RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 P0C880 135 aa5.27□□□□□ -1.57
CDC42SE1-202ENST00000439374 RYR3Q15413 4870 aa5.24□□□□□ -1.57
CDC42SE1-202ENST00000439374 RYR2Q92736 4967 aa5.23□□□□□ -1.57
CDC42SE1-202ENST00000439374 A0A1B0GVY2 172 aa5.23□□□□□ -1.57
CDC42SE1-202ENST00000439374 APOBP04114 4563 aaKnown RBP5.22□□□□□ -1.57
CDC42SE1-202ENST00000439374 KIAA1109Q2LD37 5005 aa5.21□□□□□ -1.58
CDC42SE1-202ENST00000439374 RPL37P61927 97 aaKnown RBP5.21□□□□□ -1.58
CDC42SE1-202ENST00000439374 FAT3Q8TDW7 4589 aa5.21□□□□□ -1.58
CDC42SE1-202ENST00000439374 C20orf166-AS1Q96NR2 134 aa5.2□□□□□ -1.58
CDC42SE1-202ENST00000439374 KRTAP13-4Q3LI77 160 aa5.2□□□□□ -1.58
CDC42SE1-202ENST00000439374 TPRXLQ17RH7 258 aa5.19□□□□□ -1.58
CDC42SE1-202ENST00000439374 RPS29P62273 56 aaKnown RBP5.16□□□□□ -1.58
CDC42SE1-202ENST00000439374 KRTAP10-4P60372 401 aaPredicted RBP5.16□□□□□ -1.58
CDC42SE1-202ENST00000439374 EPPK1P58107 5090 aaKnown RBP5.12□□□□□ -1.59
CDC42SE1-202ENST00000439374 KRTAP10-8P60410 259 aa5.11□□□□□ -1.59
CDC42SE1-202ENST00000439374 RYR1P21817 5038 aa5.11□□□□□ -1.59
CDC42SE1-202ENST00000439374 S4R3F8 94 aa5.1□□□□□ -1.59
CDC42SE1-202ENST00000439374 XP32Q5T750 250 aa5.1□□□□□ -1.59
CDC42SE1-202ENST00000439374 KRTAP12-2P59991 146 aa5.07□□□□□ -1.6
CDC42SE1-202ENST00000439374 KRTAP10-6P60371 365 aaPredicted RBP5.04□□□□□ -1.6
CDC42SE1-202ENST00000439374 A0A0A0MQY5 61 aa5.04□□□□□ -1.6
CDC42SE1-202ENST00000439374 KRTAP17-1Q9BYP8 105 aa5.04□□□□□ -1.6
CDC42SE1-202ENST00000439374 HSPG2P98160 4391 aa5.03□□□□□ -1.6
CDC42SE1-202ENST00000439374 J3QL48 77 aa5.03□□□□□ -1.6
CDC42SE1-202ENST00000439374 LRP2P98164 4655 aa4.99□□□□□ -1.61
CDC42SE1-202ENST00000439374 PKHD1L1Q86WI1 4243 aa4.98□□□□□ -1.61
CDC42SE1-202ENST00000439374 KRTAP3-3Q9BYR6 98 aa4.98□□□□□ -1.61
CDC42SE1-202ENST00000439374 M0QZ58 72 aa4.97□□□□□ -1.61
CDC42SE1-202ENST00000439374 KRTAP4-5Q9BYR2 181 aa4.97□□□□□ -1.61
CDC42SE1-202ENST00000439374 KRTAP3-2Q9BYR7 98 aa4.95□□□□□ -1.62
CDC42SE1-202ENST00000439374 MT1HL1P0DM35 61 aa4.93□□□□□ -1.62
CDC42SE1-202ENST00000439374 LPAP08519 4548 aa4.92□□□□□ -1.62
CDC42SE1-202ENST00000439374 R4GN34 69 aa4.91□□□□□ -1.62
CDC42SE1-202ENST00000439374 KRTAP12-1P59990 96 aa4.91□□□□□ -1.62
CDC42SE1-202ENST00000439374 ABCA13Q86UQ4 5058 aa4.89□□□□□ -1.63
CDC42SE1-202ENST00000439374 KRTAP15-1Q3LI76 137 aa4.88□□□□□ -1.63
CDC42SE1-202ENST00000439374 TNXBP22105 4242 aa4.85□□□□□ -1.63
CDC42SE1-202ENST00000439374 CAMK2N1Q7Z7J9 78 aa4.82□□□□□ -1.64
CDC42SE1-202ENST00000439374 HERC2O95714 4834 aa4.81□□□□□ -1.64
CDC42SE1-202ENST00000439374 SEC61BP60468 96 aaKnown RBP4.79□□□□□ -1.64
CDC42SE1-202ENST00000439374 LUZP6Q538Z0 58 aa4.79□□□□□ -1.64
CDC42SE1-202ENST00000439374 PLAC4Q8WY50 150 aa4.77□□□□□ -1.65
CDC42SE1-202ENST00000439374 MUC2Q02817 5179 aa4.77□□□□□ -1.65
CDC42SE1-202ENST00000439374 LORP23490 312 aaPredicted RBP4.74□□□□□ -1.65
CDC42SE1-202ENST00000439374 HERC1Q15751 4861 aa4.72□□□□□ -1.65
CDC42SE1-202ENST00000439374 PCLOQ9Y6V0 5065 aa4.69□□□□□ -1.66
CDC42SE1-202ENST00000439374 KRTAP4-1Q9BYQ7 146 aa4.67□□□□□ -1.66
CDC42SE1-202ENST00000439374 M0R2T5 61 aa4.66□□□□□ -1.66
CDC42SE1-202ENST00000439374 BIRC6Q9NR09 4857 aa4.62□□□□□ -1.67
CDC42SE1-202ENST00000439374 RNF213Q63HN8 5207 aa4.6□□□□□ -1.67
CDC42SE1-202ENST00000439374 FAT4Q6V0I7 4981 aa4.55□□□□□ -1.68
CDC42SE1-202ENST00000439374 UBR4Q5T4S7 5183 aa4.52□□□□□ -1.69
CDC42SE1-202ENST00000439374 TNP1P09430 55 aa4.4□□□□□ -1.7
CDC42SE1-202ENST00000439374 MUC17Q685J3 4493 aa4.4□□□□□ -1.71
CDC42SE1-202ENST00000439374 HMCN2Q8NDA2 5059 aa4.37□□□□□ -1.71
CDC42SE1-202ENST00000439374 KRTAP10-10P60014 251 aa4.37□□□□□ -1.71
CDC42SE1-202ENST00000439374 PP632Q6XCG6 107 aa4.31□□□□□ -1.72
CDC42SE1-202ENST00000439374 KRTAP19-2Q3LHN2 52 aa4.28□□□□□ -1.72
CDC42SE1-202ENST00000439374 FLGP20930 4061 aaPredicted RBP4.24□□□□□ -1.73
CDC42SE1-202ENST00000439374 LCE3AQ5TA76 89 aa4.18□□□□□ -1.74
CDC42SE1-202ENST00000439374 MT1HP80294 61 aa4.16□□□□□ -1.74
CDC42SE1-202ENST00000439374 LCE2CQ5TA81 110 aa4.16□□□□□ -1.74
CDC42SE1-202ENST00000439374 MT1FP04733 61 aa4.13□□□□□ -1.75
CDC42SE1-202ENST00000439374 FSIP2Q5CZC0 6907 aa4.13□□□□□ -1.75
CDC42SE1-202ENST00000439374 KRTAP19-1Q8IUB9 90 aa4.11□□□□□ -1.75
CDC42SE1-202ENST00000439374 MT2AP02795 61 aa4.1□□□□□ -1.75
CDC42SE1-202ENST00000439374 USH2AO75445 5202 aa4.07□□□□□ -1.76
CDC42SE1-202ENST00000439374 SPRR2GQ9BYE4 73 aa4.04□□□□□ -1.76
CDC42SE1-202ENST00000439374 KMT2DO14686 5537 aa4.01□□□□□ -1.77
CDC42SE1-202ENST00000439374 KRTAP9-8Q9BYQ0 159 aa3.99□□□□□ -1.77
CDC42SE1-202ENST00000439374 KRTAP10-12P60413 245 aa3.92□□□□□ -1.78
CDC42SE1-202ENST00000439374 PRO2289Q9P1D8 64 aa3.92□□□□□ -1.78
CDC42SE1-202ENST00000439374 SPRR5A0A1B0GTR4 108 aa3.92□□□□□ -1.78
CDC42SE1-202ENST00000439374 KRTAP12-3P60328 96 aa3.92□□□□□ -1.78
CDC42SE1-202ENST00000439374 MT1BP07438 61 aa3.9□□□□□ -1.79
CDC42SE1-202ENST00000439374 OBSCNQ5VST9 7968 aa3.89□□□□□ -1.79
CDC42SE1-202ENST00000439374 KRTAP10-7P60409 375 aaPredicted RBP3.89□□□□□ -1.79
CDC42SE1-202ENST00000439374 MT1XP80297 61 aa3.87□□□□□ -1.79
CDC42SE1-202ENST00000439374 LCE2DQ5TA82 110 aaPredicted RBP3.87□□□□□ -1.79
CDC42SE1-202ENST00000439374 KRTAP10-5P60370 271 aa3.87□□□□□ -1.79
CDC42SE1-202ENST00000439374 KRTAP23-1A1A580 65 aa3.81□□□□□ -1.8
CDC42SE1-202ENST00000439374 KRTAP19-8Q3LI54 63 aa3.81□□□□□ -1.8
CDC42SE1-202ENST00000439374 KRTAP9-3Q9BYQ3 159 aa3.8□□□□□ -1.8
CDC42SE1-202ENST00000439374 KRTAP4-8A0A0G2JLE6 195 aa3.78□□□□□ -1.8
CDC42SE1-202ENST00000439374 KRTAP4-8Q9BYQ9 185 aa3.78□□□□□ -1.8
CDC42SE1-202ENST00000439374 LCE2BO14633 110 aa3.76□□□□□ -1.81
CDC42SE1-202ENST00000439374 KRTAP8-1Q8IUC2 63 aa3.76□□□□□ -1.81
CDC42SE1-202ENST00000439374 SYNE1Q8NF91 8797 aaKnown RBP3.76□□□□□ -1.81
CDC42SE1-202ENST00000439374 INE1O15225 51 aa3.75□□□□□ -1.81
CDC42SE1-202ENST00000439374 DSTQ03001 7570 aaKnown RBP3.75□□□□□ -1.81
CDC42SE1-202ENST00000439374 KRTAP19-5Q3LI72 72 aa3.74□□□□□ -1.81
CDC42SE1-202ENST00000439374 KRTAP4-7Q9BYR0 210 aa3.74□□□□□ -1.81
CDC42SE1-202ENST00000439374 CRCT1Q9UGL9 99 aa3.72□□□□□ -1.81
CDC42SE1-202ENST00000439374 FCGBPQ9Y6R7 5405 aaPredicted RBP3.67□□□□□ -1.82
CDC42SE1-202ENST00000439374 LCE2AQ5TA79 106 aaPredicted RBP3.65□□□□□ -1.83
CDC42SE1-202ENST00000439374 LCE3CQ5T5A8 94 aa3.59□□□□□ -1.83
CDC42SE1-202ENST00000439374 SSPOA2VEC9 5147 aa3.58□□□□□ -1.84
CDC42SE1-202ENST00000439374 KRTAP9-6A8MVA2 160 aa3.57□□□□□ -1.84
CDC42SE1-202ENST00000439374 MUC12Q9UKN1 5478 aa3.53□□□□□ -1.84
CDC42SE1-202ENST00000439374 LOC100996750A0A140TA64 210 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms