RNA–Protein interactions for RNA: ENST00000426726.7

RUNDC3A-202, Transcript of RUN domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RUNDC3A, Length 2,048 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-202ENST00000426726 ACYP2P14621 99 aa12.06□□□□□ -0.48
RUNDC3A-202ENST00000426726 KTN1-AS1Q86SY8 53 aa12.06□□□□□ -0.48
RUNDC3A-202ENST00000426726 DMAC1Q96GE9 116 aa12.04□□□□□ -0.48
RUNDC3A-202ENST00000426726 LPAP08519 4548 aa11.92□□□□□ -0.5
RUNDC3A-202ENST00000426726 SEC61BP60468 96 aaKnown RBP11.87□□□□□ -0.51
RUNDC3A-202ENST00000426726 LRP2P98164 4655 aa11.87□□□□□ -0.51
RUNDC3A-202ENST00000426726 COX6B2Q6YFQ2 88 aa11.82□□□□□ -0.52
RUNDC3A-202ENST00000426726 RBM12B-AS1Q9P1G2 102 aa11.8□□□□□ -0.52
RUNDC3A-202ENST00000426726 HERC1Q15751 4861 aa11.77□□□□□ -0.52
RUNDC3A-202ENST00000426726 A0A1B0GU69 56 aa11.77□□□□□ -0.53
RUNDC3A-202ENST00000426726 KRTAP3-1Q9BYR8 98 aa11.77□□□□□ -0.53
RUNDC3A-202ENST00000426726 SPATA8Q6RVD6 105 aa11.71□□□□□ -0.53
RUNDC3A-202ENST00000426726 HMCN2Q8NDA2 5059 aa11.6□□□□□ -0.55
RUNDC3A-202ENST00000426726 UQCR11O14957 56 aa11.6□□□□□ -0.55
RUNDC3A-202ENST00000426726 MIR22HGQ0VDD5 57 aa11.58□□□□□ -0.56
RUNDC3A-202ENST00000426726 MUC17Q685J3 4493 aa11.58□□□□□ -0.56
RUNDC3A-202ENST00000426726 KRTAP4-1Q9BYQ7 146 aa11.54□□□□□ -0.56
RUNDC3A-202ENST00000426726 H1FX-AS1Q4G0G2 97 aa11.52□□□□□ -0.57
RUNDC3A-202ENST00000426726 S4R3F8 94 aa11.46□□□□□ -0.57
RUNDC3A-202ENST00000426726 PRAC1Q96KF2 57 aa11.44□□□□□ -0.58
RUNDC3A-202ENST00000426726 ADM2Q7Z4H4 148 aa11.43□□□□□ -0.58
RUNDC3A-202ENST00000426726 KRTAP3-3Q9BYR6 98 aa11.36□□□□□ -0.59
RUNDC3A-202ENST00000426726 KRTAP19-2Q3LHN2 52 aa11.26□□□□□ -0.61
RUNDC3A-202ENST00000426726 H0YAA0 97 aa11.2□□□□□ -0.62
RUNDC3A-202ENST00000426726 LINC01554Q52M75 96 aa11.18□□□□□ -0.62
RUNDC3A-202ENST00000426726 CSAG1Q6PB30 78 aa11.18□□□□□ -0.62
RUNDC3A-202ENST00000426726 MUC2Q02817 5179 aa11.12□□□□□ -0.63
RUNDC3A-202ENST00000426726 UBR4Q5T4S7 5183 aa11.11□□□□□ -0.63
RUNDC3A-202ENST00000426726 A0A1B0GU33 70 aa11.1□□□□□ -0.63
RUNDC3A-202ENST00000426726 LCE2CQ5TA81 110 aa10.97□□□□□ -0.65
RUNDC3A-202ENST00000426726 KRTAP3-2Q9BYR7 98 aa10.97□□□□□ -0.65
RUNDC3A-202ENST00000426726 KRTAP10-6P60371 365 aaPredicted RBP10.97□□□□□ -0.65
RUNDC3A-202ENST00000426726 RNF213Q63HN8 5207 aa10.96□□□□□ -0.66
RUNDC3A-202ENST00000426726 FLGP20930 4061 aaPredicted RBP10.93□□□□□ -0.66
RUNDC3A-202ENST00000426726 P0C880 135 aa10.87□□□□□ -0.67
RUNDC3A-202ENST00000426726 KRTAP25-1Q3LHN0 102 aa10.84□□□□□ -0.67
RUNDC3A-202ENST00000426726 MT1HP80294 61 aa10.76□□□□□ -0.69
RUNDC3A-202ENST00000426726 K7ERS5 55 aa10.75□□□□□ -0.69
RUNDC3A-202ENST00000426726 M0R2T5 61 aa10.68□□□□□ -0.7
RUNDC3A-202ENST00000426726 KRTAP13-4Q3LI77 160 aa10.67□□□□□ -0.7
RUNDC3A-202ENST00000426726 FAT4Q6V0I7 4981 aa10.67□□□□□ -0.7
RUNDC3A-202ENST00000426726 M0QZ58 72 aa10.65□□□□□ -0.71
RUNDC3A-202ENST00000426726 ROMO1P60602 79 aa10.58□□□□□ -0.72
RUNDC3A-202ENST00000426726 R4GN34 69 aa10.57□□□□□ -0.72
RUNDC3A-202ENST00000426726 CRIPTQ9P021 101 aa10.53□□□□□ -0.72
RUNDC3A-202ENST00000426726 LORP23490 312 aaPredicted RBP10.51□□□□□ -0.73
RUNDC3A-202ENST00000426726 A0A0D9SG42 100 aa10.5□□□□□ -0.73
RUNDC3A-202ENST00000426726 H3BS24 57 aa10.37□□□□□ -0.75
RUNDC3A-202ENST00000426726 KRTAP9-8Q9BYQ0 159 aa10.36□□□□□ -0.75
RUNDC3A-202ENST00000426726 MT2AP02795 61 aa10.36□□□□□ -0.75
RUNDC3A-202ENST00000426726 MT1FP04733 61 aa10.29□□□□□ -0.76
RUNDC3A-202ENST00000426726 KRTAP12-2P59991 146 aa10.29□□□□□ -0.76
RUNDC3A-202ENST00000426726 KRTAP12-1P59990 96 aa10.29□□□□□ -0.76
RUNDC3A-202ENST00000426726 LCE2AQ5TA79 106 aaPredicted RBP10.29□□□□□ -0.76
RUNDC3A-202ENST00000426726 KRTAP10-10P60014 251 aa10.28□□□□□ -0.76
RUNDC3A-202ENST00000426726 SPINT4Q6UDR6 99 aa10.24□□□□□ -0.77
RUNDC3A-202ENST00000426726 SPRR2GQ9BYE4 73 aa10.21□□□□□ -0.77
RUNDC3A-202ENST00000426726 C10orf95Q9H7T3 257 aa10.17□□□□□ -0.78
RUNDC3A-202ENST00000426726 KRTAP19-1Q8IUB9 90 aa10.15□□□□□ -0.78
RUNDC3A-202ENST00000426726 KRTAP9-3Q9BYQ3 159 aa9.99□□□□□ -0.81
RUNDC3A-202ENST00000426726 KRTAP15-1Q3LI76 137 aa9.95□□□□□ -0.82
RUNDC3A-202ENST00000426726 KRTAP19-8Q3LI54 63 aa9.93□□□□□ -0.82
RUNDC3A-202ENST00000426726 CAMK2N1Q7Z7J9 78 aa9.9□□□□□ -0.82
RUNDC3A-202ENST00000426726 PLAC4Q8WY50 150 aa9.9□□□□□ -0.82
RUNDC3A-202ENST00000426726 MT1BP07438 61 aa9.77□□□□□ -0.85
RUNDC3A-202ENST00000426726 LCE2BO14633 110 aa9.69□□□□□ -0.86
RUNDC3A-202ENST00000426726 NDUFAF8A1L188 74 aa9.66□□□□□ -0.86
RUNDC3A-202ENST00000426726 KRTAP9-2Q9BYQ4 174 aa9.63□□□□□ -0.87
RUNDC3A-202ENST00000426726 MT1XP80297 61 aa9.47□□□□□ -0.89
RUNDC3A-202ENST00000426726 KRTAP10-5P60370 271 aa9.46□□□□□ -0.9
RUNDC3A-202ENST00000426726 TNP1P09430 55 aa9.44□□□□□ -0.9
RUNDC3A-202ENST00000426726 PRO2289Q9P1D8 64 aa9.41□□□□□ -0.9
RUNDC3A-202ENST00000426726 LCE2DQ5TA82 110 aaPredicted RBP9.4□□□□□ -0.9
RUNDC3A-202ENST00000426726 FSIP2Q5CZC0 6907 aa9.37□□□□□ -0.91
RUNDC3A-202ENST00000426726 PP632Q6XCG6 107 aa9.35□□□□□ -0.91
RUNDC3A-202ENST00000426726 USH2AO75445 5202 aa9.31□□□□□ -0.92
RUNDC3A-202ENST00000426726 KRTAP9-6A0A140TA67 174 aa9.23□□□□□ -0.93
RUNDC3A-202ENST00000426726 KRTAP23-1A1A580 65 aa9.2□□□□□ -0.94
RUNDC3A-202ENST00000426726 KRTAP19-6Q3LI70 58 aa9.12□□□□□ -0.95
RUNDC3A-202ENST00000426726 CRCT1Q9UGL9 99 aa9.11□□□□□ -0.95
RUNDC3A-202ENST00000426726 KRTAP10-7P60409 375 aaPredicted RBP9.08□□□□□ -0.96
RUNDC3A-202ENST00000426726 SSPOA2VEC9 5147 aa9.05□□□□□ -0.96
RUNDC3A-202ENST00000426726 KRTAP10-12P60413 245 aa9.05□□□□□ -0.96
RUNDC3A-202ENST00000426726 LCE3AQ5TA76 89 aa9□□□□□ -0.97
RUNDC3A-202ENST00000426726 LUZP6Q538Z0 58 aa8.96□□□□□ -0.98
RUNDC3A-202ENST00000426726 SPRR5A0A1B0GTR4 108 aa8.85□□□□□ -0.99
RUNDC3A-202ENST00000426726 KRTAP8-1Q8IUC2 63 aa8.85□□□□□ -0.99
RUNDC3A-202ENST00000426726 KRTAP4-8A0A0G2JLE6 195 aa8.68□□□□□ -1.02
RUNDC3A-202ENST00000426726 KRTAP4-8Q9BYQ9 185 aa8.68□□□□□ -1.02
RUNDC3A-202ENST00000426726 KRTAP12-3P60328 96 aa8.66□□□□□ -1.02
RUNDC3A-202ENST00000426726 FCGBPQ9Y6R7 5405 aaPredicted RBP8.64□□□□□ -1.03
RUNDC3A-202ENST00000426726 A0A0A0MQY5 61 aa8.63□□□□□ -1.03
RUNDC3A-202ENST00000426726 KRTAP19-5Q3LI72 72 aa8.57□□□□□ -1.04
RUNDC3A-202ENST00000426726 KMT2DO14686 5537 aa8.54□□□□□ -1.04
RUNDC3A-202ENST00000426726 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.48□□□□□ -1.05
RUNDC3A-202ENST00000426726 KRTAP19-7Q3SYF9 63 aa8.45□□□□□ -1.06
RUNDC3A-202ENST00000426726 MACF1Q9UPN3 7388 aaKnown RBP8.34□□□□□ -1.07
RUNDC3A-202ENST00000426726 KRTAP9-7A8MTY7 169 aa8.33□□□□□ -1.08
RUNDC3A-202ENST00000426726 MT1EP04732 61 aa8.3□□□□□ -1.08
RUNDC3A-202ENST00000426726 SYNE2Q8WXH0 6885 aaKnown RBP8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms