RNA–Protein interactions for RNA: ENST00000438661.2

KCNC4-204, Transcript of potassium voltage-gated channel subfamily C member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KCNC4, Length 2,953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC4-204ENST00000438661 RPS29P62273 56 aaKnown RBP9.41□□□□□ -0.9
KCNC4-204ENST00000438661 DYNC1H1Q14204 4646 aaKnown RBP9.41□□□□□ -0.9
KCNC4-204ENST00000438661 KRTAP15-1Q3LI76 137 aa9.34□□□□□ -0.91
KCNC4-204ENST00000438661 KRTAP3-3Q9BYR6 98 aa9.3□□□□□ -0.92
KCNC4-204ENST00000438661 PKHD1L1Q86WI1 4243 aa9.28□□□□□ -0.92
KCNC4-204ENST00000438661 APOBP04114 4563 aaKnown RBP9.28□□□□□ -0.92
KCNC4-204ENST00000438661 KRTAP3-2Q9BYR7 98 aa9.27□□□□□ -0.92
KCNC4-204ENST00000438661 S4R3F8 94 aa9.27□□□□□ -0.93
KCNC4-204ENST00000438661 KRTAP12-2P59991 146 aa9.26□□□□□ -0.93
KCNC4-204ENST00000438661 KRTAP10-4P60372 401 aaPredicted RBP9.24□□□□□ -0.93
KCNC4-204ENST00000438661 A0A1B0GVY2 172 aa9.15□□□□□ -0.94
KCNC4-204ENST00000438661 KRTAP10-8P60410 259 aa9.14□□□□□ -0.95
KCNC4-204ENST00000438661 LRP1Q07954 4544 aaKnown RBP9.1□□□□□ -0.95
KCNC4-204ENST00000438661 FAT3Q8TDW7 4589 aa9.08□□□□□ -0.96
KCNC4-204ENST00000438661 MYCBP2O75592 4640 aa9.07□□□□□ -0.96
KCNC4-204ENST00000438661 KRTAP12-1P59990 96 aa9.07□□□□□ -0.96
KCNC4-204ENST00000438661 HSPG2P98160 4391 aa9.04□□□□□ -0.96
KCNC4-204ENST00000438661 RYR2Q92736 4967 aa8.98□□□□□ -0.97
KCNC4-204ENST00000438661 TNXBP22105 4242 aa8.98□□□□□ -0.97
KCNC4-204ENST00000438661 XP32Q5T750 250 aa8.97□□□□□ -0.97
KCNC4-204ENST00000438661 KMT2CQ8NEZ4 4911 aaKnown RBP8.95□□□□□ -0.98
KCNC4-204ENST00000438661 A0A0A0MQY5 61 aa8.91□□□□□ -0.98
KCNC4-204ENST00000438661 Q5VSD8 79 aa8.82□□□□□ -1
KCNC4-204ENST00000438661 KRTAP21-3Q3LHN1 58 aa8.79□□□□□ -1
KCNC4-204ENST00000438661 LPAP08519 4548 aa8.78□□□□□ -1
KCNC4-204ENST00000438661 LUZP6Q538Z0 58 aa8.77□□□□□ -1.01
KCNC4-204ENST00000438661 M0QZ58 72 aa8.77□□□□□ -1.01
KCNC4-204ENST00000438661 PLAC4Q8WY50 150 aa8.77□□□□□ -1.01
KCNC4-204ENST00000438661 KRTAP17-1Q9BYP8 105 aa8.72□□□□□ -1.01
KCNC4-204ENST00000438661 RYR1P21817 5038 aa8.66□□□□□ -1.02
KCNC4-204ENST00000438661 R4GN34 69 aa8.65□□□□□ -1.02
KCNC4-204ENST00000438661 LRP2P98164 4655 aa8.62□□□□□ -1.03
KCNC4-204ENST00000438661 RYR3Q15413 4870 aa8.62□□□□□ -1.03
KCNC4-204ENST00000438661 KIAA1109Q2LD37 5005 aa8.61□□□□□ -1.03
KCNC4-204ENST00000438661 MT1HL1P0DM35 61 aa8.59□□□□□ -1.03
KCNC4-204ENST00000438661 LORP23490 312 aaPredicted RBP8.46□□□□□ -1.06
KCNC4-204ENST00000438661 ABCA13Q86UQ4 5058 aa8.42□□□□□ -1.06
KCNC4-204ENST00000438661 CAMK2N1Q7Z7J9 78 aa8.34□□□□□ -1.07
KCNC4-204ENST00000438661 EPPK1P58107 5090 aaKnown RBP8.32□□□□□ -1.08
KCNC4-204ENST00000438661 PP632Q6XCG6 107 aa8.22□□□□□ -1.09
KCNC4-204ENST00000438661 KRTAP4-5Q9BYR2 181 aa8.21□□□□□ -1.1
KCNC4-204ENST00000438661 MUC17Q685J3 4493 aa8.17□□□□□ -1.1
KCNC4-204ENST00000438661 KRTAP4-1Q9BYQ7 146 aa8.11□□□□□ -1.11
KCNC4-204ENST00000438661 SEC61BP60468 96 aaKnown RBP8.08□□□□□ -1.12
KCNC4-204ENST00000438661 MUC2Q02817 5179 aa7.97□□□□□ -1.13
KCNC4-204ENST00000438661 TNP1P09430 55 aa7.96□□□□□ -1.14
KCNC4-204ENST00000438661 KRTAP19-2Q3LHN2 52 aa7.92□□□□□ -1.14
KCNC4-204ENST00000438661 J3QL48 77 aa7.9□□□□□ -1.15
KCNC4-204ENST00000438661 HERC2O95714 4834 aa7.85□□□□□ -1.15
KCNC4-204ENST00000438661 SPRR5A0A1B0GTR4 108 aa7.81□□□□□ -1.16
KCNC4-204ENST00000438661 FLGP20930 4061 aaPredicted RBP7.71□□□□□ -1.17
KCNC4-204ENST00000438661 PCLOQ9Y6V0 5065 aa7.66□□□□□ -1.18
KCNC4-204ENST00000438661 BIRC6Q9NR09 4857 aa7.63□□□□□ -1.19
KCNC4-204ENST00000438661 KRTAP23-1A1A580 65 aa7.62□□□□□ -1.19
KCNC4-204ENST00000438661 PRO2289Q9P1D8 64 aa7.59□□□□□ -1.19
KCNC4-204ENST00000438661 HERC1Q15751 4861 aa7.55□□□□□ -1.2
KCNC4-204ENST00000438661 FAT4Q6V0I7 4981 aa7.54□□□□□ -1.2
KCNC4-204ENST00000438661 LCE3AQ5TA76 89 aa7.52□□□□□ -1.21
KCNC4-204ENST00000438661 HMCN2Q8NDA2 5059 aa7.42□□□□□ -1.22
KCNC4-204ENST00000438661 LCE2CQ5TA81 110 aa7.39□□□□□ -1.23
KCNC4-204ENST00000438661 INE1O15225 51 aa7.35□□□□□ -1.23
KCNC4-204ENST00000438661 KRTAP19-1Q8IUB9 90 aa7.32□□□□□ -1.24
KCNC4-204ENST00000438661 SPRR2GQ9BYE4 73 aa7.31□□□□□ -1.24
KCNC4-204ENST00000438661 RNF213Q63HN8 5207 aa7.3□□□□□ -1.24
KCNC4-204ENST00000438661 M0R2T5 61 aa7.3□□□□□ -1.24
KCNC4-204ENST00000438661 UBR4Q5T4S7 5183 aa7.19□□□□□ -1.26
KCNC4-204ENST00000438661 MT1HP80294 61 aa7.17□□□□□ -1.26
KCNC4-204ENST00000438661 KRTAP10-10P60014 251 aa7.15□□□□□ -1.26
KCNC4-204ENST00000438661 MT1FP04733 61 aa7.14□□□□□ -1.27
KCNC4-204ENST00000438661 KRTAP8-1Q8IUC2 63 aa7.14□□□□□ -1.27
KCNC4-204ENST00000438661 MT2AP02795 61 aa7.11□□□□□ -1.27
KCNC4-204ENST00000438661 KRTAP12-3P60328 96 aa7.09□□□□□ -1.27
KCNC4-204ENST00000438661 KRTAP9-8Q9BYQ0 159 aa7.04□□□□□ -1.28
KCNC4-204ENST00000438661 KRTAP10-12P60413 245 aa6.97□□□□□ -1.29
KCNC4-204ENST00000438661 KRTAP19-8Q3LI54 63 aa6.94□□□□□ -1.3
KCNC4-204ENST00000438661 KRTAP10-5P60370 271 aa6.93□□□□□ -1.3
KCNC4-204ENST00000438661 MT1BP07438 61 aa6.91□□□□□ -1.3
KCNC4-204ENST00000438661 MT1XP80297 61 aa6.9□□□□□ -1.3
KCNC4-204ENST00000438661 KRTAP10-7P60409 375 aaPredicted RBP6.86□□□□□ -1.31
KCNC4-204ENST00000438661 KMT2DO14686 5537 aa6.73□□□□□ -1.33
KCNC4-204ENST00000438661 KRTAP9-3Q9BYQ3 159 aa6.72□□□□□ -1.33
KCNC4-204ENST00000438661 LCE3CQ5T5A8 94 aa6.66□□□□□ -1.34
KCNC4-204ENST00000438661 KRTAP19-5Q3LI72 72 aa6.65□□□□□ -1.34
KCNC4-204ENST00000438661 USH2AO75445 5202 aa6.58□□□□□ -1.36
KCNC4-204ENST00000438661 KRTAP9-6A8MVA2 160 aa6.56□□□□□ -1.36
KCNC4-204ENST00000438661 LCE2BO14633 110 aa6.48□□□□□ -1.37
KCNC4-204ENST00000438661 KRTAP4-7Q9BYR0 210 aa6.44□□□□□ -1.38
KCNC4-204ENST00000438661 KRTAP4-8A0A0G2JLE6 195 aa6.42□□□□□ -1.38
KCNC4-204ENST00000438661 KRTAP4-8Q9BYQ9 185 aa6.42□□□□□ -1.38
KCNC4-204ENST00000438661 KRTAP2-3P0C7H8 128 aa6.34□□□□□ -1.39
KCNC4-204ENST00000438661 KRTAP2-4Q9BYR9 128 aa6.34□□□□□ -1.39
KCNC4-204ENST00000438661 KRTAP2-1Q9BYU5 128 aa6.34□□□□□ -1.39
KCNC4-204ENST00000438661 LCE2AQ5TA79 106 aaPredicted RBP6.16□□□□□ -1.42
KCNC4-204ENST00000438661 KRTAP19-7Q3SYF9 63 aa6.15□□□□□ -1.42
KCNC4-204ENST00000438661 MT1LQ93083 61 aa5.98□□□□□ -1.45
KCNC4-204ENST00000438661 LOC100996750A0A140TA64 210 aa5.97□□□□□ -1.45
KCNC4-204ENST00000438661 KRTAP12-4P60329 112 aa5.96□□□□□ -1.46
KCNC4-204ENST00000438661 MT1EP04732 61 aa5.95□□□□□ -1.46
KCNC4-204ENST00000438661 SSPOA2VEC9 5147 aa5.92□□□□□ -1.46
KCNC4-204ENST00000438661 CRCT1Q9UGL9 99 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms