RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 KRTAP12-3P60328 96 aa8.09□□□□□ -1.11
SHANK3-203ENST00000445220 DNAH9Q9NYC9 4486 aa8□□□□□ -1.13
SHANK3-203ENST00000445220 LCE3AQ5TA76 89 aa7.98□□□□□ -1.13
SHANK3-203ENST00000445220 CRCT1Q9UGL9 99 aa7.87□□□□□ -1.15
SHANK3-203ENST00000445220 LORP23490 312 aaPredicted RBP7.84□□□□□ -1.15
SHANK3-203ENST00000445220 DNAH11Q96DT5 4516 aa7.83□□□□□ -1.16
SHANK3-203ENST00000445220 DNAH5Q8TE73 4624 aa7.81□□□□□ -1.16
SHANK3-203ENST00000445220 PLECQ15149 4684 aaKnown RBP7.77□□□□□ -1.16
SHANK3-203ENST00000445220 CSMD3Q7Z407 3707 aa7.77□□□□□ -1.17
SHANK3-203ENST00000445220 DNAH1Q9P2D7 4330 aa7.76□□□□□ -1.17
SHANK3-203ENST00000445220 KRTAP17-1Q9BYP8 105 aa7.74□□□□□ -1.17
SHANK3-203ENST00000445220 RYR1P21817 5038 aa7.67□□□□□ -1.18
SHANK3-203ENST00000445220 VPS13DQ5THJ4 4388 aa7.66□□□□□ -1.18
SHANK3-203ENST00000445220 BIRC6Q9NR09 4857 aa7.62□□□□□ -1.19
SHANK3-203ENST00000445220 DNAH17Q9UFH2 4485 aa7.59□□□□□ -1.19
SHANK3-203ENST00000445220 DNAH10Q8IVF4 4471 aa7.59□□□□□ -1.19
SHANK3-203ENST00000445220 KRTAP10-5P60370 271 aa7.58□□□□□ -1.2
SHANK3-203ENST00000445220 DYNC1H1Q14204 4646 aaKnown RBP7.54□□□□□ -1.2
SHANK3-203ENST00000445220 PRKDCP78527 4128 aaKnown RBP7.53□□□□□ -1.2
SHANK3-203ENST00000445220 DNAH2Q9P225 4427 aa7.51□□□□□ -1.21
SHANK3-203ENST00000445220 STARD9Q9P2P6 4700 aa7.51□□□□□ -1.21
SHANK3-203ENST00000445220 KIAA1109Q2LD37 5005 aa7.49□□□□□ -1.21
SHANK3-203ENST00000445220 RYR3Q15413 4870 aa7.47□□□□□ -1.21
SHANK3-203ENST00000445220 ANK2Q01484 3957 aa7.47□□□□□ -1.21
SHANK3-203ENST00000445220 KRTAP4-1Q9BYQ7 146 aa7.45□□□□□ -1.22
SHANK3-203ENST00000445220 MT1HP80294 61 aa7.43□□□□□ -1.22
SHANK3-203ENST00000445220 DNAH3Q8TD57 4116 aa7.41□□□□□ -1.22
SHANK3-203ENST00000445220 LRP1BQ9NZR2 4599 aa7.38□□□□□ -1.23
SHANK3-203ENST00000445220 SPRR2GQ9BYE4 73 aa7.32□□□□□ -1.24
SHANK3-203ENST00000445220 FAT1Q14517 4588 aa7.32□□□□□ -1.24
SHANK3-203ENST00000445220 KRTAP8-1Q8IUC2 63 aa7.32□□□□□ -1.24
SHANK3-203ENST00000445220 DYNC2H1Q8NCM8 4307 aaKnown RBP7.3□□□□□ -1.24
SHANK3-203ENST00000445220 DNAH8Q96JB1 4490 aa7.28□□□□□ -1.24
SHANK3-203ENST00000445220 MT2AP02795 61 aa7.28□□□□□ -1.24
SHANK3-203ENST00000445220 HERC2O95714 4834 aa7.27□□□□□ -1.25
SHANK3-203ENST00000445220 FAT2Q9NYQ8 4349 aa7.24□□□□□ -1.25
SHANK3-203ENST00000445220 SACSQ9NZJ4 4579 aa7.23□□□□□ -1.25
SHANK3-203ENST00000445220 RYR2Q92736 4967 aa7.21□□□□□ -1.26
SHANK3-203ENST00000445220 KMT2AQ03164 3969 aa7.2□□□□□ -1.26
SHANK3-203ENST00000445220 CMYA5Q8N3K9 4069 aa7.19□□□□□ -1.26
SHANK3-203ENST00000445220 MT1FP04733 61 aa7.1□□□□□ -1.27
SHANK3-203ENST00000445220 LCE3CQ5T5A8 94 aa7.08□□□□□ -1.28
SHANK3-203ENST00000445220 VPS13BQ7Z7G8 4022 aa7.04□□□□□ -1.28
SHANK3-203ENST00000445220 PCLOQ9Y6V0 5065 aa7.03□□□□□ -1.28
SHANK3-203ENST00000445220 DNAH6Q9C0G6 4158 aa7.03□□□□□ -1.28
SHANK3-203ENST00000445220 HYDINQ4G0P3 5121 aa7.01□□□□□ -1.29
SHANK3-203ENST00000445220 KRTAP19-5Q3LI72 72 aa7.01□□□□□ -1.29
SHANK3-203ENST00000445220 KRTAP19-4Q3LI73 84 aa6.97□□□□□ -1.29
SHANK3-203ENST00000445220 SPRR2FQ96RM1 72 aa6.97□□□□□ -1.29
SHANK3-203ENST00000445220 APOBP04114 4563 aaKnown RBP6.96□□□□□ -1.3
SHANK3-203ENST00000445220 LYSTQ99698 3801 aa6.95□□□□□ -1.3
SHANK3-203ENST00000445220 DNAH7Q8WXX0 4024 aa6.92□□□□□ -1.3
SHANK3-203ENST00000445220 HECTD4Q9Y4D8 3996 aa6.91□□□□□ -1.3
SHANK3-203ENST00000445220 KRTAP9-2Q9BYQ4 174 aa6.9□□□□□ -1.3
SHANK3-203ENST00000445220 FRAS1Q86XX4 4008 aa6.88□□□□□ -1.31
SHANK3-203ENST00000445220 KRTAP19-8Q3LI54 63 aa6.85□□□□□ -1.31
SHANK3-203ENST00000445220 SPRR5A0A1B0GTR4 108 aa6.83□□□□□ -1.32
SHANK3-203ENST00000445220 HERC1Q15751 4861 aa6.82□□□□□ -1.32
SHANK3-203ENST00000445220 MYCBP2O75592 4640 aa6.78□□□□□ -1.32
SHANK3-203ENST00000445220 KRTAP19-1Q8IUB9 90 aa6.78□□□□□ -1.32
SHANK3-203ENST00000445220 KRTAP9-6A0A140TA67 174 aa6.78□□□□□ -1.32
SHANK3-203ENST00000445220 FAT3Q8TDW7 4589 aa6.78□□□□□ -1.32
SHANK3-203ENST00000445220 KMT2CQ8NEZ4 4911 aaKnown RBP6.77□□□□□ -1.32
SHANK3-203ENST00000445220 LRP1Q07954 4544 aaKnown RBP6.74□□□□□ -1.33
SHANK3-203ENST00000445220 KRTAP10-7P60409 375 aaPredicted RBP6.74□□□□□ -1.33
SHANK3-203ENST00000445220 SPRR2EP22531 72 aa6.71□□□□□ -1.34
SHANK3-203ENST00000445220 SPRR2BP35325 72 aa6.71□□□□□ -1.34
SHANK3-203ENST00000445220 SPRR2AP35326 72 aa6.71□□□□□ -1.34
SHANK3-203ENST00000445220 HSPG2P98160 4391 aa6.69□□□□□ -1.34
SHANK3-203ENST00000445220 EPPK1P58107 5090 aaKnown RBP6.68□□□□□ -1.34
SHANK3-203ENST00000445220 ABCA13Q86UQ4 5058 aa6.64□□□□□ -1.35
SHANK3-203ENST00000445220 KRTAP12-4P60329 112 aa6.64□□□□□ -1.35
SHANK3-203ENST00000445220 PKHD1L1Q86WI1 4243 aa6.61□□□□□ -1.35
SHANK3-203ENST00000445220 MT1XP80297 61 aa6.58□□□□□ -1.36
SHANK3-203ENST00000445220 LRP2P98164 4655 aa6.55□□□□□ -1.36
SHANK3-203ENST00000445220 PKHD1P08F94 4074 aa6.55□□□□□ -1.36
SHANK3-203ENST00000445220 MT1BP07438 61 aa6.54□□□□□ -1.36
SHANK3-203ENST00000445220 SPRR2DP22532 72 aa6.51□□□□□ -1.37
SHANK3-203ENST00000445220 KRTAP9-8Q9BYQ0 159 aa6.51□□□□□ -1.37
SHANK3-203ENST00000445220 PKD1P98161 4303 aa6.51□□□□□ -1.37
SHANK3-203ENST00000445220 UBR4Q5T4S7 5183 aa6.48□□□□□ -1.37
SHANK3-203ENST00000445220 LCE2CQ5TA81 110 aa6.48□□□□□ -1.37
SHANK3-203ENST00000445220 LCE3BQ5TA77 95 aa6.46□□□□□ -1.37
SHANK3-203ENST00000445220 LCE2DQ5TA82 110 aaPredicted RBP6.45□□□□□ -1.38
SHANK3-203ENST00000445220 KRTAP9-3Q9BYQ3 159 aa6.37□□□□□ -1.39
SHANK3-203ENST00000445220 LCE2BO14633 110 aa6.35□□□□□ -1.39
SHANK3-203ENST00000445220 MT1GP13640 62 aa6.33□□□□□ -1.4
SHANK3-203ENST00000445220 LCE2AQ5TA79 106 aaPredicted RBP6.31□□□□□ -1.4
SHANK3-203ENST00000445220 FSIP2Q5CZC0 6907 aa6.27□□□□□ -1.41
SHANK3-203ENST00000445220 LCE3DQ9BYE3 92 aa6.27□□□□□ -1.41
SHANK3-203ENST00000445220 KRTAP9-7A8MTY7 169 aa6.26□□□□□ -1.41
SHANK3-203ENST00000445220 RNF213Q63HN8 5207 aa6.26□□□□□ -1.41
SHANK3-203ENST00000445220 TNXBP22105 4242 aa6.24□□□□□ -1.41
SHANK3-203ENST00000445220 LCE3EQ5T5B0 92 aa6.22□□□□□ -1.41
SHANK3-203ENST00000445220 LPAP08519 4548 aa6.21□□□□□ -1.42
SHANK3-203ENST00000445220 KRTAP4-8A0A0G2JLE6 195 aa6.2□□□□□ -1.42
SHANK3-203ENST00000445220 KRTAP4-8Q9BYQ9 185 aa6.2□□□□□ -1.42
SHANK3-203ENST00000445220 KRTAP19-2Q3LHN2 52 aa6.16□□□□□ -1.42
SHANK3-203ENST00000445220 KRTAP19-6Q3LI70 58 aa6.1□□□□□ -1.43
SHANK3-203ENST00000445220 FAT4Q6V0I7 4981 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms