RNA–Protein interactions for RNA: ENST00000430687.1

CDC42EP1-203, Transcript of CDC42 effector protein 1, humanhuman

APPRIS ALT2 TSL 3

Gene CDC42EP1, Length 720 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-203ENST00000430687 CRCT1Q9UGL9 99 aa8.64□□□□□ -1.03
CDC42EP1-203ENST00000430687 DMAC1Q96GE9 116 aa8.63□□□□□ -1.03
CDC42EP1-203ENST00000430687 MT2AP02795 61 aa8.62□□□□□ -1.03
CDC42EP1-203ENST00000430687 KRTAP3-3Q9BYR6 98 aa8.6□□□□□ -1.03
CDC42EP1-203ENST00000430687 NDUFC1O43677 76 aa8.56□□□□□ -1.04
CDC42EP1-203ENST00000430687 ANAPC13Q9BS18 74 aa8.56□□□□□ -1.04
CDC42EP1-203ENST00000430687 SPANXA2-OT1Q8N9U9 137 aa8.55□□□□□ -1.04
CDC42EP1-203ENST00000430687 MT1FP04733 61 aa8.54□□□□□ -1.04
CDC42EP1-203ENST00000430687 KRTAP10-10P60014 251 aa8.54□□□□□ -1.04
CDC42EP1-203ENST00000430687 ACYP2P14621 99 aa8.52□□□□□ -1.05
CDC42EP1-203ENST00000430687 FSIP2Q5CZC0 6907 aa8.47□□□□□ -1.05
CDC42EP1-203ENST00000430687 KRTAP9-3Q9BYQ3 159 aa8.42□□□□□ -1.06
CDC42EP1-203ENST00000430687 H0YAA0 97 aa8.4□□□□□ -1.06
CDC42EP1-203ENST00000430687 H7BZZ5 65 aa8.4□□□□□ -1.06
CDC42EP1-203ENST00000430687 CYSTM1Q9H1C7 97 aa8.37□□□□□ -1.07
CDC42EP1-203ENST00000430687 SPTSSBQ8NFR3 76 aa8.35□□□□□ -1.07
CDC42EP1-203ENST00000430687 CHKB-CPT1BH3BT56 60 aa8.34□□□□□ -1.07
CDC42EP1-203ENST00000430687 CCDC179H3BU77 68 aa8.34□□□□□ -1.07
CDC42EP1-203ENST00000430687 LCE2BO14633 110 aa8.26□□□□□ -1.09
CDC42EP1-203ENST00000430687 ADM2Q7Z4H4 148 aa8.26□□□□□ -1.09
CDC42EP1-203ENST00000430687 CRIPTQ9P021 101 aa8.26□□□□□ -1.09
CDC42EP1-203ENST00000430687 COA5Q86WW8 74 aa8.24□□□□□ -1.09
CDC42EP1-203ENST00000430687 KRTAP19-1Q8IUB9 90 aa8.19□□□□□ -1.1
CDC42EP1-203ENST00000430687 SPRR2GQ9BYE4 73 aa8.19□□□□□ -1.1
CDC42EP1-203ENST00000430687 ATP5EP56381 51 aaPredicted RBP8.18□□□□□ -1.1
CDC42EP1-203ENST00000430687 USH2AO75445 5202 aa8.15□□□□□ -1.1
CDC42EP1-203ENST00000430687 KRTAP3-2Q9BYR7 98 aa8.14□□□□□ -1.11
CDC42EP1-203ENST00000430687 PCP4P48539 62 aa8.12□□□□□ -1.11
CDC42EP1-203ENST00000430687 P0C880 135 aa8.11□□□□□ -1.11
CDC42EP1-203ENST00000430687 TMEM258P61165 79 aa8.11□□□□□ -1.11
CDC42EP1-203ENST00000430687 KRTAP9-7A8MTY7 169 aa8.09□□□□□ -1.11
CDC42EP1-203ENST00000430687 KRTAP19-8Q3LI54 63 aa8.07□□□□□ -1.12
CDC42EP1-203ENST00000430687 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.04□□□□□ -1.12
CDC42EP1-203ENST00000430687 R4GN34 69 aa8.04□□□□□ -1.12
CDC42EP1-203ENST00000430687 Q5VV11 94 aa8.02□□□□□ -1.13
CDC42EP1-203ENST00000430687 M0QZ58 72 aa7.97□□□□□ -1.13
CDC42EP1-203ENST00000430687 MT1BP07438 61 aa7.97□□□□□ -1.13
CDC42EP1-203ENST00000430687 SEC61GP60059 68 aa7.97□□□□□ -1.13
CDC42EP1-203ENST00000430687 SSPOA2VEC9 5147 aa7.96□□□□□ -1.14
CDC42EP1-203ENST00000430687 KRTAP19-6Q3LI70 58 aa7.94□□□□□ -1.14
CDC42EP1-203ENST00000430687 SERP1Q9Y6X1 66 aa7.94□□□□□ -1.14
CDC42EP1-203ENST00000430687 A0A1B0GU69 56 aa7.83□□□□□ -1.16
CDC42EP1-203ENST00000430687 LINC01554Q52M75 96 aa7.8□□□□□ -1.16
CDC42EP1-203ENST00000430687 PLAC4Q8WY50 150 aa7.79□□□□□ -1.16
CDC42EP1-203ENST00000430687 A0A1B0GU33 70 aa7.78□□□□□ -1.16
CDC42EP1-203ENST00000430687 LINC01558Q9Y6Z2 57 aa7.76□□□□□ -1.17
CDC42EP1-203ENST00000430687 FCGBPQ9Y6R7 5405 aaPredicted RBP7.75□□□□□ -1.17
CDC42EP1-203ENST00000430687 KRTAP13-4Q3LI77 160 aa7.75□□□□□ -1.17
CDC42EP1-203ENST00000430687 PRR15LQ9BU68 103 aa7.74□□□□□ -1.17
CDC42EP1-203ENST00000430687 A6NN06 94 aa7.73□□□□□ -1.17
CDC42EP1-203ENST00000430687 KRTAP10-5P60370 271 aa7.72□□□□□ -1.17
CDC42EP1-203ENST00000430687 SPATA8Q6RVD6 105 aa7.64□□□□□ -1.19
CDC42EP1-203ENST00000430687 PRO2289Q9P1D8 64 aa7.64□□□□□ -1.19
CDC42EP1-203ENST00000430687 V9GYY9 64 aa7.62□□□□□ -1.19
CDC42EP1-203ENST00000430687 RPS28P62857 69 aaKnown RBP7.61□□□□□ -1.19
CDC42EP1-203ENST00000430687 MT1XP80297 61 aa7.58□□□□□ -1.2
CDC42EP1-203ENST00000430687 SMIM26A0A096LP01 95 aa7.57□□□□□ -1.2
CDC42EP1-203ENST00000430687 Q1T7F1 81 aa7.56□□□□□ -1.2
CDC42EP1-203ENST00000430687 A0A0D9SG42 100 aa7.55□□□□□ -1.2
CDC42EP1-203ENST00000430687 UQCR11O14957 56 aa7.5□□□□□ -1.21
CDC42EP1-203ENST00000430687 MACF1Q9UPN3 7388 aaKnown RBP7.48□□□□□ -1.21
CDC42EP1-203ENST00000430687 KRTAP12-1P59990 96 aa7.45□□□□□ -1.22
CDC42EP1-203ENST00000430687 CAMK2N1Q7Z7J9 78 aa7.45□□□□□ -1.22
CDC42EP1-203ENST00000430687 A8MU10 97 aa7.44□□□□□ -1.22
CDC42EP1-203ENST00000430687 SPINT4Q6UDR6 99 aa7.44□□□□□ -1.22
CDC42EP1-203ENST00000430687 PSPHP1O15172 72 aa7.42□□□□□ -1.22
CDC42EP1-203ENST00000430687 SYNE2Q8WXH0 6885 aaKnown RBP7.41□□□□□ -1.22
CDC42EP1-203ENST00000430687 KRTAP6-3Q3LI67 103 aa7.4□□□□□ -1.22
CDC42EP1-203ENST00000430687 KRTAP12-2P59991 146 aa7.38□□□□□ -1.23
CDC42EP1-203ENST00000430687 MIR22HGQ0VDD5 57 aa7.35□□□□□ -1.23
CDC42EP1-203ENST00000430687 KRTAP10-12P60413 245 aa7.23□□□□□ -1.25
CDC42EP1-203ENST00000430687 A6NED7 52 aa7.22□□□□□ -1.25
CDC42EP1-203ENST00000430687 KRTAP10-7P60409 375 aaPredicted RBP7.22□□□□□ -1.25
CDC42EP1-203ENST00000430687 K7ERS5 55 aa7.15□□□□□ -1.26
CDC42EP1-203ENST00000430687 KRTAP5-9P26371 169 aa7.11□□□□□ -1.27
CDC42EP1-203ENST00000430687 KRTAP8-1Q8IUC2 63 aa7.1□□□□□ -1.27
CDC42EP1-203ENST00000430687 KRTAP4-8A0A0G2JLE6 195 aa7.09□□□□□ -1.27
CDC42EP1-203ENST00000430687 KRTAP4-8Q9BYQ9 185 aa7.09□□□□□ -1.27
CDC42EP1-203ENST00000430687 KRTAP20-1Q3LI63 56 aa7.08□□□□□ -1.28
CDC42EP1-203ENST00000430687 C10orf95Q9H7T3 257 aa7.07□□□□□ -1.28
CDC42EP1-203ENST00000430687 KMT2DO14686 5537 aa7.05□□□□□ -1.28
CDC42EP1-203ENST00000430687 CDC42SE1Q9NRR8 79 aa7.02□□□□□ -1.29
CDC42EP1-203ENST00000430687 TNP1P09430 55 aa7.01□□□□□ -1.29
CDC42EP1-203ENST00000430687 NEBP20929 6669 aa6.98□□□□□ -1.29
CDC42EP1-203ENST00000430687 SPRR2FQ96RM1 72 aa6.96□□□□□ -1.3
CDC42EP1-203ENST00000430687 MUC12Q9UKN1 5478 aa6.95□□□□□ -1.3
CDC42EP1-203ENST00000430687 KRTAP25-1Q3LHN0 102 aa6.85□□□□□ -1.31
CDC42EP1-203ENST00000430687 KRTAP2-3P0C7H8 128 aa6.78□□□□□ -1.32
CDC42EP1-203ENST00000430687 KRTAP2-4Q9BYR9 128 aa6.78□□□□□ -1.32
CDC42EP1-203ENST00000430687 KRTAP19-7Q3SYF9 63 aa6.77□□□□□ -1.33
CDC42EP1-203ENST00000430687 LCE3AQ5TA76 89 aa6.77□□□□□ -1.33
CDC42EP1-203ENST00000430687 MDN1Q9NU22 5596 aa6.76□□□□□ -1.33
CDC42EP1-203ENST00000430687 SPRR2EP22531 72 aa6.76□□□□□ -1.33
CDC42EP1-203ENST00000430687 SPRR2BP35325 72 aa6.76□□□□□ -1.33
CDC42EP1-203ENST00000430687 SPRR2AP35326 72 aa6.76□□□□□ -1.33
CDC42EP1-203ENST00000430687 LCE1AQ5T7P2 110 aa6.74□□□□□ -1.33
CDC42EP1-203ENST00000430687 ROMO1P60602 79 aa6.73□□□□□ -1.33
CDC42EP1-203ENST00000430687 SVIPQ8NHG7 77 aa6.72□□□□□ -1.33
CDC42EP1-203ENST00000430687 KRTAP19-5Q3LI72 72 aa6.71□□□□□ -1.34
CDC42EP1-203ENST00000430687 MT1EP04732 61 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms