RNA–Protein interactions for RNA: ENST00000427123.5

SNX17-202, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 2,007 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-202ENST00000427123 DMBT1Q9UGM3 2413 aaPredicted RBP9.99□□□□□ -0.81
SNX17-202ENST00000427123 EPPK1P58107 5090 aaKnown RBP9.96□□□□□ -0.82
SNX17-202ENST00000427123 MYCBP2O75592 4640 aa9.89□□□□□ -0.83
SNX17-202ENST00000427123 A0A1B0GU33 70 aa9.86□□□□□ -0.83
SNX17-202ENST00000427123 TPRXLQ17RH7 258 aa9.85□□□□□ -0.83
SNX17-202ENST00000427123 H1FX-AS1Q4G0G2 97 aa9.85□□□□□ -0.83
SNX17-202ENST00000427123 H0YAA0 97 aa9.83□□□□□ -0.84
SNX17-202ENST00000427123 KRTAP3-3Q9BYR6 98 aa9.8□□□□□ -0.84
SNX17-202ENST00000427123 S4R3F8 94 aa9.79□□□□□ -0.84
SNX17-202ENST00000427123 BIRC6Q9NR09 4857 aa9.76□□□□□ -0.85
SNX17-202ENST00000427123 KRTAP4-5Q9BYR2 181 aa9.72□□□□□ -0.85
SNX17-202ENST00000427123 RBM12B-AS1Q9P1G2 102 aa9.66□□□□□ -0.86
SNX17-202ENST00000427123 KRTAP10-6P60371 365 aaPredicted RBP9.65□□□□□ -0.87
SNX17-202ENST00000427123 KRTAP3-2Q9BYR7 98 aa9.61□□□□□ -0.87
SNX17-202ENST00000427123 ADM2Q7Z4H4 148 aa9.6□□□□□ -0.87
SNX17-202ENST00000427123 PRAC1Q96KF2 57 aa9.6□□□□□ -0.87
SNX17-202ENST00000427123 LRP2P98164 4655 aa9.57□□□□□ -0.88
SNX17-202ENST00000427123 HERC2O95714 4834 aa9.53□□□□□ -0.88
SNX17-202ENST00000427123 LPAP08519 4548 aa9.52□□□□□ -0.88
SNX17-202ENST00000427123 ABCA13Q86UQ4 5058 aa9.52□□□□□ -0.89
SNX17-202ENST00000427123 K7ERS5 55 aa9.51□□□□□ -0.89
SNX17-202ENST00000427123 SEC61BP60468 96 aaKnown RBP9.49□□□□□ -0.89
SNX17-202ENST00000427123 J3QL48 77 aa9.49□□□□□ -0.89
SNX17-202ENST00000427123 KRTAP13-4Q3LI77 160 aa9.48□□□□□ -0.89
SNX17-202ENST00000427123 CSAG1Q6PB30 78 aa9.48□□□□□ -0.89
SNX17-202ENST00000427123 P0C880 135 aa9.47□□□□□ -0.89
SNX17-202ENST00000427123 A0A0D9SG42 100 aa9.37□□□□□ -0.91
SNX17-202ENST00000427123 MUC17Q685J3 4493 aa9.28□□□□□ -0.92
SNX17-202ENST00000427123 KRTAP4-1Q9BYQ7 146 aa9.27□□□□□ -0.93
SNX17-202ENST00000427123 M0QZ58 72 aa9.26□□□□□ -0.93
SNX17-202ENST00000427123 ROMO1P60602 79 aa9.24□□□□□ -0.93
SNX17-202ENST00000427123 LINC01554Q52M75 96 aa9.24□□□□□ -0.93
SNX17-202ENST00000427123 PCLOQ9Y6V0 5065 aa9.22□□□□□ -0.93
SNX17-202ENST00000427123 KRTAP25-1Q3LHN0 102 aa9.21□□□□□ -0.94
SNX17-202ENST00000427123 KRTAP12-2P59991 146 aa9.17□□□□□ -0.94
SNX17-202ENST00000427123 KRTAP12-1P59990 96 aa9.14□□□□□ -0.95
SNX17-202ENST00000427123 KRTAP19-2Q3LHN2 52 aa9.12□□□□□ -0.95
SNX17-202ENST00000427123 SPINT4Q6UDR6 99 aa9.09□□□□□ -0.95
SNX17-202ENST00000427123 CRIPTQ9P021 101 aa9.04□□□□□ -0.96
SNX17-202ENST00000427123 R4GN34 69 aa9.04□□□□□ -0.96
SNX17-202ENST00000427123 LORP23490 312 aaPredicted RBP8.92□□□□□ -0.98
SNX17-202ENST00000427123 HERC1Q15751 4861 aa8.91□□□□□ -0.98
SNX17-202ENST00000427123 HMCN2Q8NDA2 5059 aa8.83□□□□□ -1
SNX17-202ENST00000427123 FLGP20930 4061 aaPredicted RBP8.82□□□□□ -1
SNX17-202ENST00000427123 C10orf95Q9H7T3 257 aa8.81□□□□□ -1
SNX17-202ENST00000427123 MUC2Q02817 5179 aa8.72□□□□□ -1.01
SNX17-202ENST00000427123 LCE2CQ5TA81 110 aa8.66□□□□□ -1.02
SNX17-202ENST00000427123 CAMK2N1Q7Z7J9 78 aa8.56□□□□□ -1.04
SNX17-202ENST00000427123 MT1HP80294 61 aa8.46□□□□□ -1.06
SNX17-202ENST00000427123 M0R2T5 61 aa8.44□□□□□ -1.06
SNX17-202ENST00000427123 RNF213Q63HN8 5207 aa8.41□□□□□ -1.06
SNX17-202ENST00000427123 SPRR2GQ9BYE4 73 aa8.39□□□□□ -1.07
SNX17-202ENST00000427123 UBR4Q5T4S7 5183 aa8.37□□□□□ -1.07
SNX17-202ENST00000427123 FAT4Q6V0I7 4981 aa8.37□□□□□ -1.07
SNX17-202ENST00000427123 KRTAP15-1Q3LI76 137 aa8.32□□□□□ -1.08
SNX17-202ENST00000427123 PP632Q6XCG6 107 aa8.32□□□□□ -1.08
SNX17-202ENST00000427123 KRTAP19-1Q8IUB9 90 aa8.31□□□□□ -1.08
SNX17-202ENST00000427123 MT2AP02795 61 aa8.27□□□□□ -1.09
SNX17-202ENST00000427123 PLAC4Q8WY50 150 aa8.25□□□□□ -1.09
SNX17-202ENST00000427123 MT1FP04733 61 aa8.24□□□□□ -1.09
SNX17-202ENST00000427123 TNP1P09430 55 aa8.23□□□□□ -1.09
SNX17-202ENST00000427123 KRTAP10-10P60014 251 aa8.22□□□□□ -1.09
SNX17-202ENST00000427123 KRTAP9-8Q9BYQ0 159 aa8.22□□□□□ -1.09
SNX17-202ENST00000427123 KRTAP23-1A1A580 65 aa8.13□□□□□ -1.11
SNX17-202ENST00000427123 KRTAP19-8Q3LI54 63 aa8.07□□□□□ -1.12
SNX17-202ENST00000427123 H3BS24 57 aa8□□□□□ -1.13
SNX17-202ENST00000427123 NDUFAF8A1L188 74 aa7.96□□□□□ -1.14
SNX17-202ENST00000427123 MT1BP07438 61 aa7.93□□□□□ -1.14
SNX17-202ENST00000427123 KRTAP9-3Q9BYQ3 159 aa7.89□□□□□ -1.15
SNX17-202ENST00000427123 KRTAP10-5P60370 271 aa7.81□□□□□ -1.16
SNX17-202ENST00000427123 MT1XP80297 61 aa7.81□□□□□ -1.16
SNX17-202ENST00000427123 LCE3AQ5TA76 89 aa7.79□□□□□ -1.16
SNX17-202ENST00000427123 LUZP6Q538Z0 58 aa7.68□□□□□ -1.18
SNX17-202ENST00000427123 LCE2AQ5TA79 106 aaPredicted RBP7.67□□□□□ -1.18
SNX17-202ENST00000427123 KRTAP8-1Q8IUC2 63 aa7.64□□□□□ -1.19
SNX17-202ENST00000427123 SPRR5A0A1B0GTR4 108 aa7.63□□□□□ -1.19
SNX17-202ENST00000427123 PRO2289Q9P1D8 64 aa7.63□□□□□ -1.19
SNX17-202ENST00000427123 KRTAP10-12P60413 245 aa7.61□□□□□ -1.19
SNX17-202ENST00000427123 LCE2BO14633 110 aa7.58□□□□□ -1.2
SNX17-202ENST00000427123 KRTAP10-7P60409 375 aaPredicted RBP7.54□□□□□ -1.2
SNX17-202ENST00000427123 KRTAP12-3P60328 96 aa7.45□□□□□ -1.22
SNX17-202ENST00000427123 USH2AO75445 5202 aa7.2□□□□□ -1.26
SNX17-202ENST00000427123 KRTAP19-5Q3LI72 72 aa7.2□□□□□ -1.26
SNX17-202ENST00000427123 LCE2DQ5TA82 110 aaPredicted RBP7.15□□□□□ -1.27
SNX17-202ENST00000427123 A0A0A0MQY5 61 aa7.1□□□□□ -1.27
SNX17-202ENST00000427123 KRTAP9-2Q9BYQ4 174 aa7.1□□□□□ -1.27
SNX17-202ENST00000427123 KRTAP4-8A0A0G2JLE6 195 aa7.09□□□□□ -1.27
SNX17-202ENST00000427123 KRTAP4-8Q9BYQ9 185 aa7.09□□□□□ -1.27
SNX17-202ENST00000427123 LCE3CQ5T5A8 94 aa7□□□□□ -1.29
SNX17-202ENST00000427123 SSPOA2VEC9 5147 aa6.98□□□□□ -1.29
SNX17-202ENST00000427123 KMT2DO14686 5537 aa6.97□□□□□ -1.29
SNX17-202ENST00000427123 KRTAP19-7Q3SYF9 63 aa6.96□□□□□ -1.3
SNX17-202ENST00000427123 KRTAP19-6Q3LI70 58 aa6.95□□□□□ -1.3
SNX17-202ENST00000427123 FSIP2Q5CZC0 6907 aa6.94□□□□□ -1.3
SNX17-202ENST00000427123 KRTAP19-4Q3LI73 84 aa6.83□□□□□ -1.32
SNX17-202ENST00000427123 MT1EP04732 61 aa6.8□□□□□ -1.32
SNX17-202ENST00000427123 CRCT1Q9UGL9 99 aa6.79□□□□□ -1.32
SNX17-202ENST00000427123 MT1LQ93083 61 aa6.76□□□□□ -1.33
SNX17-202ENST00000427123 KRTAP9-6A0A140TA67 174 aa6.72□□□□□ -1.33
SNX17-202ENST00000427123 KRTAP9-6A8MVA2 160 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms