RNA–Protein interactions for RNA: ENST00000425339.2

PPAT-202, Transcript of phosphoribosyl pyrophosphate amidotransferase, humanhuman

TSL 1 (best)

Gene PPAT, Length 4,043 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPAT-202ENST00000425339 APLNQ9ULZ1 77 aa2.47□□□□□ -2.01
PPAT-202ENST00000425339 HELZ2Q9BYK8 2649 aaKnown RBP2.46□□□□□ -2.02
PPAT-202ENST00000425339 A0A0D9SG42 100 aa2.46□□□□□ -2.02
PPAT-202ENST00000425339 NBEAL2Q6ZNJ1 2754 aa2.46□□□□□ -2.02
PPAT-202ENST00000425339 SPG11Q96JI7 2443 aa2.45□□□□□ -2.02
PPAT-202ENST00000425339 HIVEP2P31629 2446 aa2.45□□□□□ -2.02
PPAT-202ENST00000425339 SPTAN1Q13813 2472 aaKnown RBP2.44□□□□□ -2.02
PPAT-202ENST00000425339 KRTAP19-1Q8IUB9 90 aa2.44□□□□□ -2.02
PPAT-202ENST00000425339 KRTAP1-4P0C5Y4 121 aa2.44□□□□□ -2.02
PPAT-202ENST00000425339 ANKRD11Q6UB99 2663 aaPredicted RBP2.43□□□□□ -2.02
PPAT-202ENST00000425339 CCDC168Q8NDH2 2452 aa2.43□□□□□ -2.02
PPAT-202ENST00000425339 KRTAP4-9Q9BYQ8 210 aa2.43□□□□□ -2.02
PPAT-202ENST00000425339 KRTAP9-7A8MTY7 169 aa2.42□□□□□ -2.02
PPAT-202ENST00000425339 KRTAP1-1Q07627 177 aa2.42□□□□□ -2.02
PPAT-202ENST00000425339 F8P00451 2351 aa2.42□□□□□ -2.02
PPAT-202ENST00000425339 NBEAL1Q6ZS30 2694 aa2.41□□□□□ -2.02
PPAT-202ENST00000425339 HERC1Q15751 4861 aa2.41□□□□□ -2.02
PPAT-202ENST00000425339 PIEZO1Q92508 2521 aa2.41□□□□□ -2.02
PPAT-202ENST00000425339 CSPG4Q6UVK1 2322 aa2.4□□□□□ -2.02
PPAT-202ENST00000425339 TLN2Q9Y4G6 2542 aa2.4□□□□□ -2.03
PPAT-202ENST00000425339 LCE3BQ5TA77 95 aa2.4□□□□□ -2.03
PPAT-202ENST00000425339 TLN1Q9Y490 2541 aaKnown RBP2.39□□□□□ -2.03
PPAT-202ENST00000425339 LCE1DQ5T752 114 aa2.39□□□□□ -2.03
PPAT-202ENST00000425339 KRTAP4-2Q9BYR5 136 aa2.39□□□□□ -2.03
PPAT-202ENST00000425339 TGP01266 2768 aa2.39□□□□□ -2.03
PPAT-202ENST00000425339 CEP295Q9C0D2 2601 aa2.39□□□□□ -2.03
PPAT-202ENST00000425339 FLNCQ14315 2725 aa2.38□□□□□ -2.03
PPAT-202ENST00000425339 USP9XQ93008 2570 aaPredicted RBP2.38□□□□□ -2.03
PPAT-202ENST00000425339 JMJD1CQ15652 2540 aa2.37□□□□□ -2.03
PPAT-202ENST00000425339 CREBBPQ92793 2442 aa2.37□□□□□ -2.03
PPAT-202ENST00000425339 TEP1Q99973 2627 aaKnown RBP2.36□□□□□ -2.03
PPAT-202ENST00000425339 MYO18BQ8IUG5 2567 aa2.36□□□□□ -2.03
PPAT-202ENST00000425339 UNC79Q9P2D8 2635 aa2.35□□□□□ -2.03
PPAT-202ENST00000425339 KRTAP10-10P60014 251 aa2.35□□□□□ -2.03
PPAT-202ENST00000425339 NAV2Q8IVL1 2488 aa2.33□□□□□ -2.04
PPAT-202ENST00000425339 CENPEQ02224 2701 aa2.33□□□□□ -2.04
PPAT-202ENST00000425339 NOTCH2Q04721 2471 aa2.32□□□□□ -2.04
PPAT-202ENST00000425339 KRTAP10-11P60412 298 aa2.31□□□□□ -2.04
PPAT-202ENST00000425339 UBR4Q5T4S7 5183 aa2.3□□□□□ -2.04
PPAT-202ENST00000425339 TENM3Q9P273 2699 aa2.3□□□□□ -2.04
PPAT-202ENST00000425339 ZFYVE26Q68DK2 2539 aa2.3□□□□□ -2.04
PPAT-202ENST00000425339 FAM208BQ5VWN6 2430 aa2.3□□□□□ -2.04
PPAT-202ENST00000425339 USP9YO00507 2555 aaPredicted RBP2.29□□□□□ -2.04
PPAT-202ENST00000425339 RIF1Q5UIP0 2472 aaKnown RBP2.29□□□□□ -2.04
PPAT-202ENST00000425339 MUC2Q02817 5179 aa2.28□□□□□ -2.04
PPAT-202ENST00000425339 ITPR2Q14571 2701 aa2.28□□□□□ -2.04
PPAT-202ENST00000425339 KRTAP10-9P60411 292 aa2.27□□□□□ -2.05
PPAT-202ENST00000425339 KRTAP2-2Q9BYT5 123 aa2.27□□□□□ -2.05
PPAT-202ENST00000425339 CHD8Q9HCK8 2581 aa2.27□□□□□ -2.05
PPAT-202ENST00000425339 KRTAP4-5Q9BYR2 181 aa2.26□□□□□ -2.05
PPAT-202ENST00000425339 KRTAP4-11Q9BYQ6 195 aa2.26□□□□□ -2.05
PPAT-202ENST00000425339 SSPOA2VEC9 5147 aa2.25□□□□□ -2.05
PPAT-202ENST00000425339 DOPEY1Q5JWR5 2465 aa2.25□□□□□ -2.05
PPAT-202ENST00000425339 MYO9AB2RTY4 2548 aa2.24□□□□□ -2.05
PPAT-202ENST00000425339 MTORP42345 2549 aa2.23□□□□□ -2.05
PPAT-202ENST00000425339 TENM1Q9UKZ4 2725 aa2.23□□□□□ -2.05
PPAT-202ENST00000425339 KRTAP5-3Q6L8H2 238 aa2.22□□□□□ -2.05
PPAT-202ENST00000425339 MAST4O15021 2626 aa2.22□□□□□ -2.05
PPAT-202ENST00000425339 KRTAP10-12P60413 245 aa2.22□□□□□ -2.05
PPAT-202ENST00000425339 TTC28Q96AY4 2481 aa2.21□□□□□ -2.06
PPAT-202ENST00000425339 SETD2Q9BYW2 2564 aaPredicted RBP2.21□□□□□ -2.06
PPAT-202ENST00000425339 NSD1Q96L73 2696 aaPredicted RBP2.2□□□□□ -2.06
PPAT-202ENST00000425339 LPAP08519 4548 aa2.18□□□□□ -2.06
PPAT-202ENST00000425339 CEP290O15078 2479 aa2.18□□□□□ -2.06
PPAT-202ENST00000425339 KRTAP9-8Q9BYQ0 159 aa2.17□□□□□ -2.06
PPAT-202ENST00000425339 KRTAP2-3P0C7H8 128 aa2.16□□□□□ -2.06
PPAT-202ENST00000425339 KRTAP2-4Q9BYR9 128 aa2.16□□□□□ -2.06
PPAT-202ENST00000425339 KRTAP2-1Q9BYU5 128 aa2.16□□□□□ -2.06
PPAT-202ENST00000425339 TNP1P09430 55 aa2.15□□□□□ -2.07
PPAT-202ENST00000425339 C9orf92A6NGG3 77 aa2.14□□□□□ -2.07
PPAT-202ENST00000425339 KRTAP8-1Q8IUC2 63 aa2.14□□□□□ -2.07
PPAT-202ENST00000425339 SONP18583 2426 aaKnown RBP2.13□□□□□ -2.07
PPAT-202ENST00000425339 PKD1L2Q7Z442 2459 aa2.13□□□□□ -2.07
PPAT-202ENST00000425339 KRTAP9-3Q9BYQ3 159 aa2.13□□□□□ -2.07
PPAT-202ENST00000425339 LRRK2Q5S007 2527 aa2.12□□□□□ -2.07
PPAT-202ENST00000425339 KRTAP10-5P60370 271 aa2.12□□□□□ -2.07
PPAT-202ENST00000425339 STAB2Q8WWQ8 2551 aa2.11□□□□□ -2.07
PPAT-202ENST00000425339 KRTAP10-4P60372 401 aaPredicted RBP2.11□□□□□ -2.07
PPAT-202ENST00000425339 OBSCNQ5VST9 7968 aa2.11□□□□□ -2.07
PPAT-202ENST00000425339 KRTAP10-1P60331 282 aa2.1□□□□□ -2.07
PPAT-202ENST00000425339 LCE5AQ5TCM9 118 aa2.1□□□□□ -2.07
PPAT-202ENST00000425339 FLNAP21333 2647 aaKnown RBP2.09□□□□□ -2.07
PPAT-202ENST00000425339 RNF213Q63HN8 5207 aa2.08□□□□□ -2.08
PPAT-202ENST00000425339 USH2AO75445 5202 aa2.08□□□□□ -2.08
PPAT-202ENST00000425339 LCE3CQ5T5A8 94 aa2.08□□□□□ -2.08
PPAT-202ENST00000425339 ABCA12Q86UK0 2595 aa2.08□□□□□ -2.08
PPAT-202ENST00000425339 ATRQ13535 2644 aa2.07□□□□□ -2.08
PPAT-202ENST00000425339 NOTCH1P46531 2555 aa2.07□□□□□ -2.08
PPAT-202ENST00000425339 KRTAP6-3Q3LI67 103 aa2.05□□□□□ -2.08
PPAT-202ENST00000425339 KRTAP19-4Q3LI73 84 aa2.03□□□□□ -2.08
PPAT-202ENST00000425339 KRTAP19-2Q3LHN2 52 aa2.03□□□□□ -2.08
PPAT-202ENST00000425339 DMBT1Q9UGM3 2413 aaPredicted RBP2.02□□□□□ -2.09
PPAT-202ENST00000425339 FASNP49327 2511 aaKnown RBP2.01□□□□□ -2.09
PPAT-202ENST00000425339 LCE3AQ5TA76 89 aa2.01□□□□□ -2.09
PPAT-202ENST00000425339 ACANP16112 2415 aa2.01□□□□□ -2.09
PPAT-202ENST00000425339 KRTAP10-7P60409 375 aaPredicted RBP2□□□□□ -2.09
PPAT-202ENST00000425339 LCE1FQ5T754 118 aa1.99□□□□□ -2.09
PPAT-202ENST00000425339 FLNBO75369 2602 aaKnown RBP1.96□□□□□ -2.1
PPAT-202ENST00000425339 SMR3BP02814 79 aaPredicted RBP1.95□□□□□ -2.1
PPAT-202ENST00000425339 LCE3EQ5T5B0 92 aa1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms