RNA–Protein interactions for RNA: ENST00000429670.2

GYPB-201, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best) BASIC

Gene GYPB, Length 239 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-201ENST00000429670 ITPR1Q14643 2758 aa-0.38□□□□□ -2.47
GYPB-201ENST00000429670 CELSR3Q9NYQ7 3312 aa-0.38□□□□□ -2.47
GYPB-201ENST00000429670 MMP24-AS1A0A0U1RRL7 71 aa-0.38□□□□□ -2.47
GYPB-201ENST00000429670 M0QY20 66 aa-0.38□□□□□ -2.47
GYPB-201ENST00000429670 DEFB1P60022 68 aa-0.38□□□□□ -2.47
GYPB-201ENST00000429670 CLPSL2Q6UWE3 100 aa-0.38□□□□□ -2.47
GYPB-201ENST00000429670 SPENQ96T58 3664 aaKnown RBP-0.39□□□□□ -2.47
GYPB-201ENST00000429670 S100ZQ8WXG8 99 aa-0.39□□□□□ -2.47
GYPB-201ENST00000429670 ABRACLQ9P1F3 81 aa-0.39□□□□□ -2.47
GYPB-201ENST00000429670 DNAH8Q96JB1 4490 aa-0.39□□□□□ -2.47
GYPB-201ENST00000429670 LAMA3Q16787 3333 aa-0.39□□□□□ -2.47
GYPB-201ENST00000429670 MGAQ8IWI9 3026 aa-0.39□□□□□ -2.47
GYPB-201ENST00000429670 KIF21BO75037 1637 aa-0.39□□□□□ -2.47
GYPB-201ENST00000429670 NRXN3Q9Y4C0 1643 aa-0.39□□□□□ -2.47
GYPB-201ENST00000429670 IQGAP1P46940 1657 aa-0.4□□□□□ -2.47
GYPB-201ENST00000429670 ABCA5Q8WWZ7 1642 aa-0.4□□□□□ -2.47
GYPB-201ENST00000429670 SYCP2Q9BX26 1530 aa-0.4□□□□□ -2.47
GYPB-201ENST00000429670 DDX60Q8IY21 1712 aaKnown RBP-0.41□□□□□ -2.47
GYPB-201ENST00000429670 SPTBN5Q9NRC6 3674 aaKnown RBP-0.41□□□□□ -2.47
GYPB-201ENST00000429670 A0A087WWC5 75 aa-0.41□□□□□ -2.48
GYPB-201ENST00000429670 SERF2P84101 59 aa-0.41□□□□□ -2.48
GYPB-201ENST00000429670 KRTAP19-5Q3LI72 72 aa-0.41□□□□□ -2.48
GYPB-201ENST00000429670 WFDC10BQ8IUB3 73 aa-0.41□□□□□ -2.48
GYPB-201ENST00000429670 LINC00308Q8TCZ7 52 aa-0.41□□□□□ -2.48
GYPB-201ENST00000429670 NMES1Q9C002 83 aa-0.41□□□□□ -2.48
GYPB-201ENST00000429670 TMEM167BQ9NRX6 74 aa-0.41□□□□□ -2.48
GYPB-201ENST00000429670 COL6A5A8TX70 2615 aa-0.41□□□□□ -2.48
GYPB-201ENST00000429670 RNF213Q63HN8 5207 aa-0.41□□□□□ -2.48
GYPB-201ENST00000429670 PLECQ15149 4684 aaKnown RBP-0.42□□□□□ -2.48
GYPB-201ENST00000429670 LAMA2P24043 3122 aaKnown RBP-0.42□□□□□ -2.48
GYPB-201ENST00000429670 SRCAPQ6ZRS2 3230 aa-0.43□□□□□ -2.48
GYPB-201ENST00000429670 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.43□□□□□ -2.48
GYPB-201ENST00000429670 IGIPA6NJ69 53 aa-0.43□□□□□ -2.48
GYPB-201ENST00000429670 DNHD1Q96M86 4753 aa-0.43□□□□□ -2.48
GYPB-201ENST00000429670 MYO9AB2RTY4 2548 aa-0.43□□□□□ -2.48
GYPB-201ENST00000429670 BIRC6Q9NR09 4857 aa-0.44□□□□□ -2.48
GYPB-201ENST00000429670 ADGRG4Q8IZF6 3080 aa-0.44□□□□□ -2.48
GYPB-201ENST00000429670 SMIM27A0A1W2PRY6 76 aa-0.44□□□□□ -2.48
GYPB-201ENST00000429670 SMIM5Q71RC9 77 aa-0.44□□□□□ -2.48
GYPB-201ENST00000429670 AGLP35573 1532 aa-0.44□□□□□ -2.48
GYPB-201ENST00000429670 HYDINQ4G0P3 5121 aa-0.45□□□□□ -2.48
GYPB-201ENST00000429670 SMR3BP02814 79 aaPredicted RBP-0.45□□□□□ -2.48
GYPB-201ENST00000429670 CHD7Q9P2D1 2997 aa-0.45□□□□□ -2.48
GYPB-201ENST00000429670 RYR2Q92736 4967 aa-0.46□□□□□ -2.48
GYPB-201ENST00000429670 ERICH3Q5RHP9 1530 aa-0.46□□□□□ -2.48
GYPB-201ENST00000429670 LINC01546A6NGU7 62 aa-0.46□□□□□ -2.48
GYPB-201ENST00000429670 MT1HP80294 61 aa-0.46□□□□□ -2.48
GYPB-201ENST00000429670 LRBAP50851 2863 aa-0.46□□□□□ -2.48
GYPB-201ENST00000429670 ABCC8Q09428 1581 aa-0.47□□□□□ -2.48
GYPB-201ENST00000429670 KRTAP8-1Q8IUC2 63 aa-0.47□□□□□ -2.48
GYPB-201ENST00000429670 CLTCL1P53675 1640 aa-0.47□□□□□ -2.48
GYPB-201ENST00000429670 M0QZ58 72 aa-0.48□□□□□ -2.49
GYPB-201ENST00000429670 TRRAPQ9Y4A5 3859 aa-0.48□□□□□ -2.49
GYPB-201ENST00000429670 NEBP20929 6669 aa-0.49□□□□□ -2.49
GYPB-201ENST00000429670 CEP295Q9C0D2 2601 aa-0.49□□□□□ -2.49
GYPB-201ENST00000429670 SMIM31A0A1B0GVY4 71 aa-0.49□□□□□ -2.49
GYPB-201ENST00000429670 CSMD1Q96PZ7 3565 aa-0.49□□□□□ -2.49
GYPB-201ENST00000429670 CRYBG3Q68DQ2 2970 aa-0.49□□□□□ -2.49
GYPB-201ENST00000429670 DNAH17Q9UFH2 4485 aa-0.49□□□□□ -2.49
GYPB-201ENST00000429670 NFAT5O94916 1531 aa-0.49□□□□□ -2.49
GYPB-201ENST00000429670 ADCY10Q96PN6 1610 aa-0.49□□□□□ -2.49
GYPB-201ENST00000429670 CFAP46Q8IYW2 2715 aa-0.5□□□□□ -2.49
GYPB-201ENST00000429670 A8MTW9 85 aa-0.5□□□□□ -2.49
GYPB-201ENST00000429670 H0YGX0 51 aa-0.5□□□□□ -2.49
GYPB-201ENST00000429670 SPART-AS1P0CW21 52 aa-0.5□□□□□ -2.49
GYPB-201ENST00000429670 PLNP26678 52 aa-0.5□□□□□ -2.49
GYPB-201ENST00000429670 TFF3Q07654 80 aa-0.5□□□□□ -2.49
GYPB-201ENST00000429670 DYNC1H1Q14204 4646 aaKnown RBP-0.5□□□□□ -2.49
GYPB-201ENST00000429670 RYR3Q15413 4870 aa-0.52□□□□□ -2.49
GYPB-201ENST00000429670 EYSQ5T1H1 3165 aa-0.52□□□□□ -2.49
GYPB-201ENST00000429670 DNAH10Q8IVF4 4471 aa-0.52□□□□□ -2.49
GYPB-201ENST00000429670 FANCD2Q9BXW9 1451 aa-0.52□□□□□ -2.49
GYPB-201ENST00000429670 POLR2KP53803 58 aaKnown RBP-0.52□□□□□ -2.49
GYPB-201ENST00000429670 KIAA1109Q2LD37 5005 aa-0.53□□□□□ -2.49
GYPB-201ENST00000429670 TLN1Q9Y490 2541 aaKnown RBP-0.55□□□□□ -2.5
GYPB-201ENST00000429670 DEFB131AP59861 70 aa-0.55□□□□□ -2.5
GYPB-201ENST00000429670 MT1XP80297 61 aa-0.55□□□□□ -2.5
GYPB-201ENST00000429670 MT1EP04732 61 aa-0.58□□□□□ -2.5
GYPB-201ENST00000429670 LEAP2Q969E1 77 aa-0.58□□□□□ -2.5
GYPB-201ENST00000429670 DMXL2Q8TDJ6 3036 aa-0.58□□□□□ -2.5
GYPB-201ENST00000429670 ZFHX4Q86UP3 3567 aa-0.58□□□□□ -2.5
GYPB-201ENST00000429670 SMIM2Q9BVW6 85 aa-0.59□□□□□ -2.5
GYPB-201ENST00000429670 CMC2Q9NRP2 79 aa-0.59□□□□□ -2.5
GYPB-201ENST00000429670 DNAH5Q8TE73 4624 aa-0.59□□□□□ -2.5
GYPB-201ENST00000429670 CSMD2Q7Z408 3487 aa-0.6□□□□□ -2.51
GYPB-201ENST00000429670 MT1LQ93083 61 aa-0.6□□□□□ -2.51
GYPB-201ENST00000429670 TRPM2O94759 1503 aa-0.6□□□□□ -2.51
GYPB-201ENST00000429670 DEFB4AO15263 64 aa-0.61□□□□□ -2.51
GYPB-201ENST00000429670 MT1GP13640 62 aa-0.61□□□□□ -2.51
GYPB-201ENST00000429670 PRUNE2Q8WUY3 3088 aa-0.62□□□□□ -2.51
GYPB-201ENST00000429670 SMG1Q96Q15 3661 aaKnown RBP-0.62□□□□□ -2.51
GYPB-201ENST00000429670 ATMQ13315 3056 aa-0.63□□□□□ -2.51
GYPB-201ENST00000429670 ITPR2Q14571 2701 aa-0.63□□□□□ -2.51
GYPB-201ENST00000429670 IQGAP2Q13576 1575 aa-0.63□□□□□ -2.51
GYPB-201ENST00000429670 NDUFA1O15239 70 aa-0.65□□□□□ -2.51
GYPB-201ENST00000429670 FRYLO94915 3013 aa-0.65□□□□□ -2.51
GYPB-201ENST00000429670 CFAP54Q96N23 3096 aa-0.66□□□□□ -2.51
GYPB-201ENST00000429670 MT1HL1P0DM35 61 aa-0.66□□□□□ -2.52
GYPB-201ENST00000429670 CEP250Q9BV73 2442 aa-0.66□□□□□ -2.52
GYPB-201ENST00000429670 FREM2Q5SZK8 3169 aa-0.67□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms