE1O15225 51 aa2.45□□□□□ -2.02
PROM1-201ENST00000447510 KRTAP9-6A0A140TA67 174 aa2.43□□□□□ -2.02
PROM1-201ENST00000447510 SPRR5A0A1B0GTR4 108 aa2.43□□□□□ -2.02
PROM1-201ENST00000447510 KRTAP10-5P60370 271 aa2.4□□□□□ -2.03
PROM1-201ENST00000447510 KRTAP19-6Q3LI70 58 aa2.4□□□□□ -2.03
PROM1-201ENST00000447510 LCE3AQ5TA76 89 aa2.39□□□□□ -2.03
PROM1-201ENST00000447510 SSPOA2VEC9 5147 aa2.38□□□□□ -2.03
PROM1-201ENST00000447510 MT1XP80297 61 aa2.37□□□□□ -2.03
PROM1-201ENST00000447510 KRTAP10-12P60413 245 aa2.33□□□□□ -2.04
PROM1-201ENST00000447510 FCGBPQ9Y6R7 5405 aaPredicted RBP2.32□□□□□ -2.04
PROM1-201ENST00000447510 KRTAP8-1Q8IUC2 63 aa2.32□□□□□ -2.04
PROM1-201ENST00000447510 KRTAP10-7P60409 375 aaPredicted RBP2.3□□□□□ -2.04
PROM1-201ENST00000447510 LOC100996750A0A140TA64 210 aa2.28□□□□□ -2.04
PROM1-201ENST00000447510 KRTAP4-6Q9BYQ5 205 aa2.28□□□□□ -2.04
PROM1-201ENST00000447510 KRTAP12-3P60328 96 aa2.26□□□□□ -2.05
PROM1-201ENST00000447510 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.26□□□□□ -2.05
PROM1-201ENST00000447510 SPRR2FQ96RM1 72 aa2.26□□□□□ -2.05
PROM1-201ENST00000447510 KRTAP4-8A0A0G2JLE6 195 aa2.26□□□□□ -2.05
PROM1-201ENST00000447510 KRTAP4-8Q9BYQ9 185 aa2.26□□□□□ -2.05
PROM1-201ENST00000447510 SYNE2Q8WXH0 6885 aaKnown RBP2.23□□□□□ -2.05
PROM1-201ENST00000447510 MACF1Q9UPN3 7388 aaKnown RBP2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 137.7 ms