RNA–Protein interactions for RNA: ENST00000430593.3

CSNK1A1P1-201, Transcript of casein kinase 1 alpha 1 pseudogene 1, humanhuman

TSL 1 (best) BASIC

Gene CSNK1A1P1, Length 2,147 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P1-201ENST00000430593 KRTAP13-4Q3LI77 160 aa7.3□□□□□ -1.24
CSNK1A1P1-201ENST00000430593 PKD1P98161 4303 aa7.29□□□□□ -1.24
CSNK1A1P1-201ENST00000430593 BIRC6Q9NR09 4857 aa7.27□□□□□ -1.24
CSNK1A1P1-201ENST00000430593 DNAH5Q8TE73 4624 aa7.24□□□□□ -1.25
CSNK1A1P1-201ENST00000430593 A0A0D9SG42 100 aa7.22□□□□□ -1.25
CSNK1A1P1-201ENST00000430593 DYNC1H1Q14204 4646 aaKnown RBP7.21□□□□□ -1.25
CSNK1A1P1-201ENST00000430593 S4R3F8 94 aa7.21□□□□□ -1.25
CSNK1A1P1-201ENST00000430593 XP32Q5T750 250 aa7.18□□□□□ -1.26
CSNK1A1P1-201ENST00000430593 LRP1BQ9NZR2 4599 aa7.18□□□□□ -1.26
CSNK1A1P1-201ENST00000430593 A0A1B0GVY2 172 aa7.18□□□□□ -1.26
CSNK1A1P1-201ENST00000430593 KIAA1109Q2LD37 5005 aa7.15□□□□□ -1.27
CSNK1A1P1-201ENST00000430593 LUZP6Q538Z0 58 aa7.14□□□□□ -1.27
CSNK1A1P1-201ENST00000430593 KRTAP10-2P60368 255 aa7.13□□□□□ -1.27
CSNK1A1P1-201ENST00000430593 C9orf92A6NGG3 77 aa7.13□□□□□ -1.27
CSNK1A1P1-201ENST00000430593 KRTAP12-2P59991 146 aa7.12□□□□□ -1.27
CSNK1A1P1-201ENST00000430593 APOBP04114 4563 aaKnown RBP7.09□□□□□ -1.27
CSNK1A1P1-201ENST00000430593 RYR1P21817 5038 aa7.09□□□□□ -1.27
CSNK1A1P1-201ENST00000430593 VPS13BQ7Z7G8 4022 aa7.09□□□□□ -1.27
CSNK1A1P1-201ENST00000430593 KRTAP10-1P60331 282 aa7.07□□□□□ -1.28
CSNK1A1P1-201ENST00000430593 HERC2O95714 4834 aa7.07□□□□□ -1.28
CSNK1A1P1-201ENST00000430593 KRTAP12-1P59990 96 aa7.07□□□□□ -1.28
CSNK1A1P1-201ENST00000430593 HSPG2P98160 4391 aa7.06□□□□□ -1.28
CSNK1A1P1-201ENST00000430593 SEC61BP60468 96 aaKnown RBP7.03□□□□□ -1.28
CSNK1A1P1-201ENST00000430593 PKHD1L1Q86WI1 4243 aa7□□□□□ -1.29
CSNK1A1P1-201ENST00000430593 DMBT1Q9UGM3 2413 aaPredicted RBP6.99□□□□□ -1.29
CSNK1A1P1-201ENST00000430593 FAT1Q14517 4588 aa6.99□□□□□ -1.29
CSNK1A1P1-201ENST00000430593 ABCA13Q86UQ4 5058 aa6.93□□□□□ -1.3
CSNK1A1P1-201ENST00000430593 M0QZ58 72 aa6.91□□□□□ -1.3
CSNK1A1P1-201ENST00000430593 PLAC4Q8WY50 150 aa6.91□□□□□ -1.3
CSNK1A1P1-201ENST00000430593 PCLOQ9Y6V0 5065 aa6.9□□□□□ -1.3
CSNK1A1P1-201ENST00000430593 KRTAP17-1Q9BYP8 105 aa6.9□□□□□ -1.3
CSNK1A1P1-201ENST00000430593 LCE2BO14633 110 aa6.89□□□□□ -1.31
CSNK1A1P1-201ENST00000430593 LCE2CQ5TA81 110 aa6.89□□□□□ -1.31
CSNK1A1P1-201ENST00000430593 KRTAP23-1A1A580 65 aa6.85□□□□□ -1.31
CSNK1A1P1-201ENST00000430593 SMR3BP02814 79 aaPredicted RBP6.84□□□□□ -1.31
CSNK1A1P1-201ENST00000430593 KRTAP4-5Q9BYR2 181 aa6.84□□□□□ -1.31
CSNK1A1P1-201ENST00000430593 LCE2AQ5TA79 106 aaPredicted RBP6.83□□□□□ -1.32
CSNK1A1P1-201ENST00000430593 KRTAP10-8P60410 259 aa6.79□□□□□ -1.32
CSNK1A1P1-201ENST00000430593 Q5VSD8 79 aa6.79□□□□□ -1.32
CSNK1A1P1-201ENST00000430593 MYCBP2O75592 4640 aa6.78□□□□□ -1.32
CSNK1A1P1-201ENST00000430593 KRTAP10-4P60372 401 aaPredicted RBP6.74□□□□□ -1.33
CSNK1A1P1-201ENST00000430593 LRP1Q07954 4544 aaKnown RBP6.74□□□□□ -1.33
CSNK1A1P1-201ENST00000430593 TNXBP22105 4242 aa6.68□□□□□ -1.34
CSNK1A1P1-201ENST00000430593 PP632Q6XCG6 107 aa6.67□□□□□ -1.34
CSNK1A1P1-201ENST00000430593 FAT3Q8TDW7 4589 aa6.67□□□□□ -1.34
CSNK1A1P1-201ENST00000430593 HERC1Q15751 4861 aa6.64□□□□□ -1.35
CSNK1A1P1-201ENST00000430593 LORP23490 312 aaPredicted RBP6.55□□□□□ -1.36
CSNK1A1P1-201ENST00000430593 R4GN34 69 aa6.5□□□□□ -1.37
CSNK1A1P1-201ENST00000430593 SPRR5A0A1B0GTR4 108 aa6.48□□□□□ -1.37
CSNK1A1P1-201ENST00000430593 MT1HL1P0DM35 61 aa6.46□□□□□ -1.38
CSNK1A1P1-201ENST00000430593 CAMK2N1Q7Z7J9 78 aa6.44□□□□□ -1.38
CSNK1A1P1-201ENST00000430593 HMCN2Q8NDA2 5059 aa6.42□□□□□ -1.38
CSNK1A1P1-201ENST00000430593 PRO2289Q9P1D8 64 aa6.37□□□□□ -1.39
CSNK1A1P1-201ENST00000430593 LRP2P98164 4655 aa6.28□□□□□ -1.4
CSNK1A1P1-201ENST00000430593 UBR4Q5T4S7 5183 aa6.25□□□□□ -1.41
CSNK1A1P1-201ENST00000430593 LPAP08519 4548 aa6.23□□□□□ -1.41
CSNK1A1P1-201ENST00000430593 INE1O15225 51 aa6.2□□□□□ -1.42
CSNK1A1P1-201ENST00000430593 TNP1P09430 55 aa6.14□□□□□ -1.43
CSNK1A1P1-201ENST00000430593 RNF213Q63HN8 5207 aa6.1□□□□□ -1.43
CSNK1A1P1-201ENST00000430593 MUC2Q02817 5179 aa6.01□□□□□ -1.45
CSNK1A1P1-201ENST00000430593 LOC100996750A0A140TA64 210 aa5.99□□□□□ -1.45
CSNK1A1P1-201ENST00000430593 KRTAP4-6Q9BYQ5 205 aa5.99□□□□□ -1.45
CSNK1A1P1-201ENST00000430593 MUC17Q685J3 4493 aa5.95□□□□□ -1.46
CSNK1A1P1-201ENST00000430593 FLGP20930 4061 aaPredicted RBP5.89□□□□□ -1.47
CSNK1A1P1-201ENST00000430593 KRTAP19-2Q3LHN2 52 aa5.85□□□□□ -1.47
CSNK1A1P1-201ENST00000430593 FAT4Q6V0I7 4981 aa5.8□□□□□ -1.48
CSNK1A1P1-201ENST00000430593 KRTAP4-1Q9BYQ7 146 aa5.8□□□□□ -1.48
CSNK1A1P1-201ENST00000430593 LCE3AQ5TA76 89 aa5.69□□□□□ -1.5
CSNK1A1P1-201ENST00000430593 KRTAP8-1Q8IUC2 63 aa5.66□□□□□ -1.5
CSNK1A1P1-201ENST00000430593 SPRR2GQ9BYE4 73 aa5.59□□□□□ -1.51
CSNK1A1P1-201ENST00000430593 KRTAP10-12P60413 245 aa5.51□□□□□ -1.53
CSNK1A1P1-201ENST00000430593 MT1HP80294 61 aa5.47□□□□□ -1.53
CSNK1A1P1-201ENST00000430593 KRTAP19-1Q8IUB9 90 aa5.47□□□□□ -1.53
CSNK1A1P1-201ENST00000430593 KRTAP19-4Q3LI73 84 aa5.46□□□□□ -1.54
CSNK1A1P1-201ENST00000430593 KRTAP10-10P60014 251 aa5.43□□□□□ -1.54
CSNK1A1P1-201ENST00000430593 KRTAP12-3P60328 96 aa5.43□□□□□ -1.54
CSNK1A1P1-201ENST00000430593 M0R2T5 61 aa5.38□□□□□ -1.55
CSNK1A1P1-201ENST00000430593 KRTAP10-5P60370 271 aa5.33□□□□□ -1.56
CSNK1A1P1-201ENST00000430593 KRTAP9-2Q9BYQ4 174 aa5.3□□□□□ -1.56
CSNK1A1P1-201ENST00000430593 FSIP2Q5CZC0 6907 aa5.25□□□□□ -1.57
CSNK1A1P1-201ENST00000430593 KRTAP19-8Q3LI54 63 aa5.24□□□□□ -1.57
CSNK1A1P1-201ENST00000430593 KRTAP9-8Q9BYQ0 159 aa5.23□□□□□ -1.57
CSNK1A1P1-201ENST00000430593 MT1XP80297 61 aa5.21□□□□□ -1.58
CSNK1A1P1-201ENST00000430593 LCE3CQ5T5A8 94 aa5.17□□□□□ -1.58
CSNK1A1P1-201ENST00000430593 MT2AP02795 61 aa5.15□□□□□ -1.58
CSNK1A1P1-201ENST00000430593 KRTAP2-3P0C7H8 128 aa5.14□□□□□ -1.59
CSNK1A1P1-201ENST00000430593 KRTAP2-4Q9BYR9 128 aa5.14□□□□□ -1.59
CSNK1A1P1-201ENST00000430593 KRTAP2-1Q9BYU5 128 aa5.14□□□□□ -1.59
CSNK1A1P1-201ENST00000430593 MT1FP04733 61 aa5.13□□□□□ -1.59
CSNK1A1P1-201ENST00000430593 MT1BP07438 61 aa5.09□□□□□ -1.59
CSNK1A1P1-201ENST00000430593 USH2AO75445 5202 aa5.08□□□□□ -1.6
CSNK1A1P1-201ENST00000430593 KRTAP10-7P60409 375 aaPredicted RBP5.06□□□□□ -1.6
CSNK1A1P1-201ENST00000430593 KRTAP9-6A0A140TA67 174 aa5.05□□□□□ -1.6
CSNK1A1P1-201ENST00000430593 KRTAP9-3Q9BYQ3 159 aa5.05□□□□□ -1.6
CSNK1A1P1-201ENST00000430593 KRTAP4-8Q9BYQ9 185 aa5.03□□□□□ -1.6
CSNK1A1P1-201ENST00000430593 SSPOA2VEC9 5147 aa5.02□□□□□ -1.61
CSNK1A1P1-201ENST00000430593 CRCT1Q9UGL9 99 aa5.02□□□□□ -1.61
CSNK1A1P1-201ENST00000430593 KRTAP9-6A8MVA2 160 aa5□□□□□ -1.61
CSNK1A1P1-201ENST00000430593 KRTAP19-5Q3LI72 72 aa4.97□□□□□ -1.61
CSNK1A1P1-201ENST00000430593 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms