RNA–Protein interactions for RNA: ENST00000433274.6

SF1-209, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 2,317 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-209ENST00000433274 LPAP08519 4548 aa7.91□□□□□ -1.14
SF1-209ENST00000433274 KRTAP3-1Q9BYR8 98 aa7.89□□□□□ -1.15
SF1-209ENST00000433274 LRP2P98164 4655 aa7.88□□□□□ -1.15
SF1-209ENST00000433274 COX6B2Q6YFQ2 88 aa7.85□□□□□ -1.15
SF1-209ENST00000433274 PRR15LQ9BU68 103 aa7.85□□□□□ -1.15
SF1-209ENST00000433274 LINC01558Q9Y6Z2 57 aa7.84□□□□□ -1.15
SF1-209ENST00000433274 CDC42SE1Q9NRR8 79 aa7.8□□□□□ -1.16
SF1-209ENST00000433274 A6NED7 52 aa7.78□□□□□ -1.16
SF1-209ENST00000433274 PCLOQ9Y6V0 5065 aa7.75□□□□□ -1.17
SF1-209ENST00000433274 LINC01554Q52M75 96 aa7.72□□□□□ -1.17
SF1-209ENST00000433274 SEC61BP60468 96 aaKnown RBP7.7□□□□□ -1.18
SF1-209ENST00000433274 A0A1B0GU69 56 aa7.69□□□□□ -1.18
SF1-209ENST00000433274 HERC1Q15751 4861 aa7.64□□□□□ -1.19
SF1-209ENST00000433274 PRAC1Q96KF2 57 aa7.62□□□□□ -1.19
SF1-209ENST00000433274 S4R3F8 94 aa7.61□□□□□ -1.19
SF1-209ENST00000433274 H1FX-AS1Q4G0G2 97 aa7.61□□□□□ -1.19
SF1-209ENST00000433274 KRTAP4-1Q9BYQ7 146 aa7.59□□□□□ -1.19
SF1-209ENST00000433274 KRTAP3-3Q9BYR6 98 aa7.59□□□□□ -1.19
SF1-209ENST00000433274 MUC17Q685J3 4493 aa7.55□□□□□ -1.2
SF1-209ENST00000433274 HMCN2Q8NDA2 5059 aa7.53□□□□□ -1.2
SF1-209ENST00000433274 ADM2Q7Z4H4 148 aa7.52□□□□□ -1.21
SF1-209ENST00000433274 UQCR11O14957 56 aa7.47□□□□□ -1.21
SF1-209ENST00000433274 MIR22HGQ0VDD5 57 aa7.42□□□□□ -1.22
SF1-209ENST00000433274 MUC2Q02817 5179 aa7.41□□□□□ -1.22
SF1-209ENST00000433274 CSAG1Q6PB30 78 aa7.4□□□□□ -1.22
SF1-209ENST00000433274 A0A1B0GU33 70 aa7.4□□□□□ -1.23
SF1-209ENST00000433274 SPATA8Q6RVD6 105 aa7.39□□□□□ -1.23
SF1-209ENST00000433274 KRTAP19-2Q3LHN2 52 aa7.37□□□□□ -1.23
SF1-209ENST00000433274 KRTAP10-6P60371 365 aaPredicted RBP7.36□□□□□ -1.23
SF1-209ENST00000433274 KRTAP3-2Q9BYR7 98 aa7.35□□□□□ -1.23
SF1-209ENST00000433274 H0YAA0 97 aa7.33□□□□□ -1.24
SF1-209ENST00000433274 P0C880 135 aa7.31□□□□□ -1.24
SF1-209ENST00000433274 KRTAP13-4Q3LI77 160 aa7.22□□□□□ -1.25
SF1-209ENST00000433274 UBR4Q5T4S7 5183 aa7.21□□□□□ -1.25
SF1-209ENST00000433274 ROMO1P60602 79 aa7.21□□□□□ -1.26
SF1-209ENST00000433274 FLGP20930 4061 aaPredicted RBP7.19□□□□□ -1.26
SF1-209ENST00000433274 A0A0A0MQY5 61 aa7.16□□□□□ -1.26
SF1-209ENST00000433274 RNF213Q63HN8 5207 aa7.16□□□□□ -1.26
SF1-209ENST00000433274 LCE2CQ5TA81 110 aa7.14□□□□□ -1.27
SF1-209ENST00000433274 A0A0D9SG42 100 aa7.13□□□□□ -1.27
SF1-209ENST00000433274 FAT4Q6V0I7 4981 aa7.08□□□□□ -1.28
SF1-209ENST00000433274 M0QZ58 72 aa7.07□□□□□ -1.28
SF1-209ENST00000433274 LORP23490 312 aaPredicted RBP7.05□□□□□ -1.28
SF1-209ENST00000433274 KRTAP25-1Q3LHN0 102 aa7.05□□□□□ -1.28
SF1-209ENST00000433274 R4GN34 69 aa7.04□□□□□ -1.28
SF1-209ENST00000433274 K7ERS5 55 aa7.02□□□□□ -1.28
SF1-209ENST00000433274 MT1HP80294 61 aa6.99□□□□□ -1.29
SF1-209ENST00000433274 M0R2T5 61 aa6.99□□□□□ -1.29
SF1-209ENST00000433274 KRTAP12-2P59991 146 aa6.95□□□□□ -1.3
SF1-209ENST00000433274 SPINT4Q6UDR6 99 aa6.94□□□□□ -1.3
SF1-209ENST00000433274 KRTAP12-1P59990 96 aa6.93□□□□□ -1.3
SF1-209ENST00000433274 CRIPTQ9P021 101 aa6.83□□□□□ -1.32
SF1-209ENST00000433274 MT2AP02795 61 aa6.76□□□□□ -1.33
SF1-209ENST00000433274 KRTAP9-8Q9BYQ0 159 aa6.75□□□□□ -1.33
SF1-209ENST00000433274 MT1FP04733 61 aa6.74□□□□□ -1.33
SF1-209ENST00000433274 KRTAP10-10P60014 251 aa6.73□□□□□ -1.33
SF1-209ENST00000433274 NDUFAF8A1L188 74 aa6.73□□□□□ -1.33
SF1-209ENST00000433274 KRTAP19-1Q8IUB9 90 aa6.67□□□□□ -1.34
SF1-209ENST00000433274 SPRR2GQ9BYE4 73 aa6.67□□□□□ -1.34
SF1-209ENST00000433274 KRTAP15-1Q3LI76 137 aa6.62□□□□□ -1.35
SF1-209ENST00000433274 CAMK2N1Q7Z7J9 78 aa6.62□□□□□ -1.35
SF1-209ENST00000433274 LCE2AQ5TA79 106 aaPredicted RBP6.56□□□□□ -1.36
SF1-209ENST00000433274 C10orf95Q9H7T3 257 aa6.56□□□□□ -1.36
SF1-209ENST00000433274 PLAC4Q8WY50 150 aa6.53□□□□□ -1.36
SF1-209ENST00000433274 LUZP6Q538Z0 58 aa6.53□□□□□ -1.36
SF1-209ENST00000433274 KRTAP9-3Q9BYQ3 159 aa6.5□□□□□ -1.37
SF1-209ENST00000433274 KRTAP19-8Q3LI54 63 aa6.47□□□□□ -1.37
SF1-209ENST00000433274 MT1BP07438 61 aa6.4□□□□□ -1.38
SF1-209ENST00000433274 LCE2BO14633 110 aa6.31□□□□□ -1.4
SF1-209ENST00000433274 TNP1P09430 55 aa6.3□□□□□ -1.4
SF1-209ENST00000433274 MT1XP80297 61 aa6.24□□□□□ -1.41
SF1-209ENST00000433274 KRTAP10-5P60370 271 aa6.24□□□□□ -1.41
SF1-209ENST00000433274 PP632Q6XCG6 107 aa6.17□□□□□ -1.42
SF1-209ENST00000433274 USH2AO75445 5202 aa6.14□□□□□ -1.43
SF1-209ENST00000433274 PRO2289Q9P1D8 64 aa6.11□□□□□ -1.43
SF1-209ENST00000433274 KRTAP23-1A1A580 65 aa6.08□□□□□ -1.44
SF1-209ENST00000433274 LCE3AQ5TA76 89 aa6.03□□□□□ -1.44
SF1-209ENST00000433274 KRTAP10-7P60409 375 aaPredicted RBP6.03□□□□□ -1.44
SF1-209ENST00000433274 KRTAP10-12P60413 245 aa5.98□□□□□ -1.45
SF1-209ENST00000433274 SSPOA2VEC9 5147 aa5.89□□□□□ -1.47
SF1-209ENST00000433274 FSIP2Q5CZC0 6907 aa5.87□□□□□ -1.47
SF1-209ENST00000433274 KRTAP8-1Q8IUC2 63 aa5.87□□□□□ -1.47
SF1-209ENST00000433274 LCE2DQ5TA82 110 aaPredicted RBP5.86□□□□□ -1.47
SF1-209ENST00000433274 KRTAP19-6Q3LI70 58 aa5.83□□□□□ -1.48
SF1-209ENST00000433274 KMT2DO14686 5537 aa5.77□□□□□ -1.49
SF1-209ENST00000433274 KRTAP4-8A0A0G2JLE6 195 aa5.77□□□□□ -1.49
SF1-209ENST00000433274 KRTAP12-3P60328 96 aa5.77□□□□□ -1.49
SF1-209ENST00000433274 KRTAP4-8Q9BYQ9 185 aa5.77□□□□□ -1.49
SF1-209ENST00000433274 KRTAP19-5Q3LI72 72 aa5.7□□□□□ -1.5
SF1-209ENST00000433274 FCGBPQ9Y6R7 5405 aaPredicted RBP5.6□□□□□ -1.51
SF1-209ENST00000433274 KRTAP9-2Q9BYQ4 174 aa5.59□□□□□ -1.51
SF1-209ENST00000433274 KRTAP19-7Q3SYF9 63 aa5.56□□□□□ -1.52
SF1-209ENST00000433274 SPRR5A0A1B0GTR4 108 aa5.54□□□□□ -1.52
SF1-209ENST00000433274 KRTAP9-6A0A140TA67 174 aa5.49□□□□□ -1.53
SF1-209ENST00000433274 MT1EP04732 61 aa5.45□□□□□ -1.54
SF1-209ENST00000433274 INE1O15225 51 aa5.43□□□□□ -1.54
SF1-209ENST00000433274 CRCT1Q9UGL9 99 aa5.41□□□□□ -1.54
SF1-209ENST00000433274 LCE3CQ5T5A8 94 aa5.4□□□□□ -1.55
SF1-209ENST00000433274 MT1LQ93083 61 aa5.36□□□□□ -1.55
SF1-209ENST00000433274 MACF1Q9UPN3 7388 aaKnown RBP5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms