RNA–Protein interactions for RNA: ENST00000444191.5

HCFC1-203, Transcript of host cell factor C1, humanhuman

TSL 5

Gene HCFC1, Length 3,624 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-203ENST00000444191 SACSQ9NZJ4 4579 aa6.03□□□□□ -1.44
HCFC1-203ENST00000444191 MYCBP2O75592 4640 aa6.03□□□□□ -1.44
HCFC1-203ENST00000444191 KRTAP10-8P60410 259 aa5.99□□□□□ -1.45
HCFC1-203ENST00000444191 KRTAP13-4Q3LI77 160 aa5.97□□□□□ -1.45
HCFC1-203ENST00000444191 XP32Q5T750 250 aa5.97□□□□□ -1.45
HCFC1-203ENST00000444191 M0QZ58 72 aa5.93□□□□□ -1.46
HCFC1-203ENST00000444191 TPRXLQ17RH7 258 aa5.92□□□□□ -1.46
HCFC1-203ENST00000444191 R4GN34 69 aa5.92□□□□□ -1.46
HCFC1-203ENST00000444191 KMT2CQ8NEZ4 4911 aaKnown RBP5.91□□□□□ -1.46
HCFC1-203ENST00000444191 DYNC1H1Q14204 4646 aaKnown RBP5.91□□□□□ -1.46
HCFC1-203ENST00000444191 KRTAP10-6P60371 365 aaPredicted RBP5.89□□□□□ -1.47
HCFC1-203ENST00000444191 A0A1B0GVY2 172 aa5.88□□□□□ -1.47
HCFC1-203ENST00000444191 LRP1Q07954 4544 aaKnown RBP5.88□□□□□ -1.47
HCFC1-203ENST00000444191 KRTAP12-2P59991 146 aa5.86□□□□□ -1.47
HCFC1-203ENST00000444191 A0A0A0MQY5 61 aa5.84□□□□□ -1.47
HCFC1-203ENST00000444191 KRTAP3-3Q9BYR6 98 aa5.84□□□□□ -1.48
HCFC1-203ENST00000444191 RYR2Q92736 4967 aa5.83□□□□□ -1.48
HCFC1-203ENST00000444191 KRTAP10-4P60372 401 aaPredicted RBP5.83□□□□□ -1.48
HCFC1-203ENST00000444191 FAT3Q8TDW7 4589 aa5.83□□□□□ -1.48
HCFC1-203ENST00000444191 J3QL48 77 aa5.82□□□□□ -1.48
HCFC1-203ENST00000444191 APOBP04114 4563 aaKnown RBP5.8□□□□□ -1.48
HCFC1-203ENST00000444191 CAMK2N1Q7Z7J9 78 aa5.8□□□□□ -1.48
HCFC1-203ENST00000444191 KRTAP3-2Q9BYR7 98 aa5.78□□□□□ -1.48
HCFC1-203ENST00000444191 RYR3Q15413 4870 aa5.78□□□□□ -1.48
HCFC1-203ENST00000444191 KRTAP15-1Q3LI76 137 aa5.75□□□□□ -1.49
HCFC1-203ENST00000444191 KRTAP12-1P59990 96 aa5.73□□□□□ -1.49
HCFC1-203ENST00000444191 PKHD1L1Q86WI1 4243 aa5.71□□□□□ -1.5
HCFC1-203ENST00000444191 KRTAP21-3Q3LHN1 58 aa5.69□□□□□ -1.5
HCFC1-203ENST00000444191 KIAA1109Q2LD37 5005 aa5.68□□□□□ -1.5
HCFC1-203ENST00000444191 SEC61BP60468 96 aaKnown RBP5.64□□□□□ -1.51
HCFC1-203ENST00000444191 LUZP6Q538Z0 58 aa5.63□□□□□ -1.51
HCFC1-203ENST00000444191 RYR1P21817 5038 aa5.63□□□□□ -1.51
HCFC1-203ENST00000444191 HSPG2P98160 4391 aa5.62□□□□□ -1.51
HCFC1-203ENST00000444191 LRP2P98164 4655 aa5.61□□□□□ -1.51
HCFC1-203ENST00000444191 MT1HL1P0DM35 61 aa5.59□□□□□ -1.51
HCFC1-203ENST00000444191 TNXBP22105 4242 aa5.57□□□□□ -1.52
HCFC1-203ENST00000444191 EPPK1P58107 5090 aaKnown RBP5.54□□□□□ -1.52
HCFC1-203ENST00000444191 KRTAP17-1Q9BYP8 105 aa5.53□□□□□ -1.52
HCFC1-203ENST00000444191 PLAC4Q8WY50 150 aa5.53□□□□□ -1.52
HCFC1-203ENST00000444191 KRTAP4-5Q9BYR2 181 aa5.52□□□□□ -1.53
HCFC1-203ENST00000444191 M0R2T5 61 aa5.5□□□□□ -1.53
HCFC1-203ENST00000444191 LORP23490 312 aaPredicted RBP5.5□□□□□ -1.53
HCFC1-203ENST00000444191 LPAP08519 4548 aa5.46□□□□□ -1.53
HCFC1-203ENST00000444191 ABCA13Q86UQ4 5058 aa5.35□□□□□ -1.55
HCFC1-203ENST00000444191 TNP1P09430 55 aa5.33□□□□□ -1.56
HCFC1-203ENST00000444191 KRTAP4-1Q9BYQ7 146 aa5.31□□□□□ -1.56
HCFC1-203ENST00000444191 LCE2DQ5TA82 110 aaPredicted RBP5.3□□□□□ -1.56
HCFC1-203ENST00000444191 MUC2Q02817 5179 aa5.27□□□□□ -1.57
HCFC1-203ENST00000444191 PP632Q6XCG6 107 aa5.23□□□□□ -1.57
HCFC1-203ENST00000444191 KRTAP10-10P60014 251 aa5.12□□□□□ -1.59
HCFC1-203ENST00000444191 HERC2O95714 4834 aa5.12□□□□□ -1.59
HCFC1-203ENST00000444191 MUC17Q685J3 4493 aa5.03□□□□□ -1.6
HCFC1-203ENST00000444191 PCLOQ9Y6V0 5065 aa5□□□□□ -1.61
HCFC1-203ENST00000444191 FAT4Q6V0I7 4981 aa5□□□□□ -1.61
HCFC1-203ENST00000444191 BIRC6Q9NR09 4857 aa4.99□□□□□ -1.61
HCFC1-203ENST00000444191 HERC1Q15751 4861 aa4.98□□□□□ -1.61
HCFC1-203ENST00000444191 RNF213Q63HN8 5207 aa4.97□□□□□ -1.61
HCFC1-203ENST00000444191 LCE3AQ5TA76 89 aa4.9□□□□□ -1.62
HCFC1-203ENST00000444191 HMCN2Q8NDA2 5059 aa4.84□□□□□ -1.64
HCFC1-203ENST00000444191 UBR4Q5T4S7 5183 aa4.82□□□□□ -1.64
HCFC1-203ENST00000444191 KRTAP19-2Q3LHN2 52 aa4.82□□□□□ -1.64
HCFC1-203ENST00000444191 FLGP20930 4061 aaPredicted RBP4.77□□□□□ -1.65
HCFC1-203ENST00000444191 PRO2289Q9P1D8 64 aa4.76□□□□□ -1.65
HCFC1-203ENST00000444191 KRTAP19-1Q8IUB9 90 aa4.74□□□□□ -1.65
HCFC1-203ENST00000444191 LCE2BO14633 110 aa4.72□□□□□ -1.65
HCFC1-203ENST00000444191 MT1FP04733 61 aa4.72□□□□□ -1.65
HCFC1-203ENST00000444191 MT1HP80294 61 aa4.71□□□□□ -1.66
HCFC1-203ENST00000444191 SPRR5A0A1B0GTR4 108 aa4.7□□□□□ -1.66
HCFC1-203ENST00000444191 SPRR2GQ9BYE4 73 aa4.7□□□□□ -1.66
HCFC1-203ENST00000444191 MT2AP02795 61 aa4.69□□□□□ -1.66
HCFC1-203ENST00000444191 KRTAP10-12P60413 245 aa4.69□□□□□ -1.66
HCFC1-203ENST00000444191 KRTAP12-3P60328 96 aa4.68□□□□□ -1.66
HCFC1-203ENST00000444191 FSIP2Q5CZC0 6907 aa4.68□□□□□ -1.66
HCFC1-203ENST00000444191 LCE2CQ5TA81 110 aa4.65□□□□□ -1.66
HCFC1-203ENST00000444191 KRTAP23-1A1A580 65 aa4.65□□□□□ -1.67
HCFC1-203ENST00000444191 INE1O15225 51 aa4.58□□□□□ -1.68
HCFC1-203ENST00000444191 KRTAP10-7P60409 375 aaPredicted RBP4.53□□□□□ -1.68
HCFC1-203ENST00000444191 KRTAP9-8Q9BYQ0 159 aa4.51□□□□□ -1.69
HCFC1-203ENST00000444191 KRTAP8-1Q8IUC2 63 aa4.5□□□□□ -1.69
HCFC1-203ENST00000444191 USH2AO75445 5202 aa4.5□□□□□ -1.69
HCFC1-203ENST00000444191 MT1XP80297 61 aa4.49□□□□□ -1.69
HCFC1-203ENST00000444191 KRTAP10-5P60370 271 aa4.48□□□□□ -1.69
HCFC1-203ENST00000444191 MT1BP07438 61 aa4.47□□□□□ -1.69
HCFC1-203ENST00000444191 KMT2DO14686 5537 aa4.46□□□□□ -1.7
HCFC1-203ENST00000444191 KRTAP19-5Q3LI72 72 aa4.41□□□□□ -1.7
HCFC1-203ENST00000444191 KRTAP19-8Q3LI54 63 aa4.39□□□□□ -1.71
HCFC1-203ENST00000444191 KRTAP4-8A0A0G2JLE6 195 aa4.36□□□□□ -1.71
HCFC1-203ENST00000444191 KRTAP4-8Q9BYQ9 185 aa4.36□□□□□ -1.71
HCFC1-203ENST00000444191 CRCT1Q9UGL9 99 aa4.34□□□□□ -1.71
HCFC1-203ENST00000444191 LCE2AQ5TA79 106 aaPredicted RBP4.33□□□□□ -1.72
HCFC1-203ENST00000444191 KRTAP9-3Q9BYQ3 159 aa4.29□□□□□ -1.72
HCFC1-203ENST00000444191 LCE3CQ5T5A8 94 aa4.27□□□□□ -1.73
HCFC1-203ENST00000444191 KRTAP4-7Q9BYR0 210 aa4.26□□□□□ -1.73
HCFC1-203ENST00000444191 OBSCNQ5VST9 7968 aa4.21□□□□□ -1.74
HCFC1-203ENST00000444191 DSTQ03001 7570 aaKnown RBP4.17□□□□□ -1.74
HCFC1-203ENST00000444191 SYNE1Q8NF91 8797 aaKnown RBP4.15□□□□□ -1.75
HCFC1-203ENST00000444191 FCGBPQ9Y6R7 5405 aaPredicted RBP4.1□□□□□ -1.75
HCFC1-203ENST00000444191 KRTAP9-6A8MVA2 160 aa4.05□□□□□ -1.76
HCFC1-203ENST00000444191 LOC100996750A0A140TA64 210 aa3.96□□□□□ -1.78
HCFC1-203ENST00000444191 MT1GP13640 62 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms