RNA–Protein interactions for RNA: ENST00000429829.5

XIST-204, X inactive specific transcript, humanhuman

TSL 1 (best) BASIC

Gene XIST, Length 19,275 nt, Biotype lincRNA, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XIST-204ENST00000429829 LYSTQ99698 3801 aa2.05□□□□□ -2.08
XIST-204ENST00000429829 KRTAP10-7P60409 375 aaPredicted RBP2.05□□□□□ -2.08
XIST-204ENST00000429829 DNAH1Q9P2D7 4330 aa2.03□□□□□ -2.08
XIST-204ENST00000429829 KRTAP10-5P60370 271 aa2.02□□□□□ -2.09
XIST-204ENST00000429829 ANK3Q12955 4377 aaKnown RBP2.01□□□□□ -2.09
XIST-204ENST00000429829 HUWE1Q7Z6Z7 4374 aaKnown RBP2.01□□□□□ -2.09
XIST-204ENST00000429829 KRTAP12-3P60328 96 aa2.01□□□□□ -2.09
XIST-204ENST00000429829 DNAH3Q8TD57 4116 aa2□□□□□ -2.09
XIST-204ENST00000429829 KRTAP19-4Q3LI73 84 aa2□□□□□ -2.09
XIST-204ENST00000429829 FRAS1Q86XX4 4008 aa2□□□□□ -2.09
XIST-204ENST00000429829 KRTAP8-1Q8IUC2 63 aa1.99□□□□□ -2.09
XIST-204ENST00000429829 DNAH6Q9C0G6 4158 aa1.98□□□□□ -2.09
XIST-204ENST00000429829 VPS13BQ7Z7G8 4022 aa1.98□□□□□ -2.09
XIST-204ENST00000429829 MYCBP2O75592 4640 aa1.97□□□□□ -2.09
XIST-204ENST00000429829 DNAH17Q9UFH2 4485 aa1.97□□□□□ -2.09
XIST-204ENST00000429829 LORP23490 312 aaPredicted RBP1.96□□□□□ -2.1
XIST-204ENST00000429829 CMYA5Q8N3K9 4069 aa1.95□□□□□ -2.1
XIST-204ENST00000429829 DNAH9Q9NYC9 4486 aa1.94□□□□□ -2.1
XIST-204ENST00000429829 LCE3AQ5TA76 89 aa1.94□□□□□ -2.1
XIST-204ENST00000429829 APOBP04114 4563 aaKnown RBP1.93□□□□□ -2.1
XIST-204ENST00000429829 KRTAP10-4P60372 401 aaPredicted RBP1.93□□□□□ -2.1
XIST-204ENST00000429829 ANK2Q01484 3957 aa1.93□□□□□ -2.1
XIST-204ENST00000429829 FAT1Q14517 4588 aa1.92□□□□□ -2.1
XIST-204ENST00000429829 MT1HL1P0DM35 61 aa1.91□□□□□ -2.1
XIST-204ENST00000429829 HECTD4Q9Y4D8 3996 aa1.91□□□□□ -2.1
XIST-204ENST00000429829 ZNF469Q96JG9 3925 aaPredicted RBP1.9□□□□□ -2.11
XIST-204ENST00000429829 VPS13DQ5THJ4 4388 aa1.87□□□□□ -2.11
XIST-204ENST00000429829 DNAH7Q8WXX0 4024 aa1.87□□□□□ -2.11
XIST-204ENST00000429829 KMT2AQ03164 3969 aa1.86□□□□□ -2.11
XIST-204ENST00000429829 DNAH5Q8TE73 4624 aa1.85□□□□□ -2.11
XIST-204ENST00000429829 LCE3CQ5T5A8 94 aa1.84□□□□□ -2.12
XIST-204ENST00000429829 KRTAP12-4P60329 112 aa1.83□□□□□ -2.12
XIST-204ENST00000429829 SPRR2FQ96RM1 72 aa1.82□□□□□ -2.12
XIST-204ENST00000429829 SPRR2GQ9BYE4 73 aa1.82□□□□□ -2.12
XIST-204ENST00000429829 SACSQ9NZJ4 4579 aa1.82□□□□□ -2.12
XIST-204ENST00000429829 PLECQ15149 4684 aaKnown RBP1.82□□□□□ -2.12
XIST-204ENST00000429829 DYNC2H1Q8NCM8 4307 aaKnown RBP1.82□□□□□ -2.12
XIST-204ENST00000429829 DYNC1H1Q14204 4646 aaKnown RBP1.81□□□□□ -2.12
XIST-204ENST00000429829 LRP1BQ9NZR2 4599 aa1.8□□□□□ -2.12
XIST-204ENST00000429829 MT3P25713 68 aa1.79□□□□□ -2.12
XIST-204ENST00000429829 SPRR2EP22531 72 aa1.78□□□□□ -2.12
XIST-204ENST00000429829 SPRR2BP35325 72 aa1.78□□□□□ -2.12
XIST-204ENST00000429829 SPRR2AP35326 72 aa1.78□□□□□ -2.12
XIST-204ENST00000429829 FLGP20930 4061 aaPredicted RBP1.78□□□□□ -2.12
XIST-204ENST00000429829 PRKDCP78527 4128 aaKnown RBP1.77□□□□□ -2.13
XIST-204ENST00000429829 SPRR2DP22532 72 aa1.75□□□□□ -2.13
XIST-204ENST00000429829 PKHD1L1Q86WI1 4243 aa1.74□□□□□ -2.13
XIST-204ENST00000429829 LRP1Q07954 4544 aaKnown RBP1.74□□□□□ -2.13
XIST-204ENST00000429829 FAT3Q8TDW7 4589 aa1.74□□□□□ -2.13
XIST-204ENST00000429829 PKD1P98161 4303 aa1.71□□□□□ -2.14
XIST-204ENST00000429829 FAT2Q9NYQ8 4349 aa1.69□□□□□ -2.14
XIST-204ENST00000429829 LCE2BO14633 110 aa1.69□□□□□ -2.14
XIST-204ENST00000429829 HSPG2P98160 4391 aa1.68□□□□□ -2.14
XIST-204ENST00000429829 KRTAP19-5Q3LI72 72 aa1.68□□□□□ -2.14
XIST-204ENST00000429829 LCE3BQ5TA77 95 aa1.67□□□□□ -2.14
XIST-204ENST00000429829 KRTAP2-3P0C7H8 128 aa1.65□□□□□ -2.15
XIST-204ENST00000429829 KRTAP2-4Q9BYR9 128 aa1.65□□□□□ -2.15
XIST-204ENST00000429829 KRTAP2-1Q9BYU5 128 aa1.65□□□□□ -2.15
XIST-204ENST00000429829 KRTAP19-8Q3LI54 63 aa1.64□□□□□ -2.15
XIST-204ENST00000429829 KRTAP4-5Q9BYR2 181 aa1.63□□□□□ -2.15
XIST-204ENST00000429829 LCE2CQ5TA81 110 aa1.62□□□□□ -2.15
XIST-204ENST00000429829 LCE3EQ5T5B0 92 aa1.62□□□□□ -2.15
XIST-204ENST00000429829 DNHD1Q96M86 4753 aa1.61□□□□□ -2.15
XIST-204ENST00000429829 KRTAP19-1Q8IUB9 90 aa1.6□□□□□ -2.15
XIST-204ENST00000429829 MT1HP80294 61 aa1.6□□□□□ -2.15
XIST-204ENST00000429829 KRTAP4-1Q9BYQ7 146 aa1.6□□□□□ -2.15
XIST-204ENST00000429829 MUC17Q685J3 4493 aa1.6□□□□□ -2.15
XIST-204ENST00000429829 PKHD1P08F94 4074 aa1.59□□□□□ -2.15
XIST-204ENST00000429829 TNXBP22105 4242 aa1.58□□□□□ -2.16
XIST-204ENST00000429829 MT2AP02795 61 aa1.58□□□□□ -2.16
XIST-204ENST00000429829 STARD9Q9P2P6 4700 aa1.58□□□□□ -2.16
XIST-204ENST00000429829 LCE2DQ5TA82 110 aaPredicted RBP1.58□□□□□ -2.16
XIST-204ENST00000429829 LCE3DQ9BYE3 92 aa1.57□□□□□ -2.16
XIST-204ENST00000429829 PRM1P04553 51 aa1.56□□□□□ -2.16
XIST-204ENST00000429829 LRP2P98164 4655 aa1.56□□□□□ -2.16
XIST-204ENST00000429829 MT1XP80297 61 aa1.54□□□□□ -2.16
XIST-204ENST00000429829 KRTAP9-8Q9BYQ0 159 aa1.54□□□□□ -2.16
XIST-204ENST00000429829 KMT2CQ8NEZ4 4911 aaKnown RBP1.54□□□□□ -2.16
XIST-204ENST00000429829 MT4P47944 62 aa1.54□□□□□ -2.16
XIST-204ENST00000429829 KRTAP9-3Q9BYQ3 159 aa1.54□□□□□ -2.16
XIST-204ENST00000429829 MT1GP13640 62 aa1.53□□□□□ -2.16
XIST-204ENST00000429829 SYNE1Q8NF91 8797 aaKnown RBP1.53□□□□□ -2.16
XIST-204ENST00000429829 RYR1P21817 5038 aa1.53□□□□□ -2.16
XIST-204ENST00000429829 MT1FP04733 61 aa1.52□□□□□ -2.17
XIST-204ENST00000429829 MT1LQ93083 61 aa1.51□□□□□ -2.17
XIST-204ENST00000429829 KRTAP2-2Q9BYT5 123 aa1.5□□□□□ -2.17
XIST-204ENST00000429829 KRTAP19-2Q3LHN2 52 aa1.5□□□□□ -2.17
XIST-204ENST00000429829 MT1EP04732 61 aa1.49□□□□□ -2.17
XIST-204ENST00000429829 LCE1BQ5T7P3 118 aa1.49□□□□□ -2.17
XIST-204ENST00000429829 MT1BP07438 61 aa1.48□□□□□ -2.17
XIST-204ENST00000429829 LCE1DQ5T752 114 aa1.48□□□□□ -2.17
XIST-204ENST00000429829 SYNE2Q8WXH0 6885 aaKnown RBP1.48□□□□□ -2.17
XIST-204ENST00000429829 DSTQ03001 7570 aaKnown RBP1.47□□□□□ -2.17
XIST-204ENST00000429829 LCE1AQ5T7P2 110 aa1.46□□□□□ -2.17
XIST-204ENST00000429829 LCE5AQ5TCM9 118 aa1.46□□□□□ -2.18
XIST-204ENST00000429829 LCE1CQ5T751 118 aa1.44□□□□□ -2.18
XIST-204ENST00000429829 LCE1EQ5T753 118 aa1.44□□□□□ -2.18
XIST-204ENST00000429829 LCE1FQ5T754 118 aa1.44□□□□□ -2.18
XIST-204ENST00000429829 MT1AP04731 61 aa1.44□□□□□ -2.18
XIST-204ENST00000429829 UBR4Q5T4S7 5183 aa1.44□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms