RNA–Protein interactions for RNA: ENST00000425413.5

UBR4-207, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-207ENST00000425413 PRAC1Q96KF2 57 aa6.12□□□□□ -1.43
UBR4-207ENST00000425413 ADM2Q7Z4H4 148 aa6.1□□□□□ -1.43
UBR4-207ENST00000425413 MT1HL1P0DM35 61 aa6.06□□□□□ -1.44
UBR4-207ENST00000425413 XP32Q5T750 250 aa6.06□□□□□ -1.44
UBR4-207ENST00000425413 COX6B2Q6YFQ2 88 aa6.03□□□□□ -1.44
UBR4-207ENST00000425413 RPL37P61927 97 aaKnown RBP6.03□□□□□ -1.44
UBR4-207ENST00000425413 KRTAP4-5Q9BYR2 181 aa6□□□□□ -1.45
UBR4-207ENST00000425413 LRP2P98164 4655 aa5.98□□□□□ -1.45
UBR4-207ENST00000425413 LPAP08519 4548 aa5.98□□□□□ -1.45
UBR4-207ENST00000425413 A0A1B0GU33 70 aa5.96□□□□□ -1.46
UBR4-207ENST00000425413 ABCA13Q86UQ4 5058 aa5.96□□□□□ -1.46
UBR4-207ENST00000425413 H0YAA0 97 aa5.95□□□□□ -1.46
UBR4-207ENST00000425413 H1FX-AS1Q4G0G2 97 aa5.91□□□□□ -1.46
UBR4-207ENST00000425413 CSAG1Q6PB30 78 aa5.9□□□□□ -1.46
UBR4-207ENST00000425413 KRTAP3-3Q9BYR6 98 aa5.88□□□□□ -1.47
UBR4-207ENST00000425413 S4R3F8 94 aa5.86□□□□□ -1.47
UBR4-207ENST00000425413 TPRXLQ17RH7 258 aa5.82□□□□□ -1.48
UBR4-207ENST00000425413 LINC01554Q52M75 96 aa5.82□□□□□ -1.48
UBR4-207ENST00000425413 HERC2O95714 4834 aa5.79□□□□□ -1.48
UBR4-207ENST00000425413 A0A0D9SG42 100 aa5.79□□□□□ -1.48
UBR4-207ENST00000425413 J3QL48 77 aa5.79□□□□□ -1.48
UBR4-207ENST00000425413 CRIPTQ9P021 101 aa5.78□□□□□ -1.48
UBR4-207ENST00000425413 KRTAP10-6P60371 365 aaPredicted RBP5.78□□□□□ -1.48
UBR4-207ENST00000425413 K7ERS5 55 aa5.77□□□□□ -1.49
UBR4-207ENST00000425413 P0C880 135 aa5.77□□□□□ -1.49
UBR4-207ENST00000425413 KRTAP13-4Q3LI77 160 aa5.76□□□□□ -1.49
UBR4-207ENST00000425413 KRTAP3-2Q9BYR7 98 aa5.75□□□□□ -1.49
UBR4-207ENST00000425413 KRTAP25-1Q3LHN0 102 aa5.68□□□□□ -1.5
UBR4-207ENST00000425413 MUC2Q02817 5179 aa5.65□□□□□ -1.5
UBR4-207ENST00000425413 KRTAP4-1Q9BYQ7 146 aa5.65□□□□□ -1.51
UBR4-207ENST00000425413 SEC61BP60468 96 aaKnown RBP5.64□□□□□ -1.51
UBR4-207ENST00000425413 ROMO1P60602 79 aa5.61□□□□□ -1.51
UBR4-207ENST00000425413 BIRC6Q9NR09 4857 aa5.6□□□□□ -1.51
UBR4-207ENST00000425413 HERC1Q15751 4861 aa5.59□□□□□ -1.51
UBR4-207ENST00000425413 MUC17Q685J3 4493 aa5.58□□□□□ -1.52
UBR4-207ENST00000425413 SPINT4Q6UDR6 99 aa5.58□□□□□ -1.52
UBR4-207ENST00000425413 KRTAP12-2P59991 146 aa5.55□□□□□ -1.52
UBR4-207ENST00000425413 PCLOQ9Y6V0 5065 aa5.54□□□□□ -1.52
UBR4-207ENST00000425413 C10orf95Q9H7T3 257 aa5.52□□□□□ -1.53
UBR4-207ENST00000425413 M0QZ58 72 aa5.5□□□□□ -1.53
UBR4-207ENST00000425413 KRTAP12-1P59990 96 aa5.48□□□□□ -1.53
UBR4-207ENST00000425413 LORP23490 312 aaPredicted RBP5.47□□□□□ -1.53
UBR4-207ENST00000425413 R4GN34 69 aa5.47□□□□□ -1.53
UBR4-207ENST00000425413 KRTAP19-2Q3LHN2 52 aa5.43□□□□□ -1.54
UBR4-207ENST00000425413 HMCN2Q8NDA2 5059 aa5.41□□□□□ -1.54
UBR4-207ENST00000425413 FAT4Q6V0I7 4981 aa5.39□□□□□ -1.55
UBR4-207ENST00000425413 H3BS24 57 aa5.35□□□□□ -1.55
UBR4-207ENST00000425413 RNF213Q63HN8 5207 aa5.34□□□□□ -1.55
UBR4-207ENST00000425413 UBR4Q5T4S7 5183 aa5.3□□□□□ -1.56
UBR4-207ENST00000425413 FLGP20930 4061 aaPredicted RBP5.3□□□□□ -1.56
UBR4-207ENST00000425413 M0R2T5 61 aa5.21□□□□□ -1.58
UBR4-207ENST00000425413 CAMK2N1Q7Z7J9 78 aa5.2□□□□□ -1.58
UBR4-207ENST00000425413 LCE2CQ5TA81 110 aa5.2□□□□□ -1.58
UBR4-207ENST00000425413 KRTAP15-1Q3LI76 137 aa5.15□□□□□ -1.58
UBR4-207ENST00000425413 NDUFAF8A1L188 74 aa5.13□□□□□ -1.59
UBR4-207ENST00000425413 MT1HP80294 61 aa5.08□□□□□ -1.6
UBR4-207ENST00000425413 KRTAP10-10P60014 251 aa5.02□□□□□ -1.61
UBR4-207ENST00000425413 KRTAP19-1Q8IUB9 90 aa4.99□□□□□ -1.61
UBR4-207ENST00000425413 PLAC4Q8WY50 150 aa4.99□□□□□ -1.61
UBR4-207ENST00000425413 MT1FP04733 61 aa4.99□□□□□ -1.61
UBR4-207ENST00000425413 MT2AP02795 61 aa4.98□□□□□ -1.61
UBR4-207ENST00000425413 SPRR2GQ9BYE4 73 aa4.95□□□□□ -1.62
UBR4-207ENST00000425413 KRTAP9-8Q9BYQ0 159 aa4.93□□□□□ -1.62
UBR4-207ENST00000425413 TNP1P09430 55 aa4.91□□□□□ -1.62
UBR4-207ENST00000425413 PP632Q6XCG6 107 aa4.9□□□□□ -1.63
UBR4-207ENST00000425413 LUZP6Q538Z0 58 aa4.79□□□□□ -1.64
UBR4-207ENST00000425413 MT1BP07438 61 aa4.76□□□□□ -1.65
UBR4-207ENST00000425413 KRTAP19-8Q3LI54 63 aa4.74□□□□□ -1.65
UBR4-207ENST00000425413 LCE3AQ5TA76 89 aa4.72□□□□□ -1.65
UBR4-207ENST00000425413 KRTAP9-3Q9BYQ3 159 aa4.72□□□□□ -1.65
UBR4-207ENST00000425413 USH2AO75445 5202 aa4.72□□□□□ -1.65
UBR4-207ENST00000425413 MT1XP80297 61 aa4.69□□□□□ -1.66
UBR4-207ENST00000425413 KRTAP10-5P60370 271 aa4.68□□□□□ -1.66
UBR4-207ENST00000425413 KRTAP23-1A1A580 65 aa4.65□□□□□ -1.66
UBR4-207ENST00000425413 LCE2BO14633 110 aa4.6□□□□□ -1.67
UBR4-207ENST00000425413 KRTAP10-7P60409 375 aaPredicted RBP4.59□□□□□ -1.67
UBR4-207ENST00000425413 KRTAP10-12P60413 245 aa4.56□□□□□ -1.68
UBR4-207ENST00000425413 LCE2AQ5TA79 106 aaPredicted RBP4.56□□□□□ -1.68
UBR4-207ENST00000425413 A0A0A0MQY5 61 aa4.54□□□□□ -1.68
UBR4-207ENST00000425413 KMT2DO14686 5537 aa4.54□□□□□ -1.68
UBR4-207ENST00000425413 SPRR5A0A1B0GTR4 108 aa4.52□□□□□ -1.69
UBR4-207ENST00000425413 PRO2289Q9P1D8 64 aa4.51□□□□□ -1.69
UBR4-207ENST00000425413 KRTAP8-1Q8IUC2 63 aa4.5□□□□□ -1.69
UBR4-207ENST00000425413 KRTAP12-3P60328 96 aa4.48□□□□□ -1.69
UBR4-207ENST00000425413 FSIP2Q5CZC0 6907 aa4.44□□□□□ -1.7
UBR4-207ENST00000425413 KRTAP4-8A0A0G2JLE6 195 aa4.4□□□□□ -1.7
UBR4-207ENST00000425413 KRTAP4-8Q9BYQ9 185 aa4.4□□□□□ -1.7
UBR4-207ENST00000425413 KRTAP19-5Q3LI72 72 aa4.37□□□□□ -1.71
UBR4-207ENST00000425413 SSPOA2VEC9 5147 aa4.31□□□□□ -1.72
UBR4-207ENST00000425413 LCE3CQ5T5A8 94 aa4.18□□□□□ -1.74
UBR4-207ENST00000425413 KRTAP19-7Q3SYF9 63 aa4.17□□□□□ -1.74
UBR4-207ENST00000425413 KRTAP4-7Q9BYR0 210 aa4.17□□□□□ -1.74
UBR4-207ENST00000425413 KRTAP19-6Q3LI70 58 aa4.09□□□□□ -1.75
UBR4-207ENST00000425413 FCGBPQ9Y6R7 5405 aaPredicted RBP4.08□□□□□ -1.76
UBR4-207ENST00000425413 KRTAP9-6A8MVA2 160 aa4.07□□□□□ -1.76
UBR4-207ENST00000425413 MT1EP04732 61 aa4.06□□□□□ -1.76
UBR4-207ENST00000425413 MUC12Q9UKN1 5478 aa4.06□□□□□ -1.76
UBR4-207ENST00000425413 MT1LQ93083 61 aa4.04□□□□□ -1.76
UBR4-207ENST00000425413 INE1O15225 51 aa4□□□□□ -1.77
UBR4-207ENST00000425413 KRTAP4-3Q9BYR4 195 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 125.8 ms