RNA–Protein interactions for RNA: ENST00000430593.3

CSNK1A1P1-201, Transcript of casein kinase 1 alpha 1 pseudogene 1, humanhuman

TSL 1 (best) BASIC

Gene CSNK1A1P1, Length 2,147 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P1-201ENST00000430593 NISCHQ9Y2I1 1504 aa25.78■■□□□ 1.72
CSNK1A1P1-201ENST00000430593 HRCP23327 699 aa23.81■■□□□ 1.4
CSNK1A1P1-201ENST00000430593 PELP1Q8IZL8 1130 aaKnown RBP23.8■■□□□ 1.4
CSNK1A1P1-201ENST00000430593 MYT1Q01538 1121 aa23.09■■□□□ 1.29
CSNK1A1P1-201ENST00000430593 PPARGC1BQ86YN6 1023 aaKnown RBP22.91■■□□□ 1.26
CSNK1A1P1-201ENST00000430593 CCDC180Q9P1Z9 1646 aa22.84■■□□□ 1.25
CSNK1A1P1-201ENST00000430593 PCGF6Q9BYE7 350 aa22.83■■□□□ 1.25
CSNK1A1P1-201ENST00000430593 MYO15BQ96JP2 1530 aa22.82■■□□□ 1.24
CSNK1A1P1-201ENST00000430593 DCAF1Q9Y4B6 1507 aa22.73■■□□□ 1.23
CSNK1A1P1-201ENST00000430593 SCAF1Q9H7N4 1312 aaKnown RBP22.6■■□□□ 1.21
CSNK1A1P1-201ENST00000430593 CHIC1Q5VXU3 224 aa22.49■■□□□ 1.19
CSNK1A1P1-201ENST00000430593 SUPT5HO00267 1087 aaKnown RBP22.4■■□□□ 1.18
CSNK1A1P1-201ENST00000430593 ZEB1P37275 1124 aaPredicted RBP22.39■■□□□ 1.17
CSNK1A1P1-201ENST00000430593 SHROOM4Q9ULL8 1493 aa22.33■■□□□ 1.17
CSNK1A1P1-201ENST00000430593 ABCC9O60706 1549 aa22.32■■□□□ 1.16
CSNK1A1P1-201ENST00000430593 TRIM26Q12899 539 aaPredicted RBP22.28■■□□□ 1.16
CSNK1A1P1-201ENST00000430593 ACIN1Q9UKV3 1341 aaKnown RBP22.02■■□□□ 1.12
CSNK1A1P1-201ENST00000430593 ZCCHC6Q5VYS8 1495 aaKnown RBP21.92■■□□□ 1.1
CSNK1A1P1-201ENST00000430593 TTBK1Q5TCY1 1321 aaPredicted RBP21.89■■□□□ 1.1
CSNK1A1P1-201ENST00000430593 NEUROD1Q13562 356 aa21.8■■□□□ 1.08
CSNK1A1P1-201ENST00000430593 LOC105371045A0A1W2PR82 267 aa21.73■■□□□ 1.07
CSNK1A1P1-201ENST00000430593 CENPBP07199 599 aaPredicted RBP21.73■■□□□ 1.07
CSNK1A1P1-201ENST00000430593 GTF3C3Q9Y5Q9 886 aa21.71■■□□□ 1.07
CSNK1A1P1-201ENST00000430593 DCAF8L2P0C7V8 631 aa21.56■■□□□ 1.04
CSNK1A1P1-201ENST00000430593 RB1CC1Q8TDY2 1594 aa21.46■■□□□ 1.03
CSNK1A1P1-201ENST00000430593 NACADO15069 1562 aa21.45■■□□□ 1.02
CSNK1A1P1-201ENST00000430593 DIEXFQ68CQ4 756 aaKnown RBP21.35■■□□□ 1.01
CSNK1A1P1-201ENST00000430593 TRIM41Q8WV44 630 aa21.17■□□□□ 0.98
CSNK1A1P1-201ENST00000430593 BCL11AQ9H165 835 aa21.15■□□□□ 0.98
CSNK1A1P1-201ENST00000430593 CCER1Q8TC90 406 aaPredicted RBP21.07■□□□□ 0.96
CSNK1A1P1-201ENST00000430593 CLSPNQ9HAW4 1339 aa21.07■□□□□ 0.96
CSNK1A1P1-201ENST00000430593 UNC13AQ9UPW8 1703 aa21.01■□□□□ 0.95
CSNK1A1P1-201ENST00000430593 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.01■□□□□ 0.95
CSNK1A1P1-201ENST00000430593 ANP32EQ9BTT0 268 aa21.01■□□□□ 0.95
CSNK1A1P1-201ENST00000430593 ZNF316A6NFI3 1004 aaPredicted RBP20.93■□□□□ 0.94
CSNK1A1P1-201ENST00000430593 FAM9AQ8IZU1 332 aaPredicted RBP20.92■□□□□ 0.94
CSNK1A1P1-201ENST00000430593 SCRIBQ14160 1630 aa20.91■□□□□ 0.94
CSNK1A1P1-201ENST00000430593 PABPN1Q86U42 306 aaKnown RBP eCLIP20.89■□□□□ 0.93
CSNK1A1P1-201ENST00000430593 BICRAQ9NZM4 1560 aa20.84■□□□□ 0.93
CSNK1A1P1-201ENST00000430593 YTHDC1Q96MU7 727 aaKnown RBP20.76■□□□□ 0.91
CSNK1A1P1-201ENST00000430593 WRNQ14191 1432 aaPredicted RBP eCLIP20.73■□□□□ 0.91
CSNK1A1P1-201ENST00000430593 MIER1Q8N108 512 aa20.71■□□□□ 0.91
CSNK1A1P1-201ENST00000430593 TSHZ2Q9NRE2 1034 aa20.7■□□□□ 0.9
CSNK1A1P1-201ENST00000430593 SUPT16HQ9Y5B9 1047 aaKnown RBP20.68■□□□□ 0.9
CSNK1A1P1-201ENST00000430593 CSRNP3Q8WYN3 585 aa20.64■□□□□ 0.89
CSNK1A1P1-201ENST00000430593 RSF1Q96T23 1441 aaPredicted RBP20.64■□□□□ 0.89
CSNK1A1P1-201ENST00000430593 PRKCSHP14314 528 aaPredicted RBP20.57■□□□□ 0.88
CSNK1A1P1-201ENST00000430593 DNAJC5BQ9UF47 199 aa20.42■□□□□ 0.86
CSNK1A1P1-201ENST00000430593 ERICH6Q7L0X2 663 aa20.39■□□□□ 0.85
CSNK1A1P1-201ENST00000430593 CEP162Q5TB80 1403 aa20.3■□□□□ 0.84
CSNK1A1P1-201ENST00000430593 EIF4G1Q04637 1599 aaKnown RBP20.29■□□□□ 0.84
CSNK1A1P1-201ENST00000430593 EHMT2Q96KQ7 1210 aa20.27■□□□□ 0.84
CSNK1A1P1-201ENST00000430593 TNIKQ9UKE5 1360 aa20.22■□□□□ 0.83
CSNK1A1P1-201ENST00000430593 CC2D2AQ9P2K1 1620 aa20.18■□□□□ 0.82
CSNK1A1P1-201ENST00000430593 MYT1LQ9UL68 1186 aa20.17■□□□□ 0.82
CSNK1A1P1-201ENST00000430593 RBM19Q9Y4C8 960 aaKnown RBP20.15■□□□□ 0.82
CSNK1A1P1-201ENST00000430593 APLP2Q06481 763 aa20.14■□□□□ 0.81
CSNK1A1P1-201ENST00000430593 CECR2Q9BXF3 1484 aa20.13■□□□□ 0.81
CSNK1A1P1-201ENST00000430593 EEA1Q15075 1411 aa20.06■□□□□ 0.8
CSNK1A1P1-201ENST00000430593 FANCIQ9NVI1 1328 aa20.04■□□□□ 0.8
CSNK1A1P1-201ENST00000430593 MSH5O43196 834 aa19.99■□□□□ 0.79
CSNK1A1P1-201ENST00000430593 SMARCA4P51532 1647 aa19.98■□□□□ 0.79
CSNK1A1P1-201ENST00000430593 BAZ1AQ9NRL2 1556 aaPredicted RBP19.97■□□□□ 0.79
CSNK1A1P1-201ENST00000430593 FKBP8Q14318 412 aa19.93■□□□□ 0.78
CSNK1A1P1-201ENST00000430593 MROH2BQ7Z745 1585 aa19.92■□□□□ 0.78
CSNK1A1P1-201ENST00000430593 GOLGA3Q08378 1498 aa19.91■□□□□ 0.78
CSNK1A1P1-201ENST00000430593 CCDC88BA6NC98 1476 aa19.88■□□□□ 0.77
CSNK1A1P1-201ENST00000430593 DHX57Q6P158 1386 aaKnown RBP19.88■□□□□ 0.77
CSNK1A1P1-201ENST00000430593 HNRNPUL2Q1KMD3 747 aaKnown RBP19.88■□□□□ 0.77
CSNK1A1P1-201ENST00000430593 ABCC8Q09428 1581 aa19.88■□□□□ 0.77
CSNK1A1P1-201ENST00000430593 BCANQ96GW7 911 aa19.87■□□□□ 0.77
CSNK1A1P1-201ENST00000430593 WIZO95785 1651 aa19.86■□□□□ 0.77
CSNK1A1P1-201ENST00000430593 NEFLP07196 543 aa19.86■□□□□ 0.77
CSNK1A1P1-201ENST00000430593 ATAD2BQ9ULI0 1458 aa19.85■□□□□ 0.77
CSNK1A1P1-201ENST00000430593 ERICH6BQ5W0A0 696 aa19.84■□□□□ 0.77
CSNK1A1P1-201ENST00000430593 SMARCA2P51531 1590 aa19.81■□□□□ 0.76
CSNK1A1P1-201ENST00000430593 NCAPD3P42695 1498 aa19.81■□□□□ 0.76
CSNK1A1P1-201ENST00000430593 SOGA1O94964 1423 aa19.79■□□□□ 0.76
CSNK1A1P1-201ENST00000430593 VPS8Q8N3P4 1428 aa19.79■□□□□ 0.76
CSNK1A1P1-201ENST00000430593 PEG3Q9GZU2 1588 aa19.77■□□□□ 0.76
CSNK1A1P1-201ENST00000430593 KIF21BO75037 1637 aa19.77■□□□□ 0.76
CSNK1A1P1-201ENST00000430593 DEKP35659 375 aaKnown RBP19.76■□□□□ 0.75
CSNK1A1P1-201ENST00000430593 CUX2O14529 1486 aa19.73■□□□□ 0.75
CSNK1A1P1-201ENST00000430593 HMGXB3Q12766 1538 aa19.72■□□□□ 0.75
CSNK1A1P1-201ENST00000430593 CLIP1P30622 1438 aa19.71■□□□□ 0.75
CSNK1A1P1-201ENST00000430593 KCNH8Q96L42 1107 aa19.7■□□□□ 0.74
CSNK1A1P1-201ENST00000430593 BAZ1BQ9UIG0 1483 aaKnown RBP19.69■□□□□ 0.74
CSNK1A1P1-201ENST00000430593 CEP164Q9UPV0 1460 aa19.69■□□□□ 0.74
CSNK1A1P1-201ENST00000430593 UBTFP17480 764 aaKnown RBP19.66■□□□□ 0.74
CSNK1A1P1-201ENST00000430593 ANO8Q9HCE9 1232 aaPredicted RBP19.66■□□□□ 0.74
CSNK1A1P1-201ENST00000430593 TOP2AP11388 1531 aaKnown RBP19.64■□□□□ 0.74
CSNK1A1P1-201ENST00000430593 CCER2I3L3R5 266 aa19.63■□□□□ 0.73
CSNK1A1P1-201ENST00000430593 CDK11AQ9UQ88 783 aaPredicted RBP19.63■□□□□ 0.73
CSNK1A1P1-201ENST00000430593 RUSC2Q8N2Y8 1516 aa19.61■□□□□ 0.73
CSNK1A1P1-201ENST00000430593 ITGAEP38570 1179 aa19.61■□□□□ 0.73
CSNK1A1P1-201ENST00000430593 UBE2Q2Q8WVN8 375 aa19.54■□□□□ 0.72
CSNK1A1P1-201ENST00000430593 RRBP1Q9P2E9 1410 aaKnown RBP19.54■□□□□ 0.72
CSNK1A1P1-201ENST00000430593 PPP1R15AO75807 674 aaPredicted RBP19.48■□□□□ 0.71
CSNK1A1P1-201ENST00000430593 MAPKBP1O60336 1514 aa19.47■□□□□ 0.71
CSNK1A1P1-201ENST00000430593 SALL2Q9Y467 1007 aaPredicted RBP19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms