RNA–Protein interactions for RNA: ENST00000438055.5

TTC3-209, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 3,606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-209ENST00000438055 KRTAP10-8P60410 259 aa8.69□□□□□ -1.02
TTC3-209ENST00000438055 CRIPTQ9P021 101 aa8.69□□□□□ -1.02
TTC3-209ENST00000438055 XP32Q5T750 250 aa8.67□□□□□ -1.02
TTC3-209ENST00000438055 RYR2Q92736 4967 aa8.67□□□□□ -1.02
TTC3-209ENST00000438055 S4R3F8 94 aa8.65□□□□□ -1.02
TTC3-209ENST00000438055 PKHD1L1Q86WI1 4243 aa8.58□□□□□ -1.04
TTC3-209ENST00000438055 FAT3Q8TDW7 4589 aa8.54□□□□□ -1.04
TTC3-209ENST00000438055 KIAA1109Q2LD37 5005 aa8.5□□□□□ -1.05
TTC3-209ENST00000438055 KRTAP3-3Q9BYR6 98 aa8.5□□□□□ -1.05
TTC3-209ENST00000438055 KRTAP25-1Q3LHN0 102 aa8.49□□□□□ -1.05
TTC3-209ENST00000438055 P0C880 135 aa8.47□□□□□ -1.05
TTC3-209ENST00000438055 KRTAP10-6P60371 365 aaPredicted RBP8.47□□□□□ -1.05
TTC3-209ENST00000438055 HSPG2P98160 4391 aa8.47□□□□□ -1.05
TTC3-209ENST00000438055 KRTAP13-4Q3LI77 160 aa8.46□□□□□ -1.06
TTC3-209ENST00000438055 SPINT4Q6UDR6 99 aa8.44□□□□□ -1.06
TTC3-209ENST00000438055 KRTAP17-1Q9BYP8 105 aa8.43□□□□□ -1.06
TTC3-209ENST00000438055 RYR3Q15413 4870 aa8.43□□□□□ -1.06
TTC3-209ENST00000438055 ROMO1P60602 79 aa8.42□□□□□ -1.06
TTC3-209ENST00000438055 MT1HL1P0DM35 61 aa8.42□□□□□ -1.06
TTC3-209ENST00000438055 TNXBP22105 4242 aa8.4□□□□□ -1.06
TTC3-209ENST00000438055 RYR1P21817 5038 aa8.4□□□□□ -1.07
TTC3-209ENST00000438055 KRTAP3-2Q9BYR7 98 aa8.38□□□□□ -1.07
TTC3-209ENST00000438055 LRP2P98164 4655 aa8.28□□□□□ -1.08
TTC3-209ENST00000438055 TPRXLQ17RH7 258 aa8.27□□□□□ -1.09
TTC3-209ENST00000438055 C10orf95Q9H7T3 257 aa8.24□□□□□ -1.09
TTC3-209ENST00000438055 KRTAP12-2P59991 146 aa8.22□□□□□ -1.09
TTC3-209ENST00000438055 J3QL48 77 aa8.22□□□□□ -1.09
TTC3-209ENST00000438055 M0QZ58 72 aa8.18□□□□□ -1.1
TTC3-209ENST00000438055 KRTAP4-5Q9BYR2 181 aa8.18□□□□□ -1.1
TTC3-209ENST00000438055 LPAP08519 4548 aa8.18□□□□□ -1.1
TTC3-209ENST00000438055 R4GN34 69 aa8.15□□□□□ -1.1
TTC3-209ENST00000438055 SEC61BP60468 96 aaKnown RBP8.13□□□□□ -1.11
TTC3-209ENST00000438055 KRTAP12-1P59990 96 aa8.12□□□□□ -1.11
TTC3-209ENST00000438055 EPPK1P58107 5090 aaKnown RBP8.11□□□□□ -1.11
TTC3-209ENST00000438055 H3BS24 57 aa8.07□□□□□ -1.12
TTC3-209ENST00000438055 ABCA13Q86UQ4 5058 aa8.03□□□□□ -1.12
TTC3-209ENST00000438055 KRTAP4-1Q9BYQ7 146 aa7.87□□□□□ -1.15
TTC3-209ENST00000438055 LORP23490 312 aaPredicted RBP7.86□□□□□ -1.15
TTC3-209ENST00000438055 CAMK2N1Q7Z7J9 78 aa7.84□□□□□ -1.15
TTC3-209ENST00000438055 HERC2O95714 4834 aa7.8□□□□□ -1.16
TTC3-209ENST00000438055 NDUFAF8A1L188 74 aa7.73□□□□□ -1.17
TTC3-209ENST00000438055 MUC2Q02817 5179 aa7.68□□□□□ -1.18
TTC3-209ENST00000438055 KRTAP15-1Q3LI76 137 aa7.62□□□□□ -1.19
TTC3-209ENST00000438055 MUC17Q685J3 4493 aa7.6□□□□□ -1.19
TTC3-209ENST00000438055 M0R2T5 61 aa7.54□□□□□ -1.2
TTC3-209ENST00000438055 PLAC4Q8WY50 150 aa7.5□□□□□ -1.21
TTC3-209ENST00000438055 KRTAP19-2Q3LHN2 52 aa7.49□□□□□ -1.21
TTC3-209ENST00000438055 HERC1Q15751 4861 aa7.42□□□□□ -1.22
TTC3-209ENST00000438055 BIRC6Q9NR09 4857 aa7.42□□□□□ -1.22
TTC3-209ENST00000438055 TNP1P09430 55 aa7.38□□□□□ -1.23
TTC3-209ENST00000438055 PP632Q6XCG6 107 aa7.38□□□□□ -1.23
TTC3-209ENST00000438055 FAT4Q6V0I7 4981 aa7.34□□□□□ -1.23
TTC3-209ENST00000438055 FLGP20930 4061 aaPredicted RBP7.33□□□□□ -1.24
TTC3-209ENST00000438055 LUZP6Q538Z0 58 aa7.33□□□□□ -1.24
TTC3-209ENST00000438055 PCLOQ9Y6V0 5065 aa7.25□□□□□ -1.25
TTC3-209ENST00000438055 KRTAP10-10P60014 251 aa7.21□□□□□ -1.26
TTC3-209ENST00000438055 HMCN2Q8NDA2 5059 aa7.2□□□□□ -1.26
TTC3-209ENST00000438055 RNF213Q63HN8 5207 aa7.2□□□□□ -1.26
TTC3-209ENST00000438055 LCE2CQ5TA81 110 aa7.14□□□□□ -1.27
TTC3-209ENST00000438055 UBR4Q5T4S7 5183 aa7.09□□□□□ -1.27
TTC3-209ENST00000438055 MT1HP80294 61 aa7.06□□□□□ -1.28
TTC3-209ENST00000438055 KRTAP19-1Q8IUB9 90 aa7.05□□□□□ -1.28
TTC3-209ENST00000438055 SPRR2GQ9BYE4 73 aa7.04□□□□□ -1.28
TTC3-209ENST00000438055 MT1FP04733 61 aa6.99□□□□□ -1.29
TTC3-209ENST00000438055 MT2AP02795 61 aa6.97□□□□□ -1.29
TTC3-209ENST00000438055 LCE3AQ5TA76 89 aa6.92□□□□□ -1.3
TTC3-209ENST00000438055 KRTAP23-1A1A580 65 aa6.91□□□□□ -1.3
TTC3-209ENST00000438055 A0A0A0MQY5 61 aa6.9□□□□□ -1.31
TTC3-209ENST00000438055 KRTAP9-8Q9BYQ0 159 aa6.83□□□□□ -1.32
TTC3-209ENST00000438055 KRTAP19-8Q3LI54 63 aa6.69□□□□□ -1.34
TTC3-209ENST00000438055 MT1BP07438 61 aa6.68□□□□□ -1.34
TTC3-209ENST00000438055 KRTAP10-12P60413 245 aa6.67□□□□□ -1.34
TTC3-209ENST00000438055 SPRR5A0A1B0GTR4 108 aa6.64□□□□□ -1.35
TTC3-209ENST00000438055 MT1XP80297 61 aa6.64□□□□□ -1.35
TTC3-209ENST00000438055 KRTAP10-5P60370 271 aa6.64□□□□□ -1.35
TTC3-209ENST00000438055 KRTAP12-3P60328 96 aa6.6□□□□□ -1.35
TTC3-209ENST00000438055 KRTAP8-1Q8IUC2 63 aa6.59□□□□□ -1.35
TTC3-209ENST00000438055 PRO2289Q9P1D8 64 aa6.59□□□□□ -1.35
TTC3-209ENST00000438055 KRTAP10-7P60409 375 aaPredicted RBP6.55□□□□□ -1.36
TTC3-209ENST00000438055 KRTAP9-3Q9BYQ3 159 aa6.54□□□□□ -1.36
TTC3-209ENST00000438055 USH2AO75445 5202 aa6.44□□□□□ -1.38
TTC3-209ENST00000438055 LCE2BO14633 110 aa6.34□□□□□ -1.39
TTC3-209ENST00000438055 KRTAP19-5Q3LI72 72 aa6.3□□□□□ -1.4
TTC3-209ENST00000438055 KMT2DO14686 5537 aa6.3□□□□□ -1.4
TTC3-209ENST00000438055 KRTAP4-8A0A0G2JLE6 195 aa6.23□□□□□ -1.41
TTC3-209ENST00000438055 KRTAP4-8Q9BYQ9 185 aa6.23□□□□□ -1.41
TTC3-209ENST00000438055 LCE3CQ5T5A8 94 aa6.13□□□□□ -1.43
TTC3-209ENST00000438055 LCE2AQ5TA79 106 aaPredicted RBP6.09□□□□□ -1.43
TTC3-209ENST00000438055 FSIP2Q5CZC0 6907 aa6.08□□□□□ -1.44
TTC3-209ENST00000438055 INE1O15225 51 aa6.01□□□□□ -1.45
TTC3-209ENST00000438055 KRTAP4-7Q9BYR0 210 aa5.97□□□□□ -1.45
TTC3-209ENST00000438055 KRTAP19-7Q3SYF9 63 aa5.89□□□□□ -1.47
TTC3-209ENST00000438055 KRTAP9-6A8MVA2 160 aa5.86□□□□□ -1.47
TTC3-209ENST00000438055 SSPOA2VEC9 5147 aa5.79□□□□□ -1.48
TTC3-209ENST00000438055 MT1LQ93083 61 aa5.76□□□□□ -1.49
TTC3-209ENST00000438055 MT1EP04732 61 aa5.75□□□□□ -1.49
TTC3-209ENST00000438055 CRCT1Q9UGL9 99 aa5.69□□□□□ -1.5
TTC3-209ENST00000438055 MUC12Q9UKN1 5478 aa5.6□□□□□ -1.51
TTC3-209ENST00000438055 KRTAP19-6Q3LI70 58 aa5.59□□□□□ -1.51
TTC3-209ENST00000438055 KRTAP4-3Q9BYR4 195 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 298.8 ms